RNA–Protein interactions for RNA: ENST00000400540.5

LINC00544-201, long intergenic non-protein coding RNA 544, humanhuman

TSL 5 BASIC

Gene LINC00544, Length 1,031 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-201ENST00000400540 CD1AP06126 327 aa9.04□□□□□ -0.96
LINC00544-201ENST00000400540 ACSM3Q53FZ2 586 aa9.04□□□□□ -0.96
LINC00544-201ENST00000400540 GLT8D1Q68CQ7 371 aa9.04□□□□□ -0.96
LINC00544-201ENST00000400540 LCN12Q6JVE5 192 aa9.04□□□□□ -0.96
LINC00544-201ENST00000400540 AHSA2Q719I0 299 aa9.04□□□□□ -0.96
LINC00544-201ENST00000400540 BVESQ8NE79 360 aa9.04□□□□□ -0.96
LINC00544-201ENST00000400540 KCNG3Q8TAE7 436 aa9.04□□□□□ -0.96
LINC00544-201ENST00000400540 TINAGL1Q9GZM7 467 aaPredicted RBP9.04□□□□□ -0.96
LINC00544-201ENST00000400540 LPAR5Q9H1C0 372 aa9.04□□□□□ -0.96
LINC00544-201ENST00000400540 WFDC10AQ9H1F0 79 aa9.04□□□□□ -0.96
LINC00544-201ENST00000400540 HIPK2Q9H2X6 1198 aa9.04□□□□□ -0.96
LINC00544-201ENST00000400540 SLC35D1Q9NTN3 355 aa9.04□□□□□ -0.96
LINC00544-201ENST00000400540 PEF1Q9UBV8 284 aaKnown RBP9.04□□□□□ -0.96
LINC00544-201ENST00000400540 CEPT1Q9Y6K0 416 aa9.04□□□□□ -0.96
LINC00544-201ENST00000400540 CRYGBP07316 175 aa9.03□□□□□ -0.96
LINC00544-201ENST00000400540 GNAO1P09471 354 aa9.03□□□□□ -0.96
LINC00544-201ENST00000400540 EDN2P20800 178 aa9.03□□□□□ -0.96
LINC00544-201ENST00000400540 CD81P60033 236 aa9.03□□□□□ -0.96
LINC00544-201ENST00000400540 P2RY14Q15391 338 aa9.03□□□□□ -0.96
LINC00544-201ENST00000400540 MRGPRG-AS1Q2M3A8 158 aa9.03□□□□□ -0.96
LINC00544-201ENST00000400540 MOGAT2Q3SYC2 334 aa9.03□□□□□ -0.96
LINC00544-201ENST00000400540 ZNF343Q6P1L6 599 aa9.03□□□□□ -0.96
LINC00544-201ENST00000400540 LINC00322Q6ZN03 302 aaPredicted RBP9.03□□□□□ -0.96
LINC00544-201ENST00000400540 Q8N402 240 aa9.03□□□□□ -0.96
LINC00544-201ENST00000400540 NANOGP1Q8N7R0 232 aa9.03□□□□□ -0.96
LINC00544-201ENST00000400540 SETD9Q8NE22 299 aa9.03□□□□□ -0.96
LINC00544-201ENST00000400540 THRSPQ92748 146 aa9.03□□□□□ -0.96
LINC00544-201ENST00000400540 PTX4Q96A99 478 aa9.03□□□□□ -0.96
LINC00544-201ENST00000400540 C5orf30Q96GV9 206 aa9.03□□□□□ -0.96
LINC00544-201ENST00000400540 GFI1Q99684 422 aa9.03□□□□□ -0.96
LINC00544-201ENST00000400540 Q9N2K0 584 aa9.03□□□□□ -0.96
LINC00544-201ENST00000400540 COA4Q9NYJ1 87 aa9.03□□□□□ -0.96
LINC00544-201ENST00000400540 RDH8Q9NYR8 311 aa9.03□□□□□ -0.96
LINC00544-201ENST00000400540 NKX1-2Q9UD57 310 aaPredicted RBP9.03□□□□□ -0.96
LINC00544-201ENST00000400540 PSORS1C1Q9UIG5 152 aa9.03□□□□□ -0.96
LINC00544-201ENST00000400540 ZNF221Q9UK13 617 aa9.03□□□□□ -0.96
LINC00544-201ENST00000400540 SHISA3A0PJX4 238 aa9.02□□□□□ -0.97
LINC00544-201ENST00000400540 FOXI3A8MTJ6 420 aaPredicted RBP9.02□□□□□ -0.97
LINC00544-201ENST00000400540 CD7P09564 240 aa9.02□□□□□ -0.97
LINC00544-201ENST00000400540 CD3GP09693 182 aa9.02□□□□□ -0.97
LINC00544-201ENST00000400540 MECP2P51608 486 aaKnown RBP9.02□□□□□ -0.97
LINC00544-201ENST00000400540 RPEL1Q2QD12 228 aa9.02□□□□□ -0.97
LINC00544-201ENST00000400540 TTC23Q5W5X9 447 aa9.02□□□□□ -0.97
LINC00544-201ENST00000400540 ARHGAP5-AS1Q96IT6 56 aa9.02□□□□□ -0.97
LINC00544-201ENST00000400540 HARBI1Q96MB7 349 aa9.02□□□□□ -0.97
LINC00544-201ENST00000400540 C12orf4Q9NQ89 552 aa9.02□□□□□ -0.97
LINC00544-201ENST00000400540 SIGLEC8Q9NYZ4 499 aa9.02□□□□□ -0.97
LINC00544-201ENST00000400540 RBMY1BA6NDE4 496 aaKnown RBP9.01□□□□□ -0.97
LINC00544-201ENST00000400540 RBMY1EA6NEQ0 496 aaKnown RBP9.01□□□□□ -0.97
LINC00544-201ENST00000400540 SRRM4A7MD48 611 aaKnown RBP9.01□□□□□ -0.97
LINC00544-201ENST00000400540 BMPR1BO00238 502 aa9.01□□□□□ -0.97
LINC00544-201ENST00000400540 BRI3O95415 125 aa9.01□□□□□ -0.97
LINC00544-201ENST00000400540 BPNT1O95861 308 aa9.01□□□□□ -0.97
LINC00544-201ENST00000400540 PRH1P02810 166 aa9.01□□□□□ -0.97
LINC00544-201ENST00000400540 RBMY1DP0C7P1 496 aaKnown RBP9.01□□□□□ -0.97
LINC00544-201ENST00000400540 AADACP22760 399 aa9.01□□□□□ -0.97
LINC00544-201ENST00000400540 LGALS7P47929 136 aa9.01□□□□□ -0.97
LINC00544-201ENST00000400540 TMEM50BP56557 158 aa9.01□□□□□ -0.97
LINC00544-201ENST00000400540 CD300EQ496F6 205 aaPredicted RBP9.01□□□□□ -0.97
LINC00544-201ENST00000400540 CEACAM19Q7Z692 300 aa9.01□□□□□ -0.97
LINC00544-201ENST00000400540 C10orf67Q8IYJ2 551 aa9.01□□□□□ -0.97
LINC00544-201ENST00000400540 DHRSXQ8N5I4 330 aa9.01□□□□□ -0.97
LINC00544-201ENST00000400540 DEFB125Q8N687 156 aa9.01□□□□□ -0.97
LINC00544-201ENST00000400540 ADAD2Q8NCV1 583 aaKnown RBP9.01□□□□□ -0.97
LINC00544-201ENST00000400540 BPIFB6Q8NFQ5 453 aa9.01□□□□□ -0.97
LINC00544-201ENST00000400540 OR6M1Q8NGM8 313 aa9.01□□□□□ -0.97
LINC00544-201ENST00000400540 PHYHIPQ92561 330 aa9.01□□□□□ -0.97
LINC00544-201ENST00000400540 PHB2Q99623 299 aa9.01□□□□□ -0.97
LINC00544-201ENST00000400540 NEURL2Q9BR09 285 aa9.01□□□□□ -0.97
LINC00544-201ENST00000400540 PECRQ9BY49 303 aa9.01□□□□□ -0.97
LINC00544-201ENST00000400540 OR2D2Q9H210 308 aa9.01□□□□□ -0.97
LINC00544-201ENST00000400540 RIMS4Q9H426 269 aaPredicted RBP9.01□□□□□ -0.97
LINC00544-201ENST00000400540 SDHAF2Q9NX18 166 aa9.01□□□□□ -0.97
LINC00544-201ENST00000400540 SELENOKQ9Y6D0 94 aa9.01□□□□□ -0.97
LINC00544-201ENST00000400540 HECTD4Q9Y4D8 3996 aa9.01□□□□□ -0.97
LINC00544-201ENST00000400540 HERC2O95714 4834 aa9□□□□□ -0.97
LINC00544-201ENST00000400540 MSGN1A6NI15 193 aa9□□□□□ -0.97
LINC00544-201ENST00000400540 ZNF785A8K8V0 405 aa9□□□□□ -0.97
LINC00544-201ENST00000400540 OR2A4O95047 310 aa9□□□□□ -0.97
LINC00544-201ENST00000400540 CD37P11049 281 aa9□□□□□ -0.97
LINC00544-201ENST00000400540 SRMP19623 302 aa9□□□□□ -0.97
LINC00544-201ENST00000400540 ZNF45Q02386 682 aa9□□□□□ -0.97
LINC00544-201ENST00000400540 PLA2G7Q13093 441 aa9□□□□□ -0.97
LINC00544-201ENST00000400540 HSD17B12Q53GQ0 312 aa9□□□□□ -0.97
LINC00544-201ENST00000400540 PLAC9Q5JTB6 97 aa9□□□□□ -0.97
LINC00544-201ENST00000400540 IDO2Q6ZQW0 420 aa9□□□□□ -0.97
LINC00544-201ENST00000400540 FAM89BQ8N5H3 189 aa9□□□□□ -0.97
LINC00544-201ENST00000400540 USMG5Q96IX5 58 aa9□□□□□ -0.97
LINC00544-201ENST00000400540 CMSS1Q9BQ75 279 aaKnown RBP9□□□□□ -0.97
LINC00544-201ENST00000400540 URM1Q9BTM9 101 aaKnown RBP9□□□□□ -0.97
LINC00544-201ENST00000400540 AKIP1Q9NQ31 210 aa9□□□□□ -0.97
LINC00544-201ENST00000400540 FKBP14Q9NWM8 211 aa9□□□□□ -0.97
LINC00544-201ENST00000400540 ZNF230Q9UIE0 474 aaPredicted RBP9□□□□□ -0.97
LINC00544-201ENST00000400540 HSF4Q9ULV5 492 aa9□□□□□ -0.97
LINC00544-201ENST00000400540 MGAT4AQ9UM21 535 aa9□□□□□ -0.97
LINC00544-201ENST00000400540 TRDCB7Z8K6 153 aa8.99□□□□□ -0.97
LINC00544-201ENST00000400540 BET1O15155 118 aa8.99□□□□□ -0.97
LINC00544-201ENST00000400540 SHOXO15266 292 aa8.99□□□□□ -0.97
LINC00544-201ENST00000400540 TPPPO94811 219 aa8.99□□□□□ -0.97
LINC00544-201ENST00000400540 UCHL1P09936 223 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms