RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 H2BFSP57053 126 aa9.59□□□□□ -0.87
SKA3-203ENST00000400018 GNB2P62879 340 aa9.59□□□□□ -0.87
SKA3-203ENST00000400018 ARL6IP1Q15041 203 aa9.59□□□□□ -0.87
SKA3-203ENST00000400018 SSX2Q16385 188 aa9.59□□□□□ -0.87
SKA3-203ENST00000400018 FOXRED2Q8IWF2 684 aa9.59□□□□□ -0.87
SKA3-203ENST00000400018 C11orf42Q8N5U0 333 aa9.59□□□□□ -0.87
SKA3-203ENST00000400018 RTN4IP1Q8WWV3 396 aaPredicted RBP9.59□□□□□ -0.87
SKA3-203ENST00000400018 MGAT4CQ9UBM8 478 aa9.59□□□□□ -0.87
SKA3-203ENST00000400018 KIR2DS1A0A191URI9 304 aa9.59□□□□□ -0.87
SKA3-203ENST00000400018 C9orf170A2RU37 121 aa9.59□□□□□ -0.87
SKA3-203ENST00000400018 C5orf52A6NGY3 159 aa9.59□□□□□ -0.87
SKA3-203ENST00000400018 CA11O75493 328 aa9.59□□□□□ -0.87
SKA3-203ENST00000400018 KIR2DS4P43632 304 aa9.59□□□□□ -0.87
SKA3-203ENST00000400018 SSBP1Q04837 148 aaKnown RBP9.59□□□□□ -0.87
SKA3-203ENST00000400018 HABP2Q14520 560 aaPredicted RBP9.59□□□□□ -0.87
SKA3-203ENST00000400018 KIR2DS1Q14954 304 aa9.59□□□□□ -0.87
SKA3-203ENST00000400018 ABCA11PQ4W5N1 156 aa9.59□□□□□ -0.87
SKA3-203ENST00000400018 CT45A1Q5HYN5 189 aa9.59□□□□□ -0.87
SKA3-203ENST00000400018 GSG1LQ6UXU4 331 aa9.59□□□□□ -0.87
SKA3-203ENST00000400018 TBC1D26Q86UD7 250 aa9.59□□□□□ -0.87
SKA3-203ENST00000400018 VKORC1L1Q8N0U8 176 aa9.59□□□□□ -0.87
SKA3-203ENST00000400018 ARRDC1Q8N5I2 433 aa9.59□□□□□ -0.87
SKA3-203ENST00000400018 OR4A4PQ8NGN8 299 aa9.59□□□□□ -0.87
SKA3-203ENST00000400018 CT45A3Q8NHU0 189 aa9.59□□□□□ -0.87
SKA3-203ENST00000400018 NEU4Q8WWR8 484 aaPredicted RBP9.59□□□□□ -0.87
SKA3-203ENST00000400018 RAB1CQ92928 201 aa9.59□□□□□ -0.87
SKA3-203ENST00000400018 MOB3AQ96BX8 217 aa9.59□□□□□ -0.87
SKA3-203ENST00000400018 C14orf79Q96F83 325 aa9.59□□□□□ -0.87
SKA3-203ENST00000400018 PIPOXQ9P0Z9 390 aa9.59□□□□□ -0.87
SKA3-203ENST00000400018 OR2W1Q9Y3N9 320 aa9.59□□□□□ -0.87
SKA3-203ENST00000400018 ZBTB25P24278 435 aa9.58□□□□□ -0.88
SKA3-203ENST00000400018 FABP9Q0Z7S8 132 aa9.58□□□□□ -0.88
SKA3-203ENST00000400018 MORN2Q502X0 79 aa9.58□□□□□ -0.88
SKA3-203ENST00000400018 DRAM1Q8N682 238 aa9.58□□□□□ -0.88
SKA3-203ENST00000400018 PPIAL4CA0A0B4J2A2 164 aa9.58□□□□□ -0.88
SKA3-203ENST00000400018 KBTBD11-OT1A0A1B0GTJ5 212 aa9.58□□□□□ -0.88
SKA3-203ENST00000400018 LINC00473A8K010 186 aa9.58□□□□□ -0.88
SKA3-203ENST00000400018 SPINT2O43291 252 aa9.58□□□□□ -0.88
SKA3-203ENST00000400018 PPIAL4GP0DN37 164 aa9.58□□□□□ -0.88
SKA3-203ENST00000400018 CGB3P0DN86 165 aa9.58□□□□□ -0.88
SKA3-203ENST00000400018 CGB7P0DN87 165 aa9.58□□□□□ -0.88
SKA3-203ENST00000400018 ZNF816Q0VGE8 651 aaPredicted RBP9.58□□□□□ -0.88
SKA3-203ENST00000400018 LDLRAD2Q5SZI1 272 aa9.58□□□□□ -0.88
SKA3-203ENST00000400018 LYG1Q8N1E2 194 aa9.58□□□□□ -0.88
SKA3-203ENST00000400018 SVBPQ8N300 66 aa9.58□□□□□ -0.88
SKA3-203ENST00000400018 FAM168AQ92567 244 aa9.58□□□□□ -0.88
SKA3-203ENST00000400018 TIMD4Q96H15 378 aa9.58□□□□□ -0.88
SKA3-203ENST00000400018 C14orf144Q96I85 54 aa9.58□□□□□ -0.88
SKA3-203ENST00000400018 PCGF1Q9BSM1 259 aa9.58□□□□□ -0.88
SKA3-203ENST00000400018 RHOFQ9HBH0 211 aa9.58□□□□□ -0.88
SKA3-203ENST00000400018 PPP1R14DQ9NXH3 145 aa9.58□□□□□ -0.88
SKA3-203ENST00000400018 SLC2A8Q9NY64 477 aa9.58□□□□□ -0.88
SKA3-203ENST00000400018 SETD2Q9BYW2 2564 aaPredicted RBP9.58□□□□□ -0.88
SKA3-203ENST00000400018 UBE2CO00762 179 aa9.57□□□□□ -0.88
SKA3-203ENST00000400018 ADCYAP1P18509 176 aa9.57□□□□□ -0.88
SKA3-203ENST00000400018 FPR2P25090 351 aa9.57□□□□□ -0.88
SKA3-203ENST00000400018 FBLN7Q53RD9 439 aa9.57□□□□□ -0.88
SKA3-203ENST00000400018 DHRS7BQ6IAN0 325 aaPredicted RBP9.57□□□□□ -0.88
SKA3-203ENST00000400018 C11orf88Q6PI97 169 aa9.57□□□□□ -0.88
SKA3-203ENST00000400018 LYZL2Q7Z4W2 148 aa9.57□□□□□ -0.88
SKA3-203ENST00000400018 SLC25A42Q86VD7 318 aa9.57□□□□□ -0.88
SKA3-203ENST00000400018 NINJ1Q92982 152 aa9.57□□□□□ -0.88
SKA3-203ENST00000400018 ZNF714Q96N38 554 aa9.57□□□□□ -0.88
SKA3-203ENST00000400018 FXYD6-FXYD2A0A087WZ82 144 aa9.57□□□□□ -0.88
SKA3-203ENST00000400018 DIRAS3O95661 229 aa9.57□□□□□ -0.88
SKA3-203ENST00000400018 RAB5BP61020 215 aa9.57□□□□□ -0.88
SKA3-203ENST00000400018 DHODHQ02127 395 aa9.57□□□□□ -0.88
SKA3-203ENST00000400018 SPAG16Q8N0X2 631 aa9.57□□□□□ -0.88
SKA3-203ENST00000400018 CIARTQ8N365 385 aaPredicted RBP9.57□□□□□ -0.88
SKA3-203ENST00000400018 OR8B3Q8NGG8 313 aa9.57□□□□□ -0.88
SKA3-203ENST00000400018 OR5D13Q8NGL4 314 aa9.57□□□□□ -0.88
SKA3-203ENST00000400018 PPP1R35Q8TAP8 253 aa9.57□□□□□ -0.88
SKA3-203ENST00000400018 C22orf15Q8WYQ4 148 aa9.57□□□□□ -0.88
SKA3-203ENST00000400018 OR8B2Q96RD0 313 aa9.57□□□□□ -0.88
SKA3-203ENST00000400018 SLC25A21Q9BQT8 299 aaPredicted RBP9.57□□□□□ -0.88
SKA3-203ENST00000400018 AGMATQ9BSE5 352 aa9.57□□□□□ -0.88
SKA3-203ENST00000400018 SSBP3Q9BWW4 388 aaPredicted RBP9.57□□□□□ -0.88
SKA3-203ENST00000400018 ZFP57Q9NU63 452 aa9.57□□□□□ -0.88
SKA3-203ENST00000400018 RPUSD1Q9UJJ7 312 aaKnown RBP9.57□□□□□ -0.88
SKA3-203ENST00000400018 C14orf166Q9Y224 244 aaKnown RBP9.57□□□□□ -0.88
SKA3-203ENST00000400018 DMRT1Q9Y5R6 373 aa9.57□□□□□ -0.88
SKA3-203ENST00000400018 TRBV6-6A0A0A6YYG2 114 aa9.56□□□□□ -0.88
SKA3-203ENST00000400018 RNF223E7ERA6 249 aa9.56□□□□□ -0.88
SKA3-203ENST00000400018 BRWD1-AS2P59051 145 aa9.56□□□□□ -0.88
SKA3-203ENST00000400018 LMO4P61968 165 aa9.56□□□□□ -0.88
SKA3-203ENST00000400018 RNF212Q495C1 297 aa9.56□□□□□ -0.88
SKA3-203ENST00000400018 ZNF626Q68DY1 528 aa9.56□□□□□ -0.88
SKA3-203ENST00000400018 CABLES2Q9BTV7 478 aa9.56□□□□□ -0.88
SKA3-203ENST00000400018 A0A0G2JRQ6 117 aa9.56□□□□□ -0.88
SKA3-203ENST00000400018 CREBL2O60519 120 aaPredicted RBP9.56□□□□□ -0.88
SKA3-203ENST00000400018 EPHA1P21709 976 aa9.56□□□□□ -0.88
SKA3-203ENST00000400018 CD34P28906 385 aa9.56□□□□□ -0.88
SKA3-203ENST00000400018 NPBWR1P48145 328 aa9.56□□□□□ -0.88
SKA3-203ENST00000400018 PPT1P50897 306 aa9.56□□□□□ -0.88
SKA3-203ENST00000400018 LUMP51884 338 aaPredicted RBP9.56□□□□□ -0.88
SKA3-203ENST00000400018 TMEM33P57088 247 aa9.56□□□□□ -0.88
SKA3-203ENST00000400018 TAS2R60P59551 318 aa9.56□□□□□ -0.88
SKA3-203ENST00000400018 SPCS3P61009 180 aa9.56□□□□□ -0.88
SKA3-203ENST00000400018 CLINT1Q14677 625 aa9.56□□□□□ -0.88
SKA3-203ENST00000400018 ACTBL2Q562R1 376 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms