RNA–Protein interactions for RNA: ENST00000399629.5

CACNA1C-213, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-213ENST00000399629 IGHV3-35A0A0C4DH35 117 aa10.35□□□□□ -0.75
CACNA1C-213ENST00000399629 COX5BP10606 129 aa10.35□□□□□ -0.75
CACNA1C-213ENST00000399629 TMEM183BQ1AE95 376 aa10.35□□□□□ -0.75
CACNA1C-213ENST00000399629 OR4C5Q8NGB2 326 aa10.35□□□□□ -0.75
CACNA1C-213ENST00000399629 DPM3Q9P2X0 92 aa10.35□□□□□ -0.75
CACNA1C-213ENST00000399629 TTRP02766 147 aa10.34□□□□□ -0.75
CACNA1C-213ENST00000399629 MUC1P15941 1255 aaPredicted RBP10.34□□□□□ -0.75
CACNA1C-213ENST00000399629 PMS2P11Q13670 270 aa10.34□□□□□ -0.75
CACNA1C-213ENST00000399629 BSXQ3C1V8 233 aa10.34□□□□□ -0.75
CACNA1C-213ENST00000399629 COX19Q49B96 90 aa10.34□□□□□ -0.75
CACNA1C-213ENST00000399629 ZPLD1Q8TCW7 415 aa10.34□□□□□ -0.75
CACNA1C-213ENST00000399629 TMEM45BQ96B21 275 aa10.34□□□□□ -0.75
CACNA1C-213ENST00000399629 SCARF2Q96GP6 870 aaPredicted RBP10.34□□□□□ -0.75
CACNA1C-213ENST00000399629 TBX15Q96SF7 602 aa10.34□□□□□ -0.75
CACNA1C-213ENST00000399629 NUP205Q92621 2012 aa10.34□□□□□ -0.75
CACNA1C-213ENST00000399629 POLR2AP24928 1970 aaKnown RBP10.34□□□□□ -0.75
CACNA1C-213ENST00000399629 ASAH2BP0C7U1 165 aa10.34□□□□□ -0.75
CACNA1C-213ENST00000399629 PGA5P0DJD9 388 aa10.34□□□□□ -0.75
CACNA1C-213ENST00000399629 RPS20P60866 119 aaKnown RBP10.34□□□□□ -0.75
CACNA1C-213ENST00000399629 ALKBH7Q9BT30 221 aaPredicted RBP10.34□□□□□ -0.75
CACNA1C-213ENST00000399629 VSIG8P0DPA2 414 aa10.34□□□□□ -0.75
CACNA1C-213ENST00000399629 IGSF11Q5DX21 431 aa10.34□□□□□ -0.75
CACNA1C-213ENST00000399629 RBKSQ9H477 322 aa10.34□□□□□ -0.75
CACNA1C-213ENST00000399629 PSMB11A5LHX3 300 aa10.34□□□□□ -0.75
CACNA1C-213ENST00000399629 ZNF253O75346 499 aa10.34□□□□□ -0.75
CACNA1C-213ENST00000399629 FUCA1P04066 466 aa10.34□□□□□ -0.75
CACNA1C-213ENST00000399629 CACNG7P62955 275 aa10.34□□□□□ -0.75
CACNA1C-213ENST00000399629 OR4A47Q6IF82 309 aa10.34□□□□□ -0.75
CACNA1C-213ENST00000399629 OPN4Q9UHM6 478 aa10.34□□□□□ -0.75
CACNA1C-213ENST00000399629 CELA3AP09093 270 aa10.34□□□□□ -0.75
CACNA1C-213ENST00000399629 SCTP09683 121 aa10.34□□□□□ -0.75
CACNA1C-213ENST00000399629 CD99P14209 185 aa10.34□□□□□ -0.75
CACNA1C-213ENST00000399629 OR13A1Q8NGR1 328 aa10.34□□□□□ -0.75
CACNA1C-213ENST00000399629 OR13C6PQ8NH95 151 aa10.34□□□□□ -0.75
CACNA1C-213ENST00000399629 SH3BGRL3Q9H299 93 aa10.34□□□□□ -0.75
CACNA1C-213ENST00000399629 PGPA6NDG6 321 aa10.33□□□□□ -0.76
CACNA1C-213ENST00000399629 H7C2G1 150 aa10.33□□□□□ -0.76
CACNA1C-213ENST00000399629 SULT1A2P50226 295 aa10.33□□□□□ -0.76
CACNA1C-213ENST00000399629 ZNF815PA8K554 130 aa10.33□□□□□ -0.76
CACNA1C-213ENST00000399629 EFEMP2O95967 443 aa10.33□□□□□ -0.76
CACNA1C-213ENST00000399629 CKS2P33552 79 aa10.33□□□□□ -0.76
CACNA1C-213ENST00000399629 LTBRP36941 435 aa10.33□□□□□ -0.76
CACNA1C-213ENST00000399629 PEAR1Q5VY43 1037 aaPredicted RBP10.33□□□□□ -0.76
CACNA1C-213ENST00000399629 ZIC4Q8N9L1 334 aa10.33□□□□□ -0.76
CACNA1C-213ENST00000399629 OR5AU1Q8NGC0 362 aa10.33□□□□□ -0.76
CACNA1C-213ENST00000399629 TNFRSF18Q9Y5U5 241 aa10.33□□□□□ -0.76
CACNA1C-213ENST00000399629 TMEM8BA6NDV4 472 aa10.33□□□□□ -0.76
CACNA1C-213ENST00000399629 MMP16P51512 607 aa10.33□□□□□ -0.76
CACNA1C-213ENST00000399629 DLL3Q9NYJ7 618 aa10.33□□□□□ -0.76
CACNA1C-213ENST00000399629 FBXL7Q9UJT9 491 aa10.33□□□□□ -0.76
CACNA1C-213ENST00000399629 KIAA1217Q5T5P2 1943 aa10.33□□□□□ -0.76
CACNA1C-213ENST00000399629 IGHV3-49A0A0A0MS15 119 aa10.33□□□□□ -0.76
CACNA1C-213ENST00000399629 TRAV34A0A0B4J273 112 aa10.33□□□□□ -0.76
CACNA1C-213ENST00000399629 LGALS3P17931 250 aaKnown RBP10.33□□□□□ -0.76
CACNA1C-213ENST00000399629 PTGDSP41222 190 aa10.33□□□□□ -0.76
CACNA1C-213ENST00000399629 HOGA1Q86XE5 327 aa10.33□□□□□ -0.76
CACNA1C-213ENST00000399629 IGHV3OR16-13A0A075B7E8 117 aa10.33□□□□□ -0.76
CACNA1C-213ENST00000399629 IGHV3-74A0A0B4J1X5 117 aa10.33□□□□□ -0.76
CACNA1C-213ENST00000399629 SUMO2P61956 95 aaKnown RBP10.33□□□□□ -0.76
CACNA1C-213ENST00000399629 ARPC1AQ92747 370 aa10.33□□□□□ -0.76
CACNA1C-213ENST00000399629 CTXND1A0A1B0GTU2 59 aa10.32□□□□□ -0.76
CACNA1C-213ENST00000399629 SUCLG1P53597 346 aaKnown RBP10.32□□□□□ -0.76
CACNA1C-213ENST00000399629 LDLRAD2Q5SZI1 272 aa10.32□□□□□ -0.76
CACNA1C-213ENST00000399629 MALP21145 153 aa10.32□□□□□ -0.76
CACNA1C-213ENST00000399629 RPL29P47914 159 aaKnown RBP10.32□□□□□ -0.76
CACNA1C-213ENST00000399629 GLIPR1P48060 266 aa10.32□□□□□ -0.76
CACNA1C-213ENST00000399629 CLEC19AQ6UXS0 136 aa10.32□□□□□ -0.76
CACNA1C-213ENST00000399629 SCN3AQ9NY46 2000 aa10.32□□□□□ -0.76
CACNA1C-213ENST00000399629 CROCCQ5TZA2 2017 aa10.32□□□□□ -0.76
CACNA1C-213ENST00000399629 H0Y980 276 aa10.32□□□□□ -0.76
CACNA1C-213ENST00000399629 TRGC1P0CF51 173 aa10.32□□□□□ -0.76
CACNA1C-213ENST00000399629 STAG3L2P0CL84 134 aa10.32□□□□□ -0.76
CACNA1C-213ENST00000399629 TMEM54Q969K7 222 aa10.32□□□□□ -0.76
CACNA1C-213ENST00000399629 SPSB2Q99619 263 aa10.32□□□□□ -0.76
CACNA1C-213ENST00000399629 NEU3Q9UQ49 428 aa10.32□□□□□ -0.76
CACNA1C-213ENST00000399629 IGKV1-8A0A0C4DH67 115 aa10.32□□□□□ -0.76
CACNA1C-213ENST00000399629 E9PLN8 166 aa10.32□□□□□ -0.76
CACNA1C-213ENST00000399629 SCGB1A1P11684 91 aa10.32□□□□□ -0.76
CACNA1C-213ENST00000399629 MARVELD3Q96A59 401 aa10.32□□□□□ -0.76
CACNA1C-213ENST00000399629 VKORC1Q9BQB6 163 aa10.32□□□□□ -0.76
CACNA1C-213ENST00000399629 CDS2O95674 445 aa10.32□□□□□ -0.76
CACNA1C-213ENST00000399629 CD74P04233 296 aa10.32□□□□□ -0.76
CACNA1C-213ENST00000399629 CECR9P0C854 216 aa10.32□□□□□ -0.76
CACNA1C-213ENST00000399629 FAM74A3Q4VXF1 159 aa10.32□□□□□ -0.76
CACNA1C-213ENST00000399629 RIPPLY2Q5TAB7 128 aa10.32□□□□□ -0.76
CACNA1C-213ENST00000399629 WNT5BQ9H1J7 359 aa10.32□□□□□ -0.76
CACNA1C-213ENST00000399629 CENPVL1A0A0U1RR11 272 aa10.31□□□□□ -0.76
CACNA1C-213ENST00000399629 M0QZK8 103 aa10.31□□□□□ -0.76
CACNA1C-213ENST00000399629 IGHV3-11P01762 117 aa10.31□□□□□ -0.76
CACNA1C-213ENST00000399629 CRPP02741 224 aa10.31□□□□□ -0.76
CACNA1C-213ENST00000399629 IER3P46695 156 aa10.31□□□□□ -0.76
CACNA1C-213ENST00000399629 CFAP161Q6P656 301 aa10.31□□□□□ -0.76
CACNA1C-213ENST00000399629 CADM3Q8N126 398 aa10.31□□□□□ -0.76
CACNA1C-213ENST00000399629 KLHDC2Q9Y2U9 406 aa10.31□□□□□ -0.76
CACNA1C-213ENST00000399629 MYO5AQ9Y4I1 1855 aaKnown RBP10.31□□□□□ -0.76
CACNA1C-213ENST00000399629 PITX3O75364 302 aa10.31□□□□□ -0.76
CACNA1C-213ENST00000399629 TDGF1P13385 188 aa10.31□□□□□ -0.76
CACNA1C-213ENST00000399629 SCN1AP35498 2009 aa10.31□□□□□ -0.76
CACNA1C-213ENST00000399629 FOXI3A8MTJ6 420 aaPredicted RBP10.31□□□□□ -0.76
CACNA1C-213ENST00000399629 IL4P05112 153 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms