RNA–Protein interactions for RNA: ENST00000399601.5

CACNA1C-208, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-208ENST00000399601 TPRX1Q8N7U7 411 aa9.66□□□□□ -0.86
CACNA1C-208ENST00000399601 PGPA6NDG6 321 aa9.66□□□□□ -0.86
CACNA1C-208ENST00000399601 HMGN4O00479 90 aa9.66□□□□□ -0.86
CACNA1C-208ENST00000399601 ATP1A1-AS1Q5TC04 95 aa9.66□□□□□ -0.86
CACNA1C-208ENST00000399601 OR9G4Q8NGQ1 327 aa9.66□□□□□ -0.86
CACNA1C-208ENST00000399601 VSTM2AQ8TAG5 236 aa9.66□□□□□ -0.86
CACNA1C-208ENST00000399601 CEACAM18A8MTB9 384 aa9.66□□□□□ -0.86
CACNA1C-208ENST00000399601 MDH2P40926 338 aaKnown RBP9.66□□□□□ -0.86
CACNA1C-208ENST00000399601 MDS2Q8NDY4 140 aa9.66□□□□□ -0.86
CACNA1C-208ENST00000399601 DOK1Q99704 481 aa9.66□□□□□ -0.86
CACNA1C-208ENST00000399601 SLC17A5Q9NRA2 495 aa9.66□□□□□ -0.86
CACNA1C-208ENST00000399601 TGIF2-C20orf24A0A0A6YYL0 155 aa9.66□□□□□ -0.86
CACNA1C-208ENST00000399601 H3BRM9 83 aa9.66□□□□□ -0.86
CACNA1C-208ENST00000399601 HMGCLL1Q8TB92 370 aa9.66□□□□□ -0.86
CACNA1C-208ENST00000399601 PXMP4Q9Y6I8 212 aa9.66□□□□□ -0.86
CACNA1C-208ENST00000399601 J3QR06 171 aa9.65□□□□□ -0.86
CACNA1C-208ENST00000399601 HYPMO75409 117 aa9.65□□□□□ -0.86
CACNA1C-208ENST00000399601 PNLIPP16233 465 aa9.65□□□□□ -0.86
CACNA1C-208ENST00000399601 CTAG1AP78358 180 aa9.65□□□□□ -0.86
CACNA1C-208ENST00000399601 TCEAL1Q15170 157 aa9.65□□□□□ -0.86
CACNA1C-208ENST00000399601 PRSS53Q2L4Q9 553 aa9.65□□□□□ -0.86
CACNA1C-208ENST00000399601 INO80CQ6PI98 192 aaPredicted RBP9.65□□□□□ -0.86
CACNA1C-208ENST00000399601 VAX2Q9UIW0 290 aa9.65□□□□□ -0.86
CACNA1C-208ENST00000399601 DHRS2Q13268 280 aa9.65□□□□□ -0.86
CACNA1C-208ENST00000399601 OCIAD2Q56VL3 154 aa9.65□□□□□ -0.86
CACNA1C-208ENST00000399601 PRSS54Q6PEW0 395 aa9.65□□□□□ -0.86
CACNA1C-208ENST00000399601 SCGB3A1Q96QR1 104 aa9.65□□□□□ -0.86
CACNA1C-208ENST00000399601 RASL10BQ96S79 203 aa9.65□□□□□ -0.86
CACNA1C-208ENST00000399601 ZNF430Q9H8G1 570 aaPredicted RBP9.65□□□□□ -0.86
CACNA1C-208ENST00000399601 HBZP02008 142 aa9.65□□□□□ -0.86
CACNA1C-208ENST00000399601 FAM214BQ7L5A3 538 aa9.65□□□□□ -0.86
CACNA1C-208ENST00000399601 ABHD17AQ96GS6 310 aa9.65□□□□□ -0.86
CACNA1C-208ENST00000399601 ANKRD12Q6UB98 2062 aa9.65□□□□□ -0.86
CACNA1C-208ENST00000399601 LOC105371242A0A075B767 164 aa9.65□□□□□ -0.86
CACNA1C-208ENST00000399601 SYNGR3O43761 229 aa9.65□□□□□ -0.86
CACNA1C-208ENST00000399601 TMEM50AO95807 157 aa9.65□□□□□ -0.86
CACNA1C-208ENST00000399601 CGB7P0DN87 165 aa9.65□□□□□ -0.86
CACNA1C-208ENST00000399601 FIZ1Q96SL8 496 aa9.65□□□□□ -0.86
CACNA1C-208ENST00000399601 CDCA4Q9BXL8 241 aa9.65□□□□□ -0.86
CACNA1C-208ENST00000399601 SLX4Q8IY92 1834 aa9.65□□□□□ -0.87
CACNA1C-208ENST00000399601 IGHV3-73A0A0B4J1V6 119 aa9.65□□□□□ -0.87
CACNA1C-208ENST00000399601 A0A1W2PS18 150 aa9.65□□□□□ -0.87
CACNA1C-208ENST00000399601 GGTLC3B5MD39 225 aa9.65□□□□□ -0.87
CACNA1C-208ENST00000399601 CDIPTO14735 213 aa9.65□□□□□ -0.87
CACNA1C-208ENST00000399601 NDUFB4O95168 129 aa9.65□□□□□ -0.87
CACNA1C-208ENST00000399601 TNFRSF6BO95407 300 aa9.65□□□□□ -0.87
CACNA1C-208ENST00000399601 TEPPQ6URK8 271 aa9.65□□□□□ -0.87
CACNA1C-208ENST00000399601 RARRES2Q99969 163 aa9.65□□□□□ -0.87
CACNA1C-208ENST00000399601 AICDAQ9GZX7 198 aa9.65□□□□□ -0.87
CACNA1C-208ENST00000399601 CCL28Q9NRJ3 127 aa9.65□□□□□ -0.87
CACNA1C-208ENST00000399601 TINAGQ9UJW2 476 aa9.65□□□□□ -0.87
CACNA1C-208ENST00000399601 TOGARAM1Q9Y4F4 1720 aa9.65□□□□□ -0.87
CACNA1C-208ENST00000399601 RCC1P18754 421 aaPredicted RBP9.65□□□□□ -0.87
CACNA1C-208ENST00000399601 LILRA6Q6PI73 481 aa9.65□□□□□ -0.87
CACNA1C-208ENST00000399601 LINC00615Q96LM1 132 aaPredicted RBP9.65□□□□□ -0.87
CACNA1C-208ENST00000399601 GDF15Q99988 308 aa9.65□□□□□ -0.87
CACNA1C-208ENST00000399601 ANKRD20A5PA0PJZ0 165 aa9.64□□□□□ -0.87
CACNA1C-208ENST00000399601 J3QKU1 62 aa9.64□□□□□ -0.87
CACNA1C-208ENST00000399601 SRIP30626 198 aa9.64□□□□□ -0.87
CACNA1C-208ENST00000399601 MRPL30Q8TCC3 161 aaKnown RBP9.64□□□□□ -0.87
CACNA1C-208ENST00000399601 UBR2Q8IWV8 1755 aa9.64□□□□□ -0.87
CACNA1C-208ENST00000399601 MYH9P35579 1960 aaKnown RBP9.64□□□□□ -0.87
CACNA1C-208ENST00000399601 C19orf67A6NJJ6 358 aa9.64□□□□□ -0.87
CACNA1C-208ENST00000399601 ADAD2Q8NCV1 583 aaKnown RBP9.64□□□□□ -0.87
CACNA1C-208ENST00000399601 BAALCQ8WXS3 180 aa9.64□□□□□ -0.87
CACNA1C-208ENST00000399601 GTF3AQ92664 365 aaKnown RBP9.64□□□□□ -0.87
CACNA1C-208ENST00000399601 TLNRD1Q9H1K6 362 aa9.64□□□□□ -0.87
CACNA1C-208ENST00000399601 SIRT4Q9Y6E7 314 aaPredicted RBP9.64□□□□□ -0.87
CACNA1C-208ENST00000399601 RBMY1FQ15415 496 aaKnown RBP9.64□□□□□ -0.87
CACNA1C-208ENST00000399601 TRAF4Q9BUZ4 470 aaPredicted RBP9.64□□□□□ -0.87
CACNA1C-208ENST00000399601 RCC2Q9P258 522 aaKnown RBP9.64□□□□□ -0.87
CACNA1C-208ENST00000399601 PLCH1Q4KWH8 1693 aa9.64□□□□□ -0.87
CACNA1C-208ENST00000399601 SSBP3Q9BWW4 388 aaPredicted RBP9.64□□□□□ -0.87
CACNA1C-208ENST00000399601 B9D1Q9UPM9 204 aa9.64□□□□□ -0.87
CACNA1C-208ENST00000399601 ADAMTSL3P82987 1691 aa9.64□□□□□ -0.87
CACNA1C-208ENST00000399601 TMEM186Q96B77 213 aa9.64□□□□□ -0.87
CACNA1C-208ENST00000399601 TMEM229AB2RXF0 380 aa9.63□□□□□ -0.87
CACNA1C-208ENST00000399601 H3BMM0 161 aa9.63□□□□□ -0.87
CACNA1C-208ENST00000399601 CCL3P10147 92 aa9.63□□□□□ -0.87
CACNA1C-208ENST00000399601 SNRPD3P62318 126 aaKnown RBP9.63□□□□□ -0.87
CACNA1C-208ENST00000399601 LEAP2Q969E1 77 aa9.63□□□□□ -0.87
CACNA1C-208ENST00000399601 UBE2WQ96B02 151 aa9.63□□□□□ -0.87
CACNA1C-208ENST00000399601 KCNS1Q96KK3 526 aa9.63□□□□□ -0.87
CACNA1C-208ENST00000399601 CLDN14O95500 239 aa9.63□□□□□ -0.87
CACNA1C-208ENST00000399601 NAPSAO96009 420 aa9.63□□□□□ -0.87
CACNA1C-208ENST00000399601 ISG15P05161 165 aa9.63□□□□□ -0.87
CACNA1C-208ENST00000399601 PLPPR5Q32ZL2 321 aa9.63□□□□□ -0.87
CACNA1C-208ENST00000399601 PIGYQ3MUY2 71 aa9.63□□□□□ -0.87
CACNA1C-208ENST00000399601 GGTLC1Q9BX51 225 aa9.63□□□□□ -0.87
CACNA1C-208ENST00000399601 LNP1A1A4G5 178 aa9.63□□□□□ -0.87
CACNA1C-208ENST00000399601 CISD3P0C7P0 127 aa9.63□□□□□ -0.87
CACNA1C-208ENST00000399601 SMIM19Q96E16 107 aa9.63□□□□□ -0.87
CACNA1C-208ENST00000399601 JPT2Q9H910 190 aa9.63□□□□□ -0.87
CACNA1C-208ENST00000399601 NPVFQ9HCQ7 196 aa9.63□□□□□ -0.87
CACNA1C-208ENST00000399601 ANAPC10Q9UM13 185 aa9.63□□□□□ -0.87
CACNA1C-208ENST00000399601 LSM4Q9Y4Z0 139 aaKnown RBP9.63□□□□□ -0.87
CACNA1C-208ENST00000399601 HLA-DRB1P01911 266 aa9.63□□□□□ -0.87
CACNA1C-208ENST00000399601 ZNF488Q96MN9 340 aa9.63□□□□□ -0.87
CACNA1C-208ENST00000399601 NABP2Q9BQ15 211 aa9.63□□□□□ -0.87
CACNA1C-208ENST00000399601 NKX2-6A6NCS4 301 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms