RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 TRGV4A0A0C4DH28 118 aa1.1□□□□□ -2.23
CD47-203ENST00000398258 A0A0J9YX75 114 aa1.1□□□□□ -2.23
CD47-203ENST00000398258 C5orf49A4QMS7 147 aa1.1□□□□□ -2.23
CD47-203ENST00000398258 OR6C6A6NF89 314 aa1.1□□□□□ -2.23
CD47-203ENST00000398258 TMEM235A6NFC5 223 aa1.1□□□□□ -2.23
CD47-203ENST00000398258 OR5K4A6NMS3 321 aa1.1□□□□□ -2.23
CD47-203ENST00000398258 UBFD1O14562 309 aaKnown RBP1.1□□□□□ -2.23
CD47-203ENST00000398258 SLC16A4O15374 487 aa1.1□□□□□ -2.23
CD47-203ENST00000398258 GSTZ1O43708 216 aaPredicted RBP1.1□□□□□ -2.23
CD47-203ENST00000398258 OCM2P0CE71 109 aa1.1□□□□□ -2.23
CD47-203ENST00000398258 CD24P25063 80 aa1.1□□□□□ -2.23
CD47-203ENST00000398258 BTN3A2P78410 334 aa1.1□□□□□ -2.23
CD47-203ENST00000398258 HLA-DRB3P79483 266 aa1.1□□□□□ -2.23
CD47-203ENST00000398258 GNA13Q14344 377 aa1.1□□□□□ -2.23
CD47-203ENST00000398258 UAP1Q16222 522 aaPredicted RBP1.1□□□□□ -2.23
CD47-203ENST00000398258 PLPPR5Q32ZL2 321 aa1.1□□□□□ -2.23
CD47-203ENST00000398258 HSP90B2PQ58FF3 399 aa1.1□□□□□ -2.23
CD47-203ENST00000398258 C1orf174Q8IYL3 243 aa1.1□□□□□ -2.23
CD47-203ENST00000398258 OR4K13Q8NH42 304 aa1.1□□□□□ -2.23
CD47-203ENST00000398258 CLDND2Q8NHS1 167 aa1.1□□□□□ -2.23
CD47-203ENST00000398258 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP1.1□□□□□ -2.23
CD47-203ENST00000398258 MGLLQ99685 303 aa1.1□□□□□ -2.23
CD47-203ENST00000398258 Q9BRP9 147 aa1.1□□□□□ -2.23
CD47-203ENST00000398258 DRC3Q9H069 523 aa1.1□□□□□ -2.23
CD47-203ENST00000398258 USE1Q9NZ43 259 aa1.1□□□□□ -2.23
CD47-203ENST00000398258 MINOS1-NBL1R4GNA1 71 aa1.1□□□□□ -2.23
CD47-203ENST00000398258 ICE1Q9Y2F5 2266 aa1.1□□□□□ -2.23
CD47-203ENST00000398258 MYO9BQ13459 2157 aa1.1□□□□□ -2.23
CD47-203ENST00000398258 REREQ9P2R6 1566 aa1.09□□□□□ -2.23
CD47-203ENST00000398258 OR11H12B2RN74 326 aa1.09□□□□□ -2.23
CD47-203ENST00000398258 CXCR6O00574 342 aa1.09□□□□□ -2.23
CD47-203ENST00000398258 SSNA1O43805 119 aa1.09□□□□□ -2.23
CD47-203ENST00000398258 DEXIO95424 95 aa1.09□□□□□ -2.23
CD47-203ENST00000398258 IGHV1-69P01742 117 aa1.09□□□□□ -2.23
CD47-203ENST00000398258 IL3P08700 152 aa1.09□□□□□ -2.23
CD47-203ENST00000398258 XCL1P47992 114 aa1.09□□□□□ -2.23
CD47-203ENST00000398258 CDC34P49427 236 aaPredicted RBP1.09□□□□□ -2.23
CD47-203ENST00000398258 RBM11P57052 281 aaKnown RBP1.09□□□□□ -2.23
CD47-203ENST00000398258 TMEM33P57088 247 aa1.09□□□□□ -2.23
CD47-203ENST00000398258 MAGOHP61326 146 aaKnown RBP1.09□□□□□ -2.23
CD47-203ENST00000398258 CDKL4Q5MAI5 379 aa1.09□□□□□ -2.23
CD47-203ENST00000398258 N4BP2L1Q5TBK1 243 aaPredicted RBP1.09□□□□□ -2.23
CD47-203ENST00000398258 CST9Q5W186 159 aa1.09□□□□□ -2.23
CD47-203ENST00000398258 AMTNQ6UX39 209 aa1.09□□□□□ -2.23
CD47-203ENST00000398258 LRRN1Q6UXK5 716 aa1.09□□□□□ -2.23
CD47-203ENST00000398258 C2orf91Q6ZV80 131 aa1.09□□□□□ -2.23
CD47-203ENST00000398258 LRRC34Q8IZ02 419 aa1.09□□□□□ -2.23
CD47-203ENST00000398258 CNEP1R1Q8N9A8 125 aa1.09□□□□□ -2.23
CD47-203ENST00000398258 TMEM161BQ8NDZ6 487 aa1.09□□□□□ -2.23
CD47-203ENST00000398258 OR11H2Q8NH07 326 aa1.09□□□□□ -2.23
CD47-203ENST00000398258 EEF1AKMT1Q8WVE0 214 aa1.09□□□□□ -2.23
CD47-203ENST00000398258 RNASE6Q93091 150 aaKnown RBP1.09□□□□□ -2.23
CD47-203ENST00000398258 TMEM106BQ9NUM4 274 aa1.09□□□□□ -2.23
CD47-203ENST00000398258 POLR1DQ9Y2S0 133 aa1.09□□□□□ -2.23
CD47-203ENST00000398258 MMACHCQ9Y4U1 282 aa1.09□□□□□ -2.23
CD47-203ENST00000398258 DOCK6Q96HP0 2047 aa1.09□□□□□ -2.24
CD47-203ENST00000398258 BAHCC1Q9P281 2608 aa1.09□□□□□ -2.24
CD47-203ENST00000398258 MYO16Q9Y6X6 1858 aa1.09□□□□□ -2.24
CD47-203ENST00000398258 OTOGLQ3ZCN5 2332 aa1.09□□□□□ -2.24
CD47-203ENST00000398258 ABCC12Q96J65 1359 aa1.08□□□□□ -2.24
CD47-203ENST00000398258 C9orf84Q5VXU9 1444 aa1.08□□□□□ -2.24
CD47-203ENST00000398258 A0A1B0GW54 56 aa1.08□□□□□ -2.24
CD47-203ENST00000398258 A0A1W2PQL4 384 aaPredicted RBP1.08□□□□□ -2.24
CD47-203ENST00000398258 C21orf140B9A014 251 aa1.08□□□□□ -2.24
CD47-203ENST00000398258 M0QZ92 97 aa1.08□□□□□ -2.24
CD47-203ENST00000398258 PFDN6O15212 129 aa1.08□□□□□ -2.24
CD47-203ENST00000398258 GNRH2O43555 120 aa1.08□□□□□ -2.24
CD47-203ENST00000398258 APOMO95445 188 aa1.08□□□□□ -2.24
CD47-203ENST00000398258 APOEP02649 317 aa1.08□□□□□ -2.24
CD47-203ENST00000398258 TYMSP04818 313 aa1.08□□□□□ -2.24
CD47-203ENST00000398258 ZNF728P0DKX0 622 aa1.08□□□□□ -2.24
CD47-203ENST00000398258 CD200P41217 278 aa1.08□□□□□ -2.24
CD47-203ENST00000398258 BLVRAP53004 296 aa1.08□□□□□ -2.24
CD47-203ENST00000398258 CTBP2P56545 445 aa1.08□□□□□ -2.24
CD47-203ENST00000398258 JOSD1Q15040 202 aaPredicted RBP1.08□□□□□ -2.24
CD47-203ENST00000398258 PCOTHQ58A44 107 aa1.08□□□□□ -2.24
CD47-203ENST00000398258 SBSNQ6UWP8 590 aa1.08□□□□□ -2.24
CD47-203ENST00000398258 NAA40Q86UY6 237 aa1.08□□□□□ -2.24
CD47-203ENST00000398258 BAP18Q8IXM2 172 aa1.08□□□□□ -2.24
CD47-203ENST00000398258 PIGXQ8TBF5 258 aa1.08□□□□□ -2.24
CD47-203ENST00000398258 SMCR5Q8TEV8 140 aa1.08□□□□□ -2.24
CD47-203ENST00000398258 RNF133Q8WVZ7 376 aa1.08□□□□□ -2.24
CD47-203ENST00000398258 ANKRD36BP1Q96IX9 119 aa1.08□□□□□ -2.24
CD47-203ENST00000398258 TMEM222Q9H0R3 208 aa1.08□□□□□ -2.24
CD47-203ENST00000398258 MAP1LC3AQ9H492 121 aa1.08□□□□□ -2.24
CD47-203ENST00000398258 PARVGQ9HBI0 331 aa1.08□□□□□ -2.24
CD47-203ENST00000398258 SLC2A9Q9NRM0 540 aa1.08□□□□□ -2.24
CD47-203ENST00000398258 PRO2289Q9P1D8 64 aa1.08□□□□□ -2.24
CD47-203ENST00000398258 V9GYY5 206 aaPredicted RBP1.08□□□□□ -2.24
CD47-203ENST00000398258 TRPM6Q9BX84 2022 aa1.08□□□□□ -2.24
CD47-203ENST00000398258 KIF15Q9NS87 1388 aa1.08□□□□□ -2.24
CD47-203ENST00000398258 DICER1Q9UPY3 1922 aaKnown RBP1.07□□□□□ -2.24
CD47-203ENST00000398258 A0A087WUU8 490 aa1.07□□□□□ -2.24
CD47-203ENST00000398258 TMED7-TICAM2A0A0A6YYA0 188 aa1.07□□□□□ -2.24
CD47-203ENST00000398258 DISC1C4P0D8 188 aa1.07□□□□□ -2.24
CD47-203ENST00000398258 C9JCJ5 164 aa1.07□□□□□ -2.24
CD47-203ENST00000398258 LRRN3E7EW58 273 aa1.07□□□□□ -2.24
CD47-203ENST00000398258 H0Y980 276 aa1.07□□□□□ -2.24
CD47-203ENST00000398258 TRAPPC3O43617 180 aa1.07□□□□□ -2.24
CD47-203ENST00000398258 CD36P16671 472 aa1.07□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms