RNA–Protein interactions for RNA: ENST00000397942.3

SOCS6-201, Transcript of suppressor of cytokine signaling 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS6, Length 5,848 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS6-201ENST00000397942 FLYWCH2Q96CP2 140 aaKnown RBP10.64□□□□□ -0.71
SOCS6-201ENST00000397942 PARD6AQ9NPB6 346 aa10.64□□□□□ -0.71
SOCS6-201ENST00000397942 TRAV34A0A0B4J273 112 aa10.64□□□□□ -0.71
SOCS6-201ENST00000397942 FAM166AQ6J272 317 aa10.64□□□□□ -0.71
SOCS6-201ENST00000397942 NDFIP1Q9BT67 221 aa10.64□□□□□ -0.71
SOCS6-201ENST00000397942 TIMM9Q9Y5J7 89 aa10.64□□□□□ -0.71
SOCS6-201ENST00000397942 ZNF646O15015 1829 aaPredicted RBP10.64□□□□□ -0.71
SOCS6-201ENST00000397942 ATP1A1-AS1Q5TC04 95 aa10.63□□□□□ -0.71
SOCS6-201ENST00000397942 MRPL54Q6P161 138 aaKnown RBP10.63□□□□□ -0.71
SOCS6-201ENST00000397942 TMEM204Q9BSN7 226 aa10.63□□□□□ -0.71
SOCS6-201ENST00000397942 DDA1Q9BW61 102 aa10.63□□□□□ -0.71
SOCS6-201ENST00000397942 C16orf97H3BN30 126 aa10.63□□□□□ -0.71
SOCS6-201ENST00000397942 GLIPR1P48060 266 aa10.63□□□□□ -0.71
SOCS6-201ENST00000397942 REG1BP48304 166 aa10.63□□□□□ -0.71
SOCS6-201ENST00000397942 SPCS3P61009 180 aa10.63□□□□□ -0.71
SOCS6-201ENST00000397942 TNFRSF9Q07011 255 aa10.63□□□□□ -0.71
SOCS6-201ENST00000397942 SIGLEC12Q96PQ1 595 aa10.63□□□□□ -0.71
SOCS6-201ENST00000397942 OR2V2Q96R30 315 aa10.63□□□□□ -0.71
SOCS6-201ENST00000397942 SORL1Q92673 2214 aa10.63□□□□□ -0.71
SOCS6-201ENST00000397942 MARCH11A6NNE9 402 aa10.63□□□□□ -0.71
SOCS6-201ENST00000397942 FAM90A26D6RGX4 464 aa10.63□□□□□ -0.71
SOCS6-201ENST00000397942 RAB29O14966 203 aa10.63□□□□□ -0.71
SOCS6-201ENST00000397942 CTSSP25774 331 aa10.63□□□□□ -0.71
SOCS6-201ENST00000397942 ETFRF1Q6IPR1 90 aa10.63□□□□□ -0.71
SOCS6-201ENST00000397942 OR8G5Q8NG78 346 aa10.63□□□□□ -0.71
SOCS6-201ENST00000397942 ARL2-SNX15V9GYD0 113 aa10.63□□□□□ -0.71
SOCS6-201ENST00000397942 NAV2Q8IVL1 2488 aa10.63□□□□□ -0.71
SOCS6-201ENST00000397942 SIP14410 1827 aa10.63□□□□□ -0.71
SOCS6-201ENST00000397942 IGKV1D-8A0A087WSZ0 117 aa10.63□□□□□ -0.71
SOCS6-201ENST00000397942 SERTM2A0A1B0GWG4 89 aa10.63□□□□□ -0.71
SOCS6-201ENST00000397942 A0A1W2PRD5 423 aa10.63□□□□□ -0.71
SOCS6-201ENST00000397942 A0A1W2PRF3 423 aa10.63□□□□□ -0.71
SOCS6-201ENST00000397942 A0A1W2PRM7 423 aa10.63□□□□□ -0.71
SOCS6-201ENST00000397942 NCBP2LA6PVI3 153 aaKnown RBP10.63□□□□□ -0.71
SOCS6-201ENST00000397942 CYB5R3P00387 301 aaPredicted RBP10.63□□□□□ -0.71
SOCS6-201ENST00000397942 THADAQ6YHU6 1953 aa10.62□□□□□ -0.71
SOCS6-201ENST00000397942 IGSF23A1L1A6 192 aa10.62□□□□□ -0.71
SOCS6-201ENST00000397942 PDE6DO43924 150 aa10.62□□□□□ -0.71
SOCS6-201ENST00000397942 MPDU1O75352 247 aa10.62□□□□□ -0.71
SOCS6-201ENST00000397942 HOXB1P14653 301 aaPredicted RBP10.62□□□□□ -0.71
SOCS6-201ENST00000397942 OR5I1Q13606 314 aa10.62□□□□□ -0.71
SOCS6-201ENST00000397942 SLC24A4Q8NFF2 622 aa10.62□□□□□ -0.71
SOCS6-201ENST00000397942 VOPP1Q96AW1 172 aa10.62□□□□□ -0.71
SOCS6-201ENST00000397942 GNB4Q9HAV0 340 aa10.62□□□□□ -0.71
SOCS6-201ENST00000397942 PRR33A8MZF0 331 aa10.62□□□□□ -0.71
SOCS6-201ENST00000397942 UMODP07911 640 aa10.62□□□□□ -0.71
SOCS6-201ENST00000397942 DPPA3Q6W0C5 159 aa10.62□□□□□ -0.71
SOCS6-201ENST00000397942 FADS6Q8N9I5 356 aa10.62□□□□□ -0.71
SOCS6-201ENST00000397942 ITLN1Q8WWA0 313 aa10.62□□□□□ -0.71
SOCS6-201ENST00000397942 CCL13Q99616 98 aa10.62□□□□□ -0.71
SOCS6-201ENST00000397942 CARHSP1Q9Y2V2 147 aaKnown RBP10.62□□□□□ -0.71
SOCS6-201ENST00000397942 LNP1A1A4G5 178 aa10.62□□□□□ -0.71
SOCS6-201ENST00000397942 SNURFLB1AK76 121 aa10.62□□□□□ -0.71
SOCS6-201ENST00000397942 PROB1E7EW31 1015 aa10.62□□□□□ -0.71
SOCS6-201ENST00000397942 RHBDL1O75783 438 aa10.62□□□□□ -0.71
SOCS6-201ENST00000397942 FAM3BP58499 235 aaPredicted RBP10.62□□□□□ -0.71
SOCS6-201ENST00000397942 ARL16Q0P5N6 197 aa10.62□□□□□ -0.71
SOCS6-201ENST00000397942 TNXAQ16473 311 aa10.62□□□□□ -0.71
SOCS6-201ENST00000397942 RCC1LQ96I51 464 aaKnown RBP10.62□□□□□ -0.71
SOCS6-201ENST00000397942 INSIG2Q9Y5U4 225 aa10.62□□□□□ -0.71
SOCS6-201ENST00000397942 ZG16O60844 167 aa10.62□□□□□ -0.71
SOCS6-201ENST00000397942 KLF7O75840 302 aaPredicted RBP10.62□□□□□ -0.71
SOCS6-201ENST00000397942 RANP62826 216 aaKnown RBP10.62□□□□□ -0.71
SOCS6-201ENST00000397942 VAMP3Q15836 100 aa10.62□□□□□ -0.71
SOCS6-201ENST00000397942 SPNS3Q6ZMD2 512 aa10.62□□□□□ -0.71
SOCS6-201ENST00000397942 LOC102723996A0A087X1L8 192 aa10.62□□□□□ -0.71
SOCS6-201ENST00000397942 A0A0G2JMM0 328 aa10.62□□□□□ -0.71
SOCS6-201ENST00000397942 A0A1W2PPB8 328 aa10.62□□□□□ -0.71
SOCS6-201ENST00000397942 A0A1W2PRS3 328 aa10.62□□□□□ -0.71
SOCS6-201ENST00000397942 KIR3DP1A8MWS1 328 aa10.62□□□□□ -0.71
SOCS6-201ENST00000397942 AHRRA9YTQ3 701 aa10.62□□□□□ -0.71
SOCS6-201ENST00000397942 PPIHO43447 177 aaKnown RBP10.62□□□□□ -0.71
SOCS6-201ENST00000397942 IER3P46695 156 aa10.62□□□□□ -0.71
SOCS6-201ENST00000397942 HNRNPA3P51991 378 aaKnown RBP10.62□□□□□ -0.71
SOCS6-201ENST00000397942 HIST3H3Q16695 136 aa10.61□□□□□ -0.71
SOCS6-201ENST00000397942 COX19Q49B96 90 aa10.61□□□□□ -0.71
SOCS6-201ENST00000397942 WDR25Q64LD2 544 aaPredicted RBP10.61□□□□□ -0.71
SOCS6-201ENST00000397942 LINC00470Q9BZP3 86 aa10.61□□□□□ -0.71
SOCS6-201ENST00000397942 CLDN16Q9Y5I7 305 aa10.61□□□□□ -0.71
SOCS6-201ENST00000397942 PXMP4Q9Y6I8 212 aa10.61□□□□□ -0.71
SOCS6-201ENST00000397942 PRRX1P54821 245 aa10.61□□□□□ -0.71
SOCS6-201ENST00000397942 WDR73Q6P4I2 378 aa10.61□□□□□ -0.71
SOCS6-201ENST00000397942 SMIM8Q96KF7 97 aa10.61□□□□□ -0.71
SOCS6-201ENST00000397942 AAMDCQ9H7C9 122 aa10.61□□□□□ -0.71
SOCS6-201ENST00000397942 CEP350Q5VT06 3117 aa10.61□□□□□ -0.71
SOCS6-201ENST00000397942 FAM90A27PA6NNH2 459 aa10.61□□□□□ -0.71
SOCS6-201ENST00000397942 CXorf1O96002 111 aa10.61□□□□□ -0.71
SOCS6-201ENST00000397942 OR4X1Q8NH49 305 aa10.61□□□□□ -0.71
SOCS6-201ENST00000397942 IL19Q9UHD0 177 aa10.61□□□□□ -0.71
SOCS6-201ENST00000397942 PTGDSP41222 190 aa10.61□□□□□ -0.71
SOCS6-201ENST00000397942 SLC35B1P78383 322 aa10.61□□□□□ -0.71
SOCS6-201ENST00000397942 MIC13Q5XKP0 118 aa10.61□□□□□ -0.71
SOCS6-201ENST00000397942 RNASEKQ6P5S7 137 aaKnown RBP10.61□□□□□ -0.71
SOCS6-201ENST00000397942 WBP1Q96G27 269 aa10.61□□□□□ -0.71
SOCS6-201ENST00000397942 PCGF1Q9BSM1 259 aa10.61□□□□□ -0.71
SOCS6-201ENST00000397942 RBKSQ9H477 322 aa10.61□□□□□ -0.71
SOCS6-201ENST00000397942 PLSCR2Q9NRY7 297 aa10.61□□□□□ -0.71
SOCS6-201ENST00000397942 IL36RNQ9UBH0 155 aa10.61□□□□□ -0.71
SOCS6-201ENST00000397942 DNASE2O00115 360 aaPredicted RBP10.6□□□□□ -0.71
SOCS6-201ENST00000397942 FCER1GP30273 86 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms