RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 REPIN1Q9BWE0 567 aaKnown RBP7.76□□□□□ -1.17
CAPN3-206ENST00000397163 TMEM9BQ9NQ34 198 aa7.76□□□□□ -1.17
CAPN3-206ENST00000397163 TMEM106BQ9NUM4 274 aa7.76□□□□□ -1.17
CAPN3-206ENST00000397163 OCIAD1Q9NX40 245 aa7.76□□□□□ -1.17
CAPN3-206ENST00000397163 TRIOO75962 3097 aa7.76□□□□□ -1.17
CAPN3-206ENST00000397163 IGHV1-45A0A0A0MS14 117 aa7.76□□□□□ -1.17
CAPN3-206ENST00000397163 C1QTNF9BB2RNN3 333 aa7.76□□□□□ -1.17
CAPN3-206ENST00000397163 PAGE4O60829 102 aa7.76□□□□□ -1.17
CAPN3-206ENST00000397163 TDGF1P13385 188 aa7.76□□□□□ -1.17
CAPN3-206ENST00000397163 ADMP35318 185 aa7.76□□□□□ -1.17
CAPN3-206ENST00000397163 HLA-BQ31612 363 aa7.76□□□□□ -1.17
CAPN3-206ENST00000397163 RIPPLY2Q5TAB7 128 aa7.76□□□□□ -1.17
CAPN3-206ENST00000397163 LIN7CQ9NUP9 197 aaKnown RBP7.76□□□□□ -1.17
CAPN3-206ENST00000397163 LOC105371242A0A075B767 164 aa7.75□□□□□ -1.17
CAPN3-206ENST00000397163 LNP1A1A4G5 178 aa7.75□□□□□ -1.17
CAPN3-206ENST00000397163 LRP5LA4QPB2 252 aa7.75□□□□□ -1.17
CAPN3-206ENST00000397163 PDGFBP01127 241 aaPredicted RBP7.75□□□□□ -1.17
CAPN3-206ENST00000397163 SRP14P37108 136 aaKnown RBP7.75□□□□□ -1.17
CAPN3-206ENST00000397163 RPS16P62249 146 aaKnown RBP7.75□□□□□ -1.17
CAPN3-206ENST00000397163 SELENOTP62341 195 aa7.75□□□□□ -1.17
CAPN3-206ENST00000397163 CENPVQ7Z7K6 275 aaPredicted RBP7.75□□□□□ -1.17
CAPN3-206ENST00000397163 GGNQ86UU5 652 aa7.75□□□□□ -1.17
CAPN3-206ENST00000397163 ST6GALNAC3Q8NDV1 305 aa7.75□□□□□ -1.17
CAPN3-206ENST00000397163 NEIL1Q96FI4 390 aaPredicted RBP7.75□□□□□ -1.17
CAPN3-206ENST00000397163 TXN2Q99757 166 aa7.75□□□□□ -1.17
CAPN3-206ENST00000397163 PCED1AQ9H1Q7 454 aa7.75□□□□□ -1.17
CAPN3-206ENST00000397163 ZNF552Q9H707 407 aaPredicted RBP7.75□□□□□ -1.17
CAPN3-206ENST00000397163 TRAV24A0A0B4J272 114 aa7.75□□□□□ -1.17
CAPN3-206ENST00000397163 A0A0G2JMM0 328 aa7.75□□□□□ -1.17
CAPN3-206ENST00000397163 A0A1W2PPB8 328 aa7.75□□□□□ -1.17
CAPN3-206ENST00000397163 A0A1W2PRS3 328 aa7.75□□□□□ -1.17
CAPN3-206ENST00000397163 NKX6-3A6NJ46 265 aa7.75□□□□□ -1.17
CAPN3-206ENST00000397163 KIR3DP1A8MWS1 328 aa7.75□□□□□ -1.17
CAPN3-206ENST00000397163 SRD5A2P31213 254 aa7.75□□□□□ -1.17
CAPN3-206ENST00000397163 CDKN1BP46527 198 aa7.75□□□□□ -1.17
CAPN3-206ENST00000397163 B3GALT5-AS1P59052 145 aa7.75□□□□□ -1.17
CAPN3-206ENST00000397163 ZNF585BQ52M93 769 aa7.75□□□□□ -1.17
CAPN3-206ENST00000397163 WIPI1Q5MNZ9 446 aaPredicted RBP7.75□□□□□ -1.17
CAPN3-206ENST00000397163 FFAR4Q5NUL3 377 aa7.75□□□□□ -1.17
CAPN3-206ENST00000397163 Q6ZN92 141 aa7.75□□□□□ -1.17
CAPN3-206ENST00000397163 KCNE4Q8WWG9 221 aa7.75□□□□□ -1.17
CAPN3-206ENST00000397163 IMMP1LQ96LU5 166 aa7.75□□□□□ -1.17
CAPN3-206ENST00000397163 MRPS17Q9Y2R5 130 aaKnown RBP7.75□□□□□ -1.17
CAPN3-206ENST00000397163 TIMM9Q9Y5J7 89 aa7.75□□□□□ -1.17
CAPN3-206ENST00000397163 DEGS1O15121 323 aa7.74□□□□□ -1.17
CAPN3-206ENST00000397163 SERF1AO75920 110 aa7.74□□□□□ -1.17
CAPN3-206ENST00000397163 P04436 131 aa7.74□□□□□ -1.17
CAPN3-206ENST00000397163 COX6A1P12074 109 aa7.74□□□□□ -1.17
CAPN3-206ENST00000397163 ARF1P84077 181 aaKnown RBP7.74□□□□□ -1.17
CAPN3-206ENST00000397163 COLCA1Q6ZS62 124 aa7.74□□□□□ -1.17
CAPN3-206ENST00000397163 MCEMP1Q8IX19 187 aa7.74□□□□□ -1.17
CAPN3-206ENST00000397163 ZPBPQ9BS86 351 aa7.74□□□□□ -1.17
CAPN3-206ENST00000397163 SAMD10Q9BYL1 202 aa7.74□□□□□ -1.17
CAPN3-206ENST00000397163 DLL3Q9NYJ7 618 aa7.74□□□□□ -1.17
CAPN3-206ENST00000397163 TP73-AS1Q9UF72 201 aa7.74□□□□□ -1.17
CAPN3-206ENST00000397163 ITGB1BP1O14713 200 aa7.74□□□□□ -1.17
CAPN3-206ENST00000397163 SH2D1BO14796 132 aa7.74□□□□□ -1.17
CAPN3-206ENST00000397163 CRYAAP02489 173 aa7.74□□□□□ -1.17
CAPN3-206ENST00000397163 SOX8P57073 446 aa7.74□□□□□ -1.17
CAPN3-206ENST00000397163 FAM58AQ8N1B3 248 aa7.74□□□□□ -1.17
CAPN3-206ENST00000397163 FGFRL1Q8N441 504 aa7.74□□□□□ -1.17
CAPN3-206ENST00000397163 C20orf144Q9BQM9 153 aa7.74□□□□□ -1.17
CAPN3-206ENST00000397163 TRAPPC2LQ9UL33 140 aa7.74□□□□□ -1.17
CAPN3-206ENST00000397163 SELENOKQ9Y6D0 94 aa7.74□□□□□ -1.17
CAPN3-206ENST00000397163 LOC102723996A0A087X1L8 192 aa7.74□□□□□ -1.17
CAPN3-206ENST00000397163 MRPL33O75394 65 aaKnown RBP7.74□□□□□ -1.17
CAPN3-206ENST00000397163 IGLV2-14P01704 120 aa7.74□□□□□ -1.17
CAPN3-206ENST00000397163 TYMSP04818 313 aa7.74□□□□□ -1.17
CAPN3-206ENST00000397163 RFPL3SP0C7P2 107 aa7.74□□□□□ -1.17
CAPN3-206ENST00000397163 COX5AP20674 150 aa7.74□□□□□ -1.17
CAPN3-206ENST00000397163 CBLN1P23435 193 aa7.74□□□□□ -1.17
CAPN3-206ENST00000397163 PPP1CBP62140 327 aa7.74□□□□□ -1.17
CAPN3-206ENST00000397163 SPATA45Q537H7 98 aa7.74□□□□□ -1.17
CAPN3-206ENST00000397163 TMEM14EPQ6UXP3 125 aa7.74□□□□□ -1.17
CAPN3-206ENST00000397163 TEX43Q6ZNM6 134 aa7.74□□□□□ -1.17
CAPN3-206ENST00000397163 OR4C5Q8NGB2 326 aa7.74□□□□□ -1.17
CAPN3-206ENST00000397163 OR5A2Q8NGI9 324 aa7.74□□□□□ -1.17
CAPN3-206ENST00000397163 TMEM147Q9BVK8 224 aa7.74□□□□□ -1.17
CAPN3-206ENST00000397163 WNT10AQ9GZT5 417 aa7.74□□□□□ -1.17
CAPN3-206ENST00000397163 CELSR3Q9NYQ7 3312 aa7.73□□□□□ -1.17
CAPN3-206ENST00000397163 TTC28Q96AY4 2481 aa7.73□□□□□ -1.17
CAPN3-206ENST00000397163 TRBV6-6A0A0A6YYG2 114 aa7.73□□□□□ -1.17
CAPN3-206ENST00000397163 C11orf94C9JXX5 98 aa7.73□□□□□ -1.17
CAPN3-206ENST00000397163 NGFP01138 241 aa7.73□□□□□ -1.17
CAPN3-206ENST00000397163 APOBEC3DQ96AK3 386 aaPredicted RBP7.73□□□□□ -1.17
CAPN3-206ENST00000397163 APH1AQ96BI3 265 aa7.73□□□□□ -1.17
CAPN3-206ENST00000397163 STRADBQ9C0K7 418 aa7.73□□□□□ -1.17
CAPN3-206ENST00000397163 SH2D2AQ9NP31 389 aa7.73□□□□□ -1.17
CAPN3-206ENST00000397163 CLN8Q9UBY8 286 aa7.73□□□□□ -1.17
CAPN3-206ENST00000397163 TP53TG3Q9ULZ0 132 aa7.73□□□□□ -1.17
CAPN3-206ENST00000397163 YPEL1O60688 119 aa7.73□□□□□ -1.17
CAPN3-206ENST00000397163 KRASP01116 189 aa7.73□□□□□ -1.17
CAPN3-206ENST00000397163 MPLP40238 635 aa7.73□□□□□ -1.17
CAPN3-206ENST00000397163 LINC00310P59036 64 aa7.73□□□□□ -1.17
CAPN3-206ENST00000397163 ATP6V1FQ16864 119 aa7.73□□□□□ -1.17
CAPN3-206ENST00000397163 OR10P1Q8NGE3 313 aa7.73□□□□□ -1.17
CAPN3-206ENST00000397163 YPEL2Q96QA6 119 aa7.73□□□□□ -1.17
CAPN3-206ENST00000397163 DERL1Q9BUN8 251 aa7.73□□□□□ -1.17
CAPN3-206ENST00000397163 ZDHHC11Q9H8X9 412 aa7.73□□□□□ -1.17
CAPN3-206ENST00000397163 WDR54Q9H977 334 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms