RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 LOXL3P58215 753 aa11.65□□□□□ -0.54
SEC13-208ENST00000397109 UBE2MP61081 183 aaKnown RBP11.65□□□□□ -0.54
SEC13-208ENST00000397109 FCN2Q15485 313 aa11.65□□□□□ -0.54
SEC13-208ENST00000397109 FAAP20Q6NZ36 180 aa11.65□□□□□ -0.54
SEC13-208ENST00000397109 TERB2Q8NHR7 220 aa11.65□□□□□ -0.54
SEC13-208ENST00000397109 RBM14Q96PK6 669 aaKnown RBP11.65□□□□□ -0.54
SEC13-208ENST00000397109 SLC25A33Q9BSK2 321 aa11.65□□□□□ -0.54
SEC13-208ENST00000397109 SERTAD4Q9NUC0 356 aa11.65□□□□□ -0.54
SEC13-208ENST00000397109 MBNL3Q9NUK0 354 aaKnown RBP11.65□□□□□ -0.54
SEC13-208ENST00000397109 FAM90A9PA6NNJ1 464 aa11.64□□□□□ -0.55
SEC13-208ENST00000397109 HBZP02008 142 aa11.64□□□□□ -0.55
SEC13-208ENST00000397109 GAPDHP04406 335 aaKnown RBP11.64□□□□□ -0.55
SEC13-208ENST00000397109 VSIG10L2P0DP72 767 aa11.64□□□□□ -0.55
SEC13-208ENST00000397109 RCC1P18754 421 aaPredicted RBP11.64□□□□□ -0.55
SEC13-208ENST00000397109 HRH1P35367 487 aa11.64□□□□□ -0.55
SEC13-208ENST00000397109 BLCAPP62952 87 aa11.64□□□□□ -0.55
SEC13-208ENST00000397109 SURF2Q15527 256 aaPredicted RBP11.64□□□□□ -0.55
SEC13-208ENST00000397109 C2orf68Q2NKX9 166 aa11.64□□□□□ -0.55
SEC13-208ENST00000397109 ZNF880Q6PDB4 577 aa11.64□□□□□ -0.55
SEC13-208ENST00000397109 GVQW1Q8N7I0 195 aa11.64□□□□□ -0.55
SEC13-208ENST00000397109 BEST4Q8NFU0 473 aa11.64□□□□□ -0.55
SEC13-208ENST00000397109 OR5AP2Q8NGF4 316 aa11.64□□□□□ -0.55
SEC13-208ENST00000397109 UBALD1Q8TB05 177 aa11.64□□□□□ -0.55
SEC13-208ENST00000397109 MRPL30Q8TCC3 161 aaKnown RBP11.64□□□□□ -0.55
SEC13-208ENST00000397109 ZNF486Q96H40 463 aaPredicted RBP11.64□□□□□ -0.55
SEC13-208ENST00000397109 FYTTD1Q96QD9 318 aaKnown RBP11.64□□□□□ -0.55
SEC13-208ENST00000397109 C12orf4Q9NQ89 552 aa11.64□□□□□ -0.55
SEC13-208ENST00000397109 GNG12Q9UBI6 72 aa11.64□□□□□ -0.55
SEC13-208ENST00000397109 AK3Q9UIJ7 227 aa11.64□□□□□ -0.55
SEC13-208ENST00000397109 TET2Q6N021 2002 aaPredicted RBP11.64□□□□□ -0.55
SEC13-208ENST00000397109 A0A1W2PPI3 338 aa11.63□□□□□ -0.55
SEC13-208ENST00000397109 M0QYG6 137 aa11.63□□□□□ -0.55
SEC13-208ENST00000397109 RLN1P04808 185 aa11.63□□□□□ -0.55
SEC13-208ENST00000397109 VDAC2P45880 294 aaPredicted RBP11.63□□□□□ -0.55
SEC13-208ENST00000397109 OR3A3P47888 321 aa11.63□□□□□ -0.55
SEC13-208ENST00000397109 TAS2R31P59538 309 aa11.63□□□□□ -0.55
SEC13-208ENST00000397109 ZNF816Q0VGE8 651 aaPredicted RBP11.63□□□□□ -0.55
SEC13-208ENST00000397109 HABP2Q14520 560 aaPredicted RBP11.63□□□□□ -0.55
SEC13-208ENST00000397109 PRR18Q8N4B5 295 aa11.63□□□□□ -0.55
SEC13-208ENST00000397109 OR11H7Q8NGC8 314 aa11.63□□□□□ -0.55
SEC13-208ENST00000397109 OR13C8Q8NGS7 320 aa11.63□□□□□ -0.55
SEC13-208ENST00000397109 OR5H2Q8NGV7 314 aa11.63□□□□□ -0.55
SEC13-208ENST00000397109 ZNF431Q8TF32 576 aaPredicted RBP11.63□□□□□ -0.55
SEC13-208ENST00000397109 CFHR4Q92496 578 aa11.63□□□□□ -0.55
SEC13-208ENST00000397109 TAF9BQ9HBM6 251 aa11.63□□□□□ -0.55
SEC13-208ENST00000397109 IGHV3-43A0A0B4J1X8 118 aa11.63□□□□□ -0.55
SEC13-208ENST00000397109 A0A1W2PPE3 182 aa11.63□□□□□ -0.55
SEC13-208ENST00000397109 HSD17B6O14756 317 aa11.63□□□□□ -0.55
SEC13-208ENST00000397109 GSTT2P0CG29 244 aa11.63□□□□□ -0.55
SEC13-208ENST00000397109 IGHV3-43DP0DP04 118 aa11.63□□□□□ -0.55
SEC13-208ENST00000397109 ANXA7P20073 488 aaKnown RBP11.63□□□□□ -0.55
SEC13-208ENST00000397109 Q6ZPA2 131 aa11.63□□□□□ -0.55
SEC13-208ENST00000397109 Q6ZS49 121 aa11.63□□□□□ -0.55
SEC13-208ENST00000397109 SLC25A48Q6ZT89 311 aaKnown RBP11.63□□□□□ -0.55
SEC13-208ENST00000397109 MOB1BQ7L9L4 216 aa11.63□□□□□ -0.55
SEC13-208ENST00000397109 OVCH2Q7RTZ1 564 aa11.63□□□□□ -0.55
SEC13-208ENST00000397109 SLC25A42Q86VD7 318 aa11.63□□□□□ -0.55
SEC13-208ENST00000397109 DRAM1Q8N682 238 aa11.63□□□□□ -0.55
SEC13-208ENST00000397109 OR1L1Q8NH94 360 aa11.63□□□□□ -0.55
SEC13-208ENST00000397109 CMSS1Q9BQ75 279 aaKnown RBP11.63□□□□□ -0.55
SEC13-208ENST00000397109 ZNF436Q9C0F3 470 aaPredicted RBP11.63□□□□□ -0.55
SEC13-208ENST00000397109 WNT10AQ9GZT5 417 aa11.63□□□□□ -0.55
SEC13-208ENST00000397109 OR2A4O95047 310 aa11.62□□□□□ -0.55
SEC13-208ENST00000397109 SNRNP70P08621 437 aaKnown RBP11.62□□□□□ -0.55
SEC13-208ENST00000397109 GIPP09681 153 aaPredicted RBP11.62□□□□□ -0.55
SEC13-208ENST00000397109 OR4E1P0C645 316 aa11.62□□□□□ -0.55
SEC13-208ENST00000397109 HTD2P86397 168 aa11.62□□□□□ -0.55
SEC13-208ENST00000397109 DIAPH2-AS1Q14236 149 aa11.62□□□□□ -0.55
SEC13-208ENST00000397109 HES1Q14469 280 aa11.62□□□□□ -0.55
SEC13-208ENST00000397109 SCGB2B2Q4G0G5 96 aa11.62□□□□□ -0.55
SEC13-208ENST00000397109 LPCAT3Q6P1A2 487 aa11.62□□□□□ -0.55
SEC13-208ENST00000397109 GALMQ96C23 342 aa11.62□□□□□ -0.55
SEC13-208ENST00000397109 OR2A7Q96R45 310 aa11.62□□□□□ -0.55
SEC13-208ENST00000397109 HDHD3Q9BSH5 251 aaPredicted RBP11.62□□□□□ -0.55
SEC13-208ENST00000397109 OR2S2Q9NQN1 319 aa11.62□□□□□ -0.55
SEC13-208ENST00000397109 JPT1Q9UK76 154 aa11.62□□□□□ -0.55
SEC13-208ENST00000397109 PAIP2BQ9ULR5 123 aaKnown RBP11.62□□□□□ -0.55
SEC13-208ENST00000397109 MGAT4AQ9UM21 535 aa11.62□□□□□ -0.55
SEC13-208ENST00000397109 MOB4Q9Y3A3 225 aa11.62□□□□□ -0.55
SEC13-208ENST00000397109 IGHV1-3A0A0C4DH29 117 aa11.61□□□□□ -0.55
SEC13-208ENST00000397109 TXNL1O43396 289 aa11.61□□□□□ -0.55
SEC13-208ENST00000397109 FBXO24O75426 580 aa11.61□□□□□ -0.55
SEC13-208ENST00000397109 RGS11O94810 467 aa11.61□□□□□ -0.55
SEC13-208ENST00000397109 TMEM11P17152 192 aa11.61□□□□□ -0.55
SEC13-208ENST00000397109 HLA-GP17693 338 aa11.61□□□□□ -0.55
SEC13-208ENST00000397109 ZNF137PP52743 207 aa11.61□□□□□ -0.55
SEC13-208ENST00000397109 RAP2BP61225 183 aa11.61□□□□□ -0.55
SEC13-208ENST00000397109 TSPAN5P62079 268 aa11.61□□□□□ -0.55
SEC13-208ENST00000397109 ABCA11PQ4W5N1 156 aa11.61□□□□□ -0.55
SEC13-208ENST00000397109 MORN2Q502X0 79 aa11.61□□□□□ -0.55
SEC13-208ENST00000397109 C4orf46Q504U0 113 aa11.61□□□□□ -0.55
SEC13-208ENST00000397109 Q6ZS46 218 aa11.61□□□□□ -0.55
SEC13-208ENST00000397109 MOB3BQ86TA1 216 aa11.61□□□□□ -0.55
SEC13-208ENST00000397109 LHFPL1Q86WI0 220 aa11.61□□□□□ -0.55
SEC13-208ENST00000397109 ZNF439Q8NDP4 499 aa11.61□□□□□ -0.55
SEC13-208ENST00000397109 OR10V1Q8NGI7 309 aa11.61□□□□□ -0.55
SEC13-208ENST00000397109 ST6GALNAC6Q969X2 333 aa11.61□□□□□ -0.55
SEC13-208ENST00000397109 ST6GALNAC5Q9BVH7 336 aa11.61□□□□□ -0.55
SEC13-208ENST00000397109 CHMP1AQ9HD42 196 aaPredicted RBP11.61□□□□□ -0.55
SEC13-208ENST00000397109 Q9N2K0 584 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms