RNA–Protein interactions for RNA: ENST00000396625.3

COL4A4-201, Transcript of collagen type IV alpha 4 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A4, Length 9,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4-201ENST00000396625 A0A1W2PS18 150 aa9.02□□□□□ -0.97
COL4A4-201ENST00000396625 TMEM250H0YL14 139 aa9.02□□□□□ -0.97
COL4A4-201ENST00000396625 SBF1O95248 1867 aa9.02□□□□□ -0.97
COL4A4-201ENST00000396625 NCOR1P1Q9H4R4 102 aa9.02□□□□□ -0.97
COL4A4-201ENST00000396625 KLK10O43240 276 aa9.02□□□□□ -0.97
COL4A4-201ENST00000396625 SNRPCP09234 159 aaKnown RBP9.02□□□□□ -0.97
COL4A4-201ENST00000396625 TNFRSF12AQ9NP84 129 aa9.02□□□□□ -0.97
COL4A4-201ENST00000396625 GREB1LQ9C091 1923 aaPredicted RBP9.02□□□□□ -0.97
COL4A4-201ENST00000396625 TRAV17A0A0B4J275 112 aa9.02□□□□□ -0.97
COL4A4-201ENST00000396625 RRHO14718 337 aa9.02□□□□□ -0.97
COL4A4-201ENST00000396625 GDF9O60383 454 aa9.02□□□□□ -0.97
COL4A4-201ENST00000396625 KLK8O60259 260 aa9.02□□□□□ -0.97
COL4A4-201ENST00000396625 DEGS2Q6QHC5 323 aa9.02□□□□□ -0.97
COL4A4-201ENST00000396625 EML5Q05BV3 1969 aa9.02□□□□□ -0.97
COL4A4-201ENST00000396625 PQLC2LA1A4F0 135 aa9.02□□□□□ -0.97
COL4A4-201ENST00000396625 C19orf67A6NJJ6 358 aa9.02□□□□□ -0.97
COL4A4-201ENST00000396625 SPINK2P20155 84 aa9.02□□□□□ -0.97
COL4A4-201ENST00000396625 RIPPLY2Q5TAB7 128 aa9.02□□□□□ -0.97
COL4A4-201ENST00000396625 ZBP1Q9H171 429 aa9.02□□□□□ -0.97
COL4A4-201ENST00000396625 ELOVL5Q9NYP7 299 aa9.02□□□□□ -0.97
COL4A4-201ENST00000396625 SLC25A10Q9UBX3 287 aaPredicted RBP9.02□□□□□ -0.97
COL4A4-201ENST00000396625 REG1BP48304 166 aa9.01□□□□□ -0.97
COL4A4-201ENST00000396625 DIRC2Q96SL1 478 aa9.01□□□□□ -0.97
COL4A4-201ENST00000396625 RBMY1BA6NDE4 496 aaKnown RBP9.01□□□□□ -0.97
COL4A4-201ENST00000396625 RBMY1EA6NEQ0 496 aaKnown RBP9.01□□□□□ -0.97
COL4A4-201ENST00000396625 GPX1P07203 203 aa9.01□□□□□ -0.97
COL4A4-201ENST00000396625 RBMY1DP0C7P1 496 aaKnown RBP9.01□□□□□ -0.97
COL4A4-201ENST00000396625 RBMY1A1P0DJD3 496 aaKnown RBP9.01□□□□□ -0.97
COL4A4-201ENST00000396625 RBMY1CP0DJD4 496 aa9.01□□□□□ -0.97
COL4A4-201ENST00000396625 AGAP20933 346 aa9.01□□□□□ -0.97
COL4A4-201ENST00000396625 SOCS1O15524 211 aa9.01□□□□□ -0.97
COL4A4-201ENST00000396625 STPG3Q8N7X2 389 aa9.01□□□□□ -0.97
COL4A4-201ENST00000396625 NKX2-8O15522 239 aa9.01□□□□□ -0.97
COL4A4-201ENST00000396625 TRGC1P0CF51 173 aa9.01□□□□□ -0.97
COL4A4-201ENST00000396625 FGF5P12034 268 aa9.01□□□□□ -0.97
COL4A4-201ENST00000396625 RIPPLY3P57055 190 aa9.01□□□□□ -0.97
COL4A4-201ENST00000396625 NRIP2Q9BQI9 281 aa9.01□□□□□ -0.97
COL4A4-201ENST00000396625 SLC6A13Q9NSD5 602 aa9.01□□□□□ -0.97
COL4A4-201ENST00000396625 ASB5Q8WWX0 329 aa9.01□□□□□ -0.97
COL4A4-201ENST00000396625 MRM2Q9UI43 246 aaKnown RBP9.01□□□□□ -0.97
COL4A4-201ENST00000396625 NPIPB8E9PQR5 432 aa9.01□□□□□ -0.97
COL4A4-201ENST00000396625 NPIPB9F8W1W9 429 aa9.01□□□□□ -0.97
COL4A4-201ENST00000396625 NPIPB7O75200 414 aa9.01□□□□□ -0.97
COL4A4-201ENST00000396625 APOMO95445 188 aa9.01□□□□□ -0.97
COL4A4-201ENST00000396625 FRRS1LQ9P0K9 344 aa9.01□□□□□ -0.97
COL4A4-201ENST00000396625 DPRXA6NFQ7 191 aa9.01□□□□□ -0.97
COL4A4-201ENST00000396625 ATP5IP56385 69 aaPredicted RBP9.01□□□□□ -0.97
COL4A4-201ENST00000396625 TMEM249Q2WGJ8 235 aa9.01□□□□□ -0.97
COL4A4-201ENST00000396625 PAQR9Q6ZVX9 377 aa9.01□□□□□ -0.97
COL4A4-201ENST00000396625 PTPMT1Q8WUK0 201 aaPredicted RBP9.01□□□□□ -0.97
COL4A4-201ENST00000396625 MPZL1O95297 269 aa9.01□□□□□ -0.97
COL4A4-201ENST00000396625 SRSF4Q08170 494 aaKnown RBP9.01□□□□□ -0.97
COL4A4-201ENST00000396625 ZNF793Q6ZN11 406 aa9.01□□□□□ -0.97
COL4A4-201ENST00000396625 TXNDC17Q9BRA2 123 aa9.01□□□□□ -0.97
COL4A4-201ENST00000396625 TMEM262E9PQX1 116 aa9□□□□□ -0.97
COL4A4-201ENST00000396625 HSPB1P04792 205 aaKnown RBP9□□□□□ -0.97
COL4A4-201ENST00000396625 HBBP68871 147 aa9□□□□□ -0.97
COL4A4-201ENST00000396625 KCNS1Q96KK3 526 aa9□□□□□ -0.97
COL4A4-201ENST00000396625 WNT10AQ9GZT5 417 aa9□□□□□ -0.97
COL4A4-201ENST00000396625 TNFSF18Q9UNG2 199 aa9□□□□□ -0.97
COL4A4-201ENST00000396625 LINC00869P0C866 280 aa9□□□□□ -0.97
COL4A4-201ENST00000396625 RAX2Q96IS3 184 aa9□□□□□ -0.97
COL4A4-201ENST00000396625 ZBTB34Q8NCN2 500 aa9□□□□□ -0.97
COL4A4-201ENST00000396625 PGLYRP3Q96LB9 341 aa9□□□□□ -0.97
COL4A4-201ENST00000396625 NCOA6Q14686 2063 aaPredicted RBP9□□□□□ -0.97
COL4A4-201ENST00000396625 C17orf51A8MQB3 221 aa9□□□□□ -0.97
COL4A4-201ENST00000396625 CDIPTO14735 213 aa9□□□□□ -0.97
COL4A4-201ENST00000396625 PRSS12P56730 875 aa9□□□□□ -0.97
COL4A4-201ENST00000396625 RUNX1Q01196 453 aa9□□□□□ -0.97
COL4A4-201ENST00000396625 NKG7Q16617 165 aa9□□□□□ -0.97
COL4A4-201ENST00000396625 PUSL1Q8N0Z8 303 aaKnown RBP9□□□□□ -0.97
COL4A4-201ENST00000396625 SRSF5Q13243 272 aaKnown RBP9□□□□□ -0.97
COL4A4-201ENST00000396625 IL11RAQ14626 422 aa9□□□□□ -0.97
COL4A4-201ENST00000396625 CD300LDQ6UXZ3 194 aa9□□□□□ -0.97
COL4A4-201ENST00000396625 OPN3Q9H1Y3 402 aaPredicted RBP9□□□□□ -0.97
COL4A4-201ENST00000396625 CNTFRP26992 372 aa9□□□□□ -0.97
COL4A4-201ENST00000396625 TSPOP30536 169 aa9□□□□□ -0.97
COL4A4-201ENST00000396625 C14orf144Q96I85 54 aa9□□□□□ -0.97
COL4A4-201ENST00000396625 FLRT3Q9NZU0 649 aa9□□□□□ -0.97
COL4A4-201ENST00000396625 TRBV20OR9-2A0A075B6H5 130 aa9□□□□□ -0.97
COL4A4-201ENST00000396625 TRAV8-4A0A0B4J246 113 aa9□□□□□ -0.97
COL4A4-201ENST00000396625 LURAP1LQ8IV03 231 aa9□□□□□ -0.97
COL4A4-201ENST00000396625 NYNRINQ9P2P1 1898 aaKnown RBP8.99□□□□□ -0.97
COL4A4-201ENST00000396625 NHSQ6T4R5 1651 aa8.99□□□□□ -0.97
COL4A4-201ENST00000396625 PSMG4Q5JS54 123 aa8.99□□□□□ -0.97
COL4A4-201ENST00000396625 C18orf15Q96N68 181 aa8.99□□□□□ -0.97
COL4A4-201ENST00000396625 LMO7DNF2Z398 122 aa8.99□□□□□ -0.97
COL4A4-201ENST00000396625 GABRG2P18507 467 aa8.99□□□□□ -0.97
COL4A4-201ENST00000396625 RPS11P62280 158 aaKnown RBP eCLIP8.99□□□□□ -0.97
COL4A4-201ENST00000396625 NPVFQ9HCQ7 196 aa8.99□□□□□ -0.97
COL4A4-201ENST00000396625 TINAGQ9UJW2 476 aa8.99□□□□□ -0.97
COL4A4-201ENST00000396625 ASCL4Q6XD76 172 aa8.99□□□□□ -0.97
COL4A4-201ENST00000396625 HEXA-AS1Q9H8Q6 139 aa8.99□□□□□ -0.97
COL4A4-201ENST00000396625 CISD1Q9NZ45 108 aaKnown RBP8.99□□□□□ -0.97
COL4A4-201ENST00000396625 H0Y980 276 aa8.99□□□□□ -0.97
COL4A4-201ENST00000396625 GAPDHP04406 335 aaKnown RBP8.99□□□□□ -0.97
COL4A4-201ENST00000396625 ZFAND6Q6FIF0 208 aa8.99□□□□□ -0.97
COL4A4-201ENST00000396625 LILRA5A6NI73 299 aa8.99□□□□□ -0.97
COL4A4-201ENST00000396625 SSTR5P35346 364 aa8.99□□□□□ -0.97
COL4A4-201ENST00000396625 SNRPD3P62318 126 aaKnown RBP8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms