RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 C1QL1O75973 258 aa12.38□□□□□ -0.43
CBX3-202ENST00000396386 IFNA5P01569 189 aa12.38□□□□□ -0.43
CBX3-202ENST00000396386 HBG1P69891 147 aa12.38□□□□□ -0.43
CBX3-202ENST00000396386 HBG2P69892 147 aa12.38□□□□□ -0.43
CBX3-202ENST00000396386 TMEM30BQ3MIR4 351 aa12.38□□□□□ -0.43
CBX3-202ENST00000396386 C10orf91Q5T1B1 145 aa12.38□□□□□ -0.43
CBX3-202ENST00000396386 ATRAIDQ6UW56 229 aa12.38□□□□□ -0.43
CBX3-202ENST00000396386 TGIF2LYQ8IUE0 185 aa12.38□□□□□ -0.43
CBX3-202ENST00000396386 C1orf87Q8N0U7 546 aa12.38□□□□□ -0.43
CBX3-202ENST00000396386 SVBPQ8N300 66 aa12.38□□□□□ -0.43
CBX3-202ENST00000396386 ABHD14AQ9BUJ0 271 aa12.38□□□□□ -0.43
CBX3-202ENST00000396386 NBEAQ8NFP9 2946 aa12.38□□□□□ -0.43
CBX3-202ENST00000396386 PLCE1Q9P212 2302 aa12.38□□□□□ -0.43
CBX3-202ENST00000396386 ZNF729A6NN14 1252 aaPredicted RBP12.38□□□□□ -0.43
CBX3-202ENST00000396386 SHISA9B4DS77 424 aa12.38□□□□□ -0.43
CBX3-202ENST00000396386 METTL15P1P0C7V9 234 aa12.38□□□□□ -0.43
CBX3-202ENST00000396386 FHITP49789 147 aa12.38□□□□□ -0.43
CBX3-202ENST00000396386 DVL1P1P54792 670 aaPredicted RBP12.38□□□□□ -0.43
CBX3-202ENST00000396386 NCR3LG1Q68D85 454 aa12.38□□□□□ -0.43
CBX3-202ENST00000396386 SLC25A24Q6NUK1 477 aa12.38□□□□□ -0.43
CBX3-202ENST00000396386 TCF23Q7RTU1 214 aa12.38□□□□□ -0.43
CBX3-202ENST00000396386 ST6GALNAC3Q8NDV1 305 aa12.38□□□□□ -0.43
CBX3-202ENST00000396386 R3HDM4Q96D70 268 aa12.38□□□□□ -0.43
CBX3-202ENST00000396386 SEC11CQ9BY50 192 aa12.38□□□□□ -0.43
CBX3-202ENST00000396386 NKX6-2Q9C056 277 aaPredicted RBP12.38□□□□□ -0.43
CBX3-202ENST00000396386 TRAV38-1A0A0B4J264 116 aa12.37□□□□□ -0.43
CBX3-202ENST00000396386 MARCH11A6NNE9 402 aa12.37□□□□□ -0.43
CBX3-202ENST00000396386 CD5P06127 495 aa12.37□□□□□ -0.43
CBX3-202ENST00000396386 SNCAP37840 140 aa12.37□□□□□ -0.43
CBX3-202ENST00000396386 KIR2DS2P43631 304 aa12.37□□□□□ -0.43
CBX3-202ENST00000396386 RUNX1Q01196 453 aa12.37□□□□□ -0.43
CBX3-202ENST00000396386 SPANXN5Q5MJ07 72 aa12.37□□□□□ -0.43
CBX3-202ENST00000396386 DMRTC2Q8IXT2 367 aaPredicted RBP12.37□□□□□ -0.43
CBX3-202ENST00000396386 LILRB2Q8N423 598 aa12.37□□□□□ -0.43
CBX3-202ENST00000396386 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.37□□□□□ -0.43
CBX3-202ENST00000396386 LFNGQ8NES3 379 aa12.37□□□□□ -0.43
CBX3-202ENST00000396386 DYNLRB1Q9NP97 96 aa12.37□□□□□ -0.43
CBX3-202ENST00000396386 IDI2-AS1Q9NZ38 188 aa12.37□□□□□ -0.43
CBX3-202ENST00000396386 ITPR1Q14643 2758 aa12.36□□□□□ -0.43
CBX3-202ENST00000396386 FAM90A27PA6NNH2 459 aa12.36□□□□□ -0.43
CBX3-202ENST00000396386 RBFOX2O43251 390 aaKnown RBP eCLIP12.36□□□□□ -0.43
CBX3-202ENST00000396386 FCGR3BO75015 233 aa12.36□□□□□ -0.43
CBX3-202ENST00000396386 ARHGDIBP52566 201 aa12.36□□□□□ -0.43
CBX3-202ENST00000396386 RPL39P5Q59GN2 51 aa12.36□□□□□ -0.43
CBX3-202ENST00000396386 HAPLN4Q86UW8 402 aa12.36□□□□□ -0.43
CBX3-202ENST00000396386 ZNF525Q8N782 197 aa12.36□□□□□ -0.43
CBX3-202ENST00000396386 CORO2AQ92828 525 aa12.36□□□□□ -0.43
CBX3-202ENST00000396386 GAB2Q9UQC2 676 aa12.36□□□□□ -0.43
CBX3-202ENST00000396386 PRELID3BQ9Y3B1 194 aa12.36□□□□□ -0.43
CBX3-202ENST00000396386 RP1L1Q8IWN7 2480 aaPredicted RBP12.36□□□□□ -0.43
CBX3-202ENST00000396386 E7EQL1 145 aa12.36□□□□□ -0.43
CBX3-202ENST00000396386 SLC31A2O15432 143 aa12.36□□□□□ -0.43
CBX3-202ENST00000396386 PROP1O75360 226 aa12.36□□□□□ -0.43
CBX3-202ENST00000396386 HPRT1P00492 218 aa12.36□□□□□ -0.43
CBX3-202ENST00000396386 IGHV3-7P01780 117 aa12.36□□□□□ -0.43
CBX3-202ENST00000396386 CD3EP07766 207 aa12.36□□□□□ -0.43
CBX3-202ENST00000396386 SFTA3P0C7M3 94 aa12.36□□□□□ -0.43
CBX3-202ENST00000396386 CHRNB4P30926 498 aa12.36□□□□□ -0.43
CBX3-202ENST00000396386 ZNF134P52741 427 aa12.36□□□□□ -0.43
CBX3-202ENST00000396386 LINC00205P59089 165 aa12.36□□□□□ -0.43
CBX3-202ENST00000396386 FBXL19-AS1Q494R0 122 aa12.36□□□□□ -0.43
CBX3-202ENST00000396386 AKR1C8PQ5T2L2 129 aa12.36□□□□□ -0.43
CBX3-202ENST00000396386 ZCCHC24Q8N2G6 241 aaKnown RBP12.36□□□□□ -0.43
CBX3-202ENST00000396386 SCGB1C1Q8TD33 95 aa12.36□□□□□ -0.43
CBX3-202ENST00000396386 RNASE6Q93091 150 aaKnown RBP12.36□□□□□ -0.43
CBX3-202ENST00000396386 LINC00574Q9H8X3 128 aa12.36□□□□□ -0.43
CBX3-202ENST00000396386 RFNGQ9Y644 331 aa12.36□□□□□ -0.43
CBX3-202ENST00000396386 hADV38S2A0JD32 116 aa12.35□□□□□ -0.43
CBX3-202ENST00000396386 FAM90A9PA6NNJ1 464 aa12.35□□□□□ -0.43
CBX3-202ENST00000396386 TMEM178BH3BS89 294 aa12.35□□□□□ -0.43
CBX3-202ENST00000396386 TMPRSS2O15393 492 aa12.35□□□□□ -0.43
CBX3-202ENST00000396386 RBMXL2O75526 392 aaKnown RBP12.35□□□□□ -0.43
CBX3-202ENST00000396386 NDUFB7P17568 137 aa12.35□□□□□ -0.43
CBX3-202ENST00000396386 ERVK-16P61578 105 aa12.35□□□□□ -0.43
CBX3-202ENST00000396386 ARL16Q0P5N6 197 aa12.35□□□□□ -0.43
CBX3-202ENST00000396386 GUCA2BQ16661 112 aa12.35□□□□□ -0.43
CBX3-202ENST00000396386 TMEM14EPQ6UXP3 125 aa12.35□□□□□ -0.43
CBX3-202ENST00000396386 DPPA3Q6W0C5 159 aa12.35□□□□□ -0.43
CBX3-202ENST00000396386 DTD1Q8TEA8 209 aa12.35□□□□□ -0.43
CBX3-202ENST00000396386 LEAP2Q969E1 77 aa12.35□□□□□ -0.43
CBX3-202ENST00000396386 CIB3Q96Q77 187 aaPredicted RBP12.35□□□□□ -0.43
CBX3-202ENST00000396386 LINC00312Q9Y6C7 94 aa12.35□□□□□ -0.43
CBX3-202ENST00000396386 PPIAL4EA0A075B759 164 aa12.34□□□□□ -0.43
CBX3-202ENST00000396386 PPIAL4DF5H284 164 aa12.34□□□□□ -0.43
CBX3-202ENST00000396386 CCL21O00585 134 aa12.34□□□□□ -0.43
CBX3-202ENST00000396386 PPIAL4FP0DN26 164 aa12.34□□□□□ -0.43
CBX3-202ENST00000396386 NFYBP25208 207 aa12.34□□□□□ -0.43
CBX3-202ENST00000396386 SLC38A11Q08AI6 406 aa12.34□□□□□ -0.43
CBX3-202ENST00000396386 PEA15Q15121 130 aa12.34□□□□□ -0.43
CBX3-202ENST00000396386 GUK1Q16774 197 aa12.34□□□□□ -0.43
CBX3-202ENST00000396386 CT45A1Q5HYN5 189 aa12.34□□□□□ -0.43
CBX3-202ENST00000396386 PUSL1Q8N0Z8 303 aaKnown RBP12.34□□□□□ -0.43
CBX3-202ENST00000396386 ZNF439Q8NDP4 499 aa12.34□□□□□ -0.43
CBX3-202ENST00000396386 CT45A3Q8NHU0 189 aa12.34□□□□□ -0.43
CBX3-202ENST00000396386 NEUROG1Q92886 237 aa12.34□□□□□ -0.43
CBX3-202ENST00000396386 S1PR3Q99500 378 aa12.34□□□□□ -0.43
CBX3-202ENST00000396386 PBDC1Q9BVG4 233 aa12.34□□□□□ -0.43
CBX3-202ENST00000396386 PARD6GQ9BYG4 376 aaPredicted RBP12.34□□□□□ -0.43
CBX3-202ENST00000396386 TMEM106BQ9NUM4 274 aa12.34□□□□□ -0.43
CBX3-202ENST00000396386 SLC25A10Q9UBX3 287 aaPredicted RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms