RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 SRD5A3Q9H8P0 318 aa11.94□□□□□ -0.5
SNCA-205ENST00000394991 TRBV5-7A0A0A0MS05 114 aa11.93□□□□□ -0.5
SNCA-205ENST00000394991 RGS10O43665 173 aa11.93□□□□□ -0.5
SNCA-205ENST00000394991 PROP1O75360 226 aa11.93□□□□□ -0.5
SNCA-205ENST00000394991 SPDEFO95238 335 aa11.93□□□□□ -0.5
SNCA-205ENST00000394991 IGKV1-16P04430 117 aa11.93□□□□□ -0.5
SNCA-205ENST00000394991 CD1AP06126 327 aa11.93□□□□□ -0.5
SNCA-205ENST00000394991 LINC00205P59089 165 aa11.93□□□□□ -0.5
SNCA-205ENST00000394991 RPEL1Q2QD12 228 aa11.93□□□□□ -0.5
SNCA-205ENST00000394991 CD300EQ496F6 205 aaPredicted RBP11.93□□□□□ -0.5
SNCA-205ENST00000394991 DRAXINQ8NBI3 349 aaPredicted RBP11.93□□□□□ -0.5
SNCA-205ENST00000394991 BVESQ8NE79 360 aa11.93□□□□□ -0.5
SNCA-205ENST00000394991 OR2K2Q8NGT1 345 aa11.93□□□□□ -0.5
SNCA-205ENST00000394991 DERL3Q96Q80 235 aa11.93□□□□□ -0.5
SNCA-205ENST00000394991 SULT4A1Q9BR01 284 aa11.93□□□□□ -0.5
SNCA-205ENST00000394991 AGMATQ9BSE5 352 aa11.93□□□□□ -0.5
SNCA-205ENST00000394991 ST6GALNAC5Q9BVH7 336 aa11.93□□□□□ -0.5
SNCA-205ENST00000394991 TINAGL1Q9GZM7 467 aaPredicted RBP11.93□□□□□ -0.5
SNCA-205ENST00000394991 STEAP1Q9UHE8 339 aa11.93□□□□□ -0.5
SNCA-205ENST00000394991 OR2A4O95047 310 aa11.92□□□□□ -0.5
SNCA-205ENST00000394991 CNIH1O95406 144 aa11.92□□□□□ -0.5
SNCA-205ENST00000394991 HSMCR30P0CW71 290 aa11.92□□□□□ -0.5
SNCA-205ENST00000394991 MAPK3P27361 379 aaPredicted RBP11.92□□□□□ -0.5
SNCA-205ENST00000394991 PJVKQ0ZLH3 352 aa11.92□□□□□ -0.5
SNCA-205ENST00000394991 PMS2P11Q13670 270 aa11.92□□□□□ -0.5
SNCA-205ENST00000394991 IRF3Q14653 427 aa11.92□□□□□ -0.5
SNCA-205ENST00000394991 LAX1Q8IWV1 398 aa11.92□□□□□ -0.5
SNCA-205ENST00000394991 SVOPQ8N4V2 548 aa11.92□□□□□ -0.5
SNCA-205ENST00000394991 RPP25LQ8N5L8 163 aaKnown RBP11.92□□□□□ -0.5
SNCA-205ENST00000394991 FAM46BQ96A09 425 aa11.92□□□□□ -0.5
SNCA-205ENST00000394991 TSNAXQ99598 290 aaKnown RBP11.92□□□□□ -0.5
SNCA-205ENST00000394991 DUSP21Q9H596 190 aa11.92□□□□□ -0.5
SNCA-205ENST00000394991 LSM2Q9Y333 95 aaKnown RBP11.92□□□□□ -0.5
SNCA-205ENST00000394991 BOLA1Q9Y3E2 137 aa11.92□□□□□ -0.5
SNCA-205ENST00000394991 LRRC42Q9Y546 428 aa11.92□□□□□ -0.5
SNCA-205ENST00000394991 OR11H12B2RN74 326 aa11.91□□□□□ -0.5
SNCA-205ENST00000394991 CPEP16870 476 aa11.91□□□□□ -0.5
SNCA-205ENST00000394991 AADACP22760 399 aa11.91□□□□□ -0.5
SNCA-205ENST00000394991 CRHBPP24387 322 aa11.91□□□□□ -0.5
SNCA-205ENST00000394991 RPS16P62249 146 aaKnown RBP11.91□□□□□ -0.5
SNCA-205ENST00000394991 INSL4Q14641 139 aa11.91□□□□□ -0.5
SNCA-205ENST00000394991 TATDN3Q17R31 274 aa11.91□□□□□ -0.5
SNCA-205ENST00000394991 ACSM3Q53FZ2 586 aa11.91□□□□□ -0.5
SNCA-205ENST00000394991 MS4A15Q8N5U1 240 aa11.91□□□□□ -0.5
SNCA-205ENST00000394991 ZNF383Q8NA42 475 aa11.91□□□□□ -0.5
SNCA-205ENST00000394991 THRSPQ92748 146 aa11.91□□□□□ -0.5
SNCA-205ENST00000394991 UFD1Q92890 307 aa11.91□□□□□ -0.5
SNCA-205ENST00000394991 SLC2A8Q9NY64 477 aa11.91□□□□□ -0.5
SNCA-205ENST00000394991 ABRACLQ9P1F3 81 aa11.91□□□□□ -0.5
SNCA-205ENST00000394991 RAB26Q9ULW5 256 aa11.91□□□□□ -0.5
SNCA-205ENST00000394991 BMPR1BO00238 502 aa11.9□□□□□ -0.5
SNCA-205ENST00000394991 IGLV2-23P01705 113 aa11.9□□□□□ -0.5
SNCA-205ENST00000394991 EDN2P20800 178 aa11.9□□□□□ -0.5
SNCA-205ENST00000394991 MAP2K4P45985 399 aa11.9□□□□□ -0.5
SNCA-205ENST00000394991 EWSR1Q01844 656 aaKnown RBP eCLIP11.9□□□□□ -0.5
SNCA-205ENST00000394991 RBM48Q5RL73 367 aaKnown RBP11.9□□□□□ -0.5
SNCA-205ENST00000394991 LIPKQ5VXJ0 399 aa11.9□□□□□ -0.5
SNCA-205ENST00000394991 ZNF880Q6PDB4 577 aa11.9□□□□□ -0.5
SNCA-205ENST00000394991 OVOL2Q9BRP0 275 aa11.9□□□□□ -0.5
SNCA-205ENST00000394991 FAAP24Q9BTP7 215 aa11.9□□□□□ -0.5
SNCA-205ENST00000394991 C11orf54Q9H0W9 315 aaPredicted RBP11.9□□□□□ -0.5
SNCA-205ENST00000394991 OR1A1Q9P1Q5 309 aa11.9□□□□□ -0.5
SNCA-205ENST00000394991 PEMTQ9UBM1 199 aa11.9□□□□□ -0.5
SNCA-205ENST00000394991 PCLOQ9Y6V0 5065 aa11.9□□□□□ -0.5
SNCA-205ENST00000394991 CXorf65A6NEN9 183 aa11.89□□□□□ -0.51
SNCA-205ENST00000394991 ITGB1BP1O14713 200 aa11.89□□□□□ -0.51
SNCA-205ENST00000394991 NAPSAO96009 420 aa11.89□□□□□ -0.51
SNCA-205ENST00000394991 CRYGBP07316 175 aa11.89□□□□□ -0.51
SNCA-205ENST00000394991 PRSS48Q7RTY5 328 aa11.89□□□□□ -0.51
SNCA-205ENST00000394991 C6orf201Q7Z4U5 140 aa11.89□□□□□ -0.51
SNCA-205ENST00000394991 CEACAM19Q7Z692 300 aa11.89□□□□□ -0.51
SNCA-205ENST00000394991 PDPNQ86YL7 162 aa11.89□□□□□ -0.51
SNCA-205ENST00000394991 CDH26Q8IXH8 852 aa11.89□□□□□ -0.51
SNCA-205ENST00000394991 TMEM203Q969S6 136 aa11.89□□□□□ -0.51
SNCA-205ENST00000394991 COA4Q9NYJ1 87 aa11.89□□□□□ -0.51
SNCA-205ENST00000394991 BLOC1S6Q9UL45 172 aa11.89□□□□□ -0.51
SNCA-205ENST00000394991 HECTD4Q9Y4D8 3996 aa11.89□□□□□ -0.51
SNCA-205ENST00000394991 AIREO43918 545 aa11.88□□□□□ -0.51
SNCA-205ENST00000394991 APELAP0DMC3 54 aa11.88□□□□□ -0.51
SNCA-205ENST00000394991 MRGPRG-AS1Q2M3A8 158 aa11.88□□□□□ -0.51
SNCA-205ENST00000394991 DEFB114Q30KQ6 69 aa11.88□□□□□ -0.51
SNCA-205ENST00000394991 NKAIN3Q8N8D7 197 aa11.88□□□□□ -0.51
SNCA-205ENST00000394991 SNAPC3Q92966 411 aa11.88□□□□□ -0.51
SNCA-205ENST00000394991 USMG5Q96IX5 58 aa11.88□□□□□ -0.51
SNCA-205ENST00000394991 NEDD4LQ96PU5 975 aa11.88□□□□□ -0.51
SNCA-205ENST00000394991 ZC4H2Q9NQZ6 224 aa11.88□□□□□ -0.51
SNCA-205ENST00000394991 KIAA1109Q2LD37 5005 aa11.87□□□□□ -0.51
SNCA-205ENST00000394991 NUPR2A6NF83 97 aa11.87□□□□□ -0.51
SNCA-205ENST00000394991 DEDDO75618 318 aa11.87□□□□□ -0.51
SNCA-205ENST00000394991 LGALS7P47929 136 aa11.87□□□□□ -0.51
SNCA-205ENST00000394991 RPS25P62851 125 aaKnown RBP11.87□□□□□ -0.51
SNCA-205ENST00000394991 GUCA2BQ16661 112 aa11.87□□□□□ -0.51
SNCA-205ENST00000394991 HSD17B12Q53GQ0 312 aa11.87□□□□□ -0.51
SNCA-205ENST00000394991 OR10K2Q6IF99 312 aa11.87□□□□□ -0.51
SNCA-205ENST00000394991 ADAD2Q8NCV1 583 aaKnown RBP11.87□□□□□ -0.51
SNCA-205ENST00000394991 SETD6Q8TBK2 473 aa11.87□□□□□ -0.51
SNCA-205ENST00000394991 DYNLRB2Q8TF09 96 aa11.87□□□□□ -0.51
SNCA-205ENST00000394991 WDR89Q96FK6 387 aaPredicted RBP11.87□□□□□ -0.51
SNCA-205ENST00000394991 TMEM68Q96MH6 324 aa11.87□□□□□ -0.51
SNCA-205ENST00000394991 Q9H521 79 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms