RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 SHISA2Q6UWI4 295 aa15.78■□□□□ 0.12
SNCA-203ENST00000394986 C11orf44Q8N8P7 122 aa15.78■□□□□ 0.12
SNCA-203ENST00000394986 OR8H1Q8NGG4 311 aa15.78■□□□□ 0.12
SNCA-203ENST00000394986 GPHA2Q96T91 129 aa15.78■□□□□ 0.12
SNCA-203ENST00000394986 CCL28Q9NRJ3 127 aa15.78■□□□□ 0.12
SNCA-203ENST00000394986 SLC35D1Q9NTN3 355 aa15.78■□□□□ 0.12
SNCA-203ENST00000394986 DUTP33316 252 aaKnown RBP15.77■□□□□ 0.12
SNCA-203ENST00000394986 TMEM17Q86X19 198 aa15.77■□□□□ 0.12
SNCA-203ENST00000394986 GIMAP1Q8WWP7 306 aa15.77■□□□□ 0.12
SNCA-203ENST00000394986 RASL11BQ9BPW5 248 aa15.77■□□□□ 0.12
SNCA-203ENST00000394986 ZNF2Q9BSG1 426 aaPredicted RBP15.77■□□□□ 0.12
SNCA-203ENST00000394986 LIN7CQ9NUP9 197 aaKnown RBP15.77■□□□□ 0.12
SNCA-203ENST00000394986 RBMX2Q9Y388 322 aaKnown RBP15.77■□□□□ 0.12
SNCA-203ENST00000394986 LINC01548A6NM66 108 aa15.77■□□□□ 0.11
SNCA-203ENST00000394986 M0QYG6 137 aa15.77■□□□□ 0.11
SNCA-203ENST00000394986 NBR2O15453 112 aa15.77■□□□□ 0.11
SNCA-203ENST00000394986 TPPPO94811 219 aa15.77■□□□□ 0.11
SNCA-203ENST00000394986 THBS3P49746 956 aa15.77■□□□□ 0.11
SNCA-203ENST00000394986 RPL30P62888 115 aaKnown RBP15.77■□□□□ 0.11
SNCA-203ENST00000394986 ZNF660Q6AZW8 331 aaPredicted RBP15.77■□□□□ 0.11
SNCA-203ENST00000394986 PYHIN1Q6K0P9 492 aa15.77■□□□□ 0.11
SNCA-203ENST00000394986 BVESQ8NE79 360 aa15.77■□□□□ 0.11
SNCA-203ENST00000394986 FCAMRQ8WWV6 532 aa15.77■□□□□ 0.11
SNCA-203ENST00000394986 DGCR14Q96DF8 476 aaKnown RBP15.77■□□□□ 0.11
SNCA-203ENST00000394986 CITED1Q99966 193 aa15.77■□□□□ 0.11
SNCA-203ENST00000394986 HSPB9Q9BQS6 159 aa15.77■□□□□ 0.11
SNCA-203ENST00000394986 WNT10AQ9GZT5 417 aa15.77■□□□□ 0.11
SNCA-203ENST00000394986 SLC5A7Q9GZV3 580 aa15.77■□□□□ 0.11
SNCA-203ENST00000394986 MTFP1Q9UDX5 166 aa15.77■□□□□ 0.11
SNCA-203ENST00000394986 LINC00527Q9UJ94 153 aa15.77■□□□□ 0.11
SNCA-203ENST00000394986 TNFSF12O43508 249 aa15.76■□□□□ 0.11
SNCA-203ENST00000394986 RBBP9O75884 186 aa15.76■□□□□ 0.11
SNCA-203ENST00000394986 HERV-K104P61576 105 aa15.76■□□□□ 0.11
SNCA-203ENST00000394986 OR2B11Q5JQS5 317 aa15.76■□□□□ 0.11
SNCA-203ENST00000394986 PDPNQ86YL7 162 aa15.76■□□□□ 0.11
SNCA-203ENST00000394986 NPBQ8NG41 125 aa15.76■□□□□ 0.11
SNCA-203ENST00000394986 C15orf40Q8WUR7 153 aa15.76■□□□□ 0.11
SNCA-203ENST00000394986 DDB2Q92466 427 aa15.76■□□□□ 0.11
SNCA-203ENST00000394986 NOL4LQ96MY1 436 aaPredicted RBP15.76■□□□□ 0.11
SNCA-203ENST00000394986 FXYD6Q9H0Q3 95 aa15.76■□□□□ 0.11
SNCA-203ENST00000394986 MMP27Q9H306 513 aa15.76■□□□□ 0.11
SNCA-203ENST00000394986 TAS2R8Q9NYW2 309 aa15.76■□□□□ 0.11
SNCA-203ENST00000394986 NDUFA13Q9P0J0 144 aa15.76■□□□□ 0.11
SNCA-203ENST00000394986 GABARAPH6UMI1 98 aa15.75■□□□□ 0.11
SNCA-203ENST00000394986 NDUFA3O95167 84 aa15.75■□□□□ 0.11
SNCA-203ENST00000394986 CD3DP04234 171 aa15.75■□□□□ 0.11
SNCA-203ENST00000394986 RPS16P62249 146 aaKnown RBP15.75■□□□□ 0.11
SNCA-203ENST00000394986 EIF4EBP1Q13541 118 aaPredicted RBP15.75■□□□□ 0.11
SNCA-203ENST00000394986 C5orf64Q2M2E5 130 aa15.75■□□□□ 0.11
SNCA-203ENST00000394986 C10orf99Q6UWK7 81 aa15.75■□□□□ 0.11
SNCA-203ENST00000394986 DHRS11Q6UWP2 260 aa15.75■□□□□ 0.11
SNCA-203ENST00000394986 SLC35E3Q7Z769 313 aa15.75■□□□□ 0.11
SNCA-203ENST00000394986 SMIM4Q8WVI0 70 aa15.75■□□□□ 0.11
SNCA-203ENST00000394986 TINAGL1Q9GZM7 467 aaPredicted RBP15.75■□□□□ 0.11
SNCA-203ENST00000394986 FBXL15Q9H469 300 aa15.75■□□□□ 0.11
SNCA-203ENST00000394986 KIAA1456Q9P272 454 aa15.75■□□□□ 0.11
SNCA-203ENST00000394986 FABP12A6NFH5 140 aa15.74■□□□□ 0.11
SNCA-203ENST00000394986 SLC22A5O76082 557 aa15.74■□□□□ 0.11
SNCA-203ENST00000394986 IGHG2P01859 326 aa15.74■□□□□ 0.11
SNCA-203ENST00000394986 PSG5Q15238 335 aa15.74■□□□□ 0.11
SNCA-203ENST00000394986 ZNF818PQ6ZRF7 136 aa15.74■□□□□ 0.11
SNCA-203ENST00000394986 KCTD9Q7L273 389 aa15.74■□□□□ 0.11
SNCA-203ENST00000394986 WIPF2Q8TF74 440 aaPredicted RBP15.74■□□□□ 0.11
SNCA-203ENST00000394986 MOB3AQ96BX8 217 aa15.74■□□□□ 0.11
SNCA-203ENST00000394986 FLYWCH2Q96CP2 140 aaKnown RBP15.74■□□□□ 0.11
SNCA-203ENST00000394986 ADTRPQ96IZ2 230 aa15.74■□□□□ 0.11
SNCA-203ENST00000394986 SOSTQ9BQB4 213 aa15.74■□□□□ 0.11
SNCA-203ENST00000394986 ZNF107Q9UII5 783 aaPredicted RBP15.74■□□□□ 0.11
SNCA-203ENST00000394986 A3GALT2U3KPV4 340 aa15.74■□□□□ 0.11
SNCA-203ENST00000394986 RRHO14718 337 aa15.73■□□□□ 0.11
SNCA-203ENST00000394986 CD28P10747 220 aa15.73■□□□□ 0.11
SNCA-203ENST00000394986 TSPAN5P62079 268 aa15.73■□□□□ 0.11
SNCA-203ENST00000394986 MRPS10P82664 201 aaKnown RBP15.73■□□□□ 0.11
SNCA-203ENST00000394986 RTL8BQ17RB0 113 aa15.73■□□□□ 0.11
SNCA-203ENST00000394986 OR4D10Q8NGI6 311 aa15.73■□□□□ 0.11
SNCA-203ENST00000394986 OR6F1Q8NGZ6 308 aa15.73■□□□□ 0.11
SNCA-203ENST00000394986 TCTEX1D2Q8WW35 142 aa15.73■□□□□ 0.11
SNCA-203ENST00000394986 TPSG1Q9NRR2 321 aa15.73■□□□□ 0.11
SNCA-203ENST00000394986 CTDSPLO15194 276 aa15.72■□□□□ 0.11
SNCA-203ENST00000394986 FCGR3BO75015 233 aa15.72■□□□□ 0.11
SNCA-203ENST00000394986 CRYZL1O95825 349 aa15.72■□□□□ 0.11
SNCA-203ENST00000394986 S100A5P33763 92 aa15.72■□□□□ 0.11
SNCA-203ENST00000394986 PLGLAQ15195 96 aa15.72■□□□□ 0.11
SNCA-203ENST00000394986 ACTBL2Q562R1 376 aa15.72■□□□□ 0.11
SNCA-203ENST00000394986 CENPVQ7Z7K6 275 aaPredicted RBP15.72■□□□□ 0.11
SNCA-203ENST00000394986 HARBI1Q96MB7 349 aa15.72■□□□□ 0.11
SNCA-203ENST00000394986 CLCC1Q96S66 551 aa15.72■□□□□ 0.11
SNCA-203ENST00000394986 METTL1Q9UBP6 276 aaKnown RBP15.72■□□□□ 0.11
SNCA-203ENST00000394986 V9GYH0 126 aa15.72■□□□□ 0.11
SNCA-203ENST00000394986 FCN1O00602 326 aa15.71■□□□□ 0.11
SNCA-203ENST00000394986 SLC25A17O43808 307 aa15.71■□□□□ 0.11
SNCA-203ENST00000394986 IGLV2-23P01705 113 aa15.71■□□□□ 0.11
SNCA-203ENST00000394986 GNRHRP30968 328 aa15.71■□□□□ 0.11
SNCA-203ENST00000394986 RNASE10Q5GAN6 216 aaKnown RBP15.71■□□□□ 0.11
SNCA-203ENST00000394986 VAX1Q5SQQ9 334 aa15.71■□□□□ 0.11
SNCA-203ENST00000394986 FAAP20Q6NZ36 180 aa15.71■□□□□ 0.11
SNCA-203ENST00000394986 MFSD4AQ8N468 514 aa15.71■□□□□ 0.11
SNCA-203ENST00000394986 TMEM229BQ8NBD8 167 aa15.71■□□□□ 0.11
SNCA-203ENST00000394986 TSNAXQ99598 290 aaKnown RBP15.71■□□□□ 0.11
SNCA-203ENST00000394986 RNF5Q99942 180 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms