RNA–Protein interactions for RNA: ENST00000394768.6

SYNE2-205, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 11,095 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-205ENST00000394768 SYNGR3O43761 229 aa6.47□□□□□ -1.37
SYNE2-205ENST00000394768 PPIAL4GP0DN37 164 aa6.47□□□□□ -1.37
SYNE2-205ENST00000394768 COX5BP10606 129 aa6.47□□□□□ -1.37
SYNE2-205ENST00000394768 MMP16P51512 607 aa6.47□□□□□ -1.37
SYNE2-205ENST00000394768 C10orf111Q8N326 155 aa6.47□□□□□ -1.37
SYNE2-205ENST00000394768 SMRP1Q8NCR6 262 aa6.47□□□□□ -1.37
SYNE2-205ENST00000394768 MPV17P39210 176 aa6.47□□□□□ -1.37
SYNE2-205ENST00000394768 COL9A3Q14050 684 aaPredicted RBP6.47□□□□□ -1.37
SYNE2-205ENST00000394768 HIKESHIQ53FT3 197 aa6.47□□□□□ -1.37
SYNE2-205ENST00000394768 SAXO1Q8IYX7 474 aa6.47□□□□□ -1.37
SYNE2-205ENST00000394768 COX14Q96I36 57 aa6.47□□□□□ -1.37
SYNE2-205ENST00000394768 A0A1B0GTH9 108 aa6.46□□□□□ -1.37
SYNE2-205ENST00000394768 CLDN14O95500 239 aa6.46□□□□□ -1.37
SYNE2-205ENST00000394768 FAM71F2Q6NXP2 309 aa6.46□□□□□ -1.37
SYNE2-205ENST00000394768 C1orf162Q8NEQ5 155 aaPredicted RBP6.46□□□□□ -1.37
SYNE2-205ENST00000394768 SDF2L1Q9HCN8 221 aa6.46□□□□□ -1.37
SYNE2-205ENST00000394768 NHSL1Q5SYE7 1610 aa6.46□□□□□ -1.37
SYNE2-205ENST00000394768 CACNA1BQ00975 2339 aa6.46□□□□□ -1.37
SYNE2-205ENST00000394768 FTH1P19P0C7X4 201 aa6.46□□□□□ -1.37
SYNE2-205ENST00000394768 RTN4RL2Q86UN3 420 aa6.46□□□□□ -1.37
SYNE2-205ENST00000394768 FAM24BQ8N5W8 94 aa6.46□□□□□ -1.37
SYNE2-205ENST00000394768 WNT5BQ9H1J7 359 aa6.46□□□□□ -1.37
SYNE2-205ENST00000394768 SLC6A13Q9NSD5 602 aa6.46□□□□□ -1.37
SYNE2-205ENST00000394768 A0A1W2PRD5 423 aa6.46□□□□□ -1.37
SYNE2-205ENST00000394768 A0A1W2PRF3 423 aa6.46□□□□□ -1.37
SYNE2-205ENST00000394768 A0A1W2PRM7 423 aa6.46□□□□□ -1.37
SYNE2-205ENST00000394768 HLA-DRB1P01911 266 aa6.46□□□□□ -1.37
SYNE2-205ENST00000394768 TMEM50BP56557 158 aa6.46□□□□□ -1.37
SYNE2-205ENST00000394768 ADAMTS17Q8TE56 1095 aa6.46□□□□□ -1.37
SYNE2-205ENST00000394768 NXT2Q9NPJ8 142 aaKnown RBP6.46□□□□□ -1.37
SYNE2-205ENST00000394768 TRPM3Q9HCF6 1732 aaPredicted RBP6.46□□□□□ -1.38
SYNE2-205ENST00000394768 LOC389332A0A1B0GUA5 103 aa6.46□□□□□ -1.38
SYNE2-205ENST00000394768 GFRA3O60609 400 aa6.46□□□□□ -1.38
SYNE2-205ENST00000394768 MARVELD1Q9BSK0 173 aa6.46□□□□□ -1.38
SYNE2-205ENST00000394768 CXorf65A6NEN9 183 aa6.46□□□□□ -1.38
SYNE2-205ENST00000394768 LINC00587B1AMM8 73 aa6.46□□□□□ -1.38
SYNE2-205ENST00000394768 SELENOPP49908 381 aa6.46□□□□□ -1.38
SYNE2-205ENST00000394768 TCL1AP56279 114 aa6.46□□□□□ -1.38
SYNE2-205ENST00000394768 PKIBQ9C010 78 aa6.46□□□□□ -1.38
SYNE2-205ENST00000394768 WBP1LQ9NX94 342 aa6.46□□□□□ -1.38
SYNE2-205ENST00000394768 PXMP4Q9Y6I8 212 aa6.46□□□□□ -1.38
SYNE2-205ENST00000394768 TM4SF5O14894 197 aa6.46□□□□□ -1.38
SYNE2-205ENST00000394768 CA7P43166 264 aa6.46□□□□□ -1.38
SYNE2-205ENST00000394768 ATG4DQ86TL0 474 aaPredicted RBP6.46□□□□□ -1.38
SYNE2-205ENST00000394768 OR51G1Q8NGK1 321 aa6.46□□□□□ -1.38
SYNE2-205ENST00000394768 DNAJC4Q9NNZ3 241 aa6.46□□□□□ -1.38
SYNE2-205ENST00000394768 ATXN7O15265 892 aaPredicted RBP6.46□□□□□ -1.38
SYNE2-205ENST00000394768 FGF12P61328 243 aa6.46□□□□□ -1.38
SYNE2-205ENST00000394768 AWAT1Q58HT5 328 aa6.46□□□□□ -1.38
SYNE2-205ENST00000394768 TCRBV16S1A1N1A0A5B0 115 aa6.46□□□□□ -1.38
SYNE2-205ENST00000394768 FOLR2P14207 255 aa6.46□□□□□ -1.38
SYNE2-205ENST00000394768 MRPL24Q96A35 216 aaKnown RBP6.46□□□□□ -1.38
SYNE2-205ENST00000394768 KCNK17Q96T54 332 aa6.46□□□□□ -1.38
SYNE2-205ENST00000394768 ZNF646O15015 1829 aaPredicted RBP6.46□□□□□ -1.38
SYNE2-205ENST00000394768 ARFGEF1Q9Y6D6 1849 aa6.46□□□□□ -1.38
SYNE2-205ENST00000394768 TRAV20A0A0B4J274 112 aa6.46□□□□□ -1.38
SYNE2-205ENST00000394768 ZNF729A6NN14 1252 aaPredicted RBP6.46□□□□□ -1.38
SYNE2-205ENST00000394768 ATP5LO75964 103 aa6.46□□□□□ -1.38
SYNE2-205ENST00000394768 CLEC18BQ6UXF7 455 aa6.46□□□□□ -1.38
SYNE2-205ENST00000394768 LINC00469Q8N7U9 141 aa6.46□□□□□ -1.38
SYNE2-205ENST00000394768 MBD3L1Q8WWY6 194 aa6.46□□□□□ -1.38
SYNE2-205ENST00000394768 PRSS27Q9BQR3 290 aa6.46□□□□□ -1.38
SYNE2-205ENST00000394768 RNF224P0DH78 156 aa6.45□□□□□ -1.38
SYNE2-205ENST00000394768 SFRP2Q96HF1 295 aa6.45□□□□□ -1.38
SYNE2-205ENST00000394768 AKIP1Q9NQ31 210 aa6.45□□□□□ -1.38
SYNE2-205ENST00000394768 NOTCH3Q9UM47 2321 aa6.45□□□□□ -1.38
SYNE2-205ENST00000394768 TCRBV5S1A1TA0A578 114 aa6.45□□□□□ -1.38
SYNE2-205ENST00000394768 OR11H12B2RN74 326 aa6.45□□□□□ -1.38
SYNE2-205ENST00000394768 HIST1H1AQ02539 215 aaPredicted RBP6.45□□□□□ -1.38
SYNE2-205ENST00000394768 OR11H1Q8NG94 326 aa6.45□□□□□ -1.38
SYNE2-205ENST00000394768 OR11H2Q8NH07 326 aa6.45□□□□□ -1.38
SYNE2-205ENST00000394768 DNASE2BQ8WZ79 361 aa6.45□□□□□ -1.38
SYNE2-205ENST00000394768 AICDAQ9GZX7 198 aa6.45□□□□□ -1.38
SYNE2-205ENST00000394768 C5orf67F2Z3F1 127 aa6.45□□□□□ -1.38
SYNE2-205ENST00000394768 CD1AP06126 327 aa6.45□□□□□ -1.38
SYNE2-205ENST00000394768 TFPI2P48307 235 aa6.45□□□□□ -1.38
SYNE2-205ENST00000394768 TMEM86BQ8N661 226 aa6.45□□□□□ -1.38
SYNE2-205ENST00000394768 RBKSQ9H477 322 aa6.45□□□□□ -1.38
SYNE2-205ENST00000394768 UQCR10Q9UDW1 63 aa6.45□□□□□ -1.38
SYNE2-205ENST00000394768 FUT9Q9Y231 359 aa6.45□□□□□ -1.38
SYNE2-205ENST00000394768 TRAV39A0A0B4J263 110 aa6.45□□□□□ -1.38
SYNE2-205ENST00000394768 ITGBL1O95965 494 aaPredicted RBP6.45□□□□□ -1.38
SYNE2-205ENST00000394768 CCL8P80075 99 aa6.45□□□□□ -1.38
SYNE2-205ENST00000394768 MEF2BQ02080 365 aaPredicted RBP6.45□□□□□ -1.38
SYNE2-205ENST00000394768 FAM168AQ92567 244 aa6.45□□□□□ -1.38
SYNE2-205ENST00000394768 ST6GALNAC2Q9UJ37 374 aa6.45□□□□□ -1.38
SYNE2-205ENST00000394768 H3BMH7 237 aa6.45□□□□□ -1.38
SYNE2-205ENST00000394768 OR8G5Q8NG78 346 aa6.45□□□□□ -1.38
SYNE2-205ENST00000394768 SOX21Q9Y651 276 aaPredicted RBP6.45□□□□□ -1.38
SYNE2-205ENST00000394768 DOCK3Q8IZD9 2030 aa6.45□□□□□ -1.38
SYNE2-205ENST00000394768 EWSR1Q01844 656 aaKnown RBP eCLIP6.45□□□□□ -1.38
SYNE2-205ENST00000394768 SHISA8B8ZZ34 492 aa6.45□□□□□ -1.38
SYNE2-205ENST00000394768 IFI6P09912 130 aa6.45□□□□□ -1.38
SYNE2-205ENST00000394768 TMEM177Q53S58 311 aa6.45□□□□□ -1.38
SYNE2-205ENST00000394768 C9orf50Q5SZB4 431 aa6.45□□□□□ -1.38
SYNE2-205ENST00000394768 UBE2DNLQ8IWF7 75 aa6.45□□□□□ -1.38
SYNE2-205ENST00000394768 NKX2-8O15522 239 aa6.45□□□□□ -1.38
SYNE2-205ENST00000394768 PAGE4O60829 102 aa6.45□□□□□ -1.38
SYNE2-205ENST00000394768 RIPPLY2Q5TAB7 128 aa6.45□□□□□ -1.38
SYNE2-205ENST00000394768 MZB1Q8WU39 189 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms