RNA–Protein interactions for RNA: ENST00000394419.8

ACTN1-203, Transcript of actinin alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ACTN1, Length 3,464 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-203ENST00000394419 COX5AP20674 150 aa8.88□□□□□ -0.99
ACTN1-203ENST00000394419 ERVK-16P61578 105 aa8.88□□□□□ -0.99
ACTN1-203ENST00000394419 KRTAP27-1Q3LI81 207 aa8.88□□□□□ -0.99
ACTN1-203ENST00000394419 ZNF585BQ52M93 769 aa8.88□□□□□ -0.99
ACTN1-203ENST00000394419 TMEM41BQ5BJD5 291 aa8.88□□□□□ -0.99
ACTN1-203ENST00000394419 Q6P435 159 aa8.88□□□□□ -0.99
ACTN1-203ENST00000394419 ZNF66Q6ZN08 573 aa8.88□□□□□ -0.99
ACTN1-203ENST00000394419 LINC00596Q86U02 117 aa8.88□□□□□ -0.99
ACTN1-203ENST00000394419 OR13D1Q8NGV5 346 aa8.88□□□□□ -0.99
ACTN1-203ENST00000394419 PINX1Q96BK5 328 aaKnown RBP8.88□□□□□ -0.99
ACTN1-203ENST00000394419 GUCD1Q96NT3 240 aa8.88□□□□□ -0.99
ACTN1-203ENST00000394419 MGAQ8IWI9 3026 aa8.88□□□□□ -0.99
ACTN1-203ENST00000394419 TNRC18O15417 2968 aaPredicted RBP8.88□□□□□ -0.99
ACTN1-203ENST00000394419 DEFA6Q01524 100 aa8.88□□□□□ -0.99
ACTN1-203ENST00000394419 TFF3Q07654 80 aa8.88□□□□□ -0.99
ACTN1-203ENST00000394419 BSXQ3C1V8 233 aa8.88□□□□□ -0.99
ACTN1-203ENST00000394419 ZNF718Q3SXZ3 478 aa8.88□□□□□ -0.99
ACTN1-203ENST00000394419 ZNF497Q6ZNH5 498 aa8.88□□□□□ -0.99
ACTN1-203ENST00000394419 SSX7Q7RTT5 188 aa8.88□□□□□ -0.99
ACTN1-203ENST00000394419 SLC35E3Q7Z769 313 aa8.88□□□□□ -0.99
ACTN1-203ENST00000394419 MRGPRGQ86SM5 289 aa8.88□□□□□ -0.99
ACTN1-203ENST00000394419 ACTR3CQ9C0K3 210 aaPredicted RBP8.88□□□□□ -0.99
ACTN1-203ENST00000394419 SH3BGRL2Q9UJC5 107 aa8.88□□□□□ -0.99
ACTN1-203ENST00000394419 METRNQ9UJH8 293 aa8.88□□□□□ -0.99
ACTN1-203ENST00000394419 TNCP24821 2201 aa8.88□□□□□ -0.99
ACTN1-203ENST00000394419 ADAMTS20P59510 1910 aa8.88□□□□□ -0.99
ACTN1-203ENST00000394419 A0A1B0GV90 55 aa8.88□□□□□ -0.99
ACTN1-203ENST00000394419 PHOX2AO14813 284 aa8.88□□□□□ -0.99
ACTN1-203ENST00000394419 HIST1H2BKO60814 126 aa8.88□□□□□ -0.99
ACTN1-203ENST00000394419 WISP2O76076 250 aa8.88□□□□□ -0.99
ACTN1-203ENST00000394419 HIST1H2BJP06899 126 aa8.88□□□□□ -0.99
ACTN1-203ENST00000394419 HIST1H2BOP23527 126 aa8.88□□□□□ -0.99
ACTN1-203ENST00000394419 HIST1H2BBP33778 126 aa8.88□□□□□ -0.99
ACTN1-203ENST00000394419 HIST1H2BDP58876 126 aa8.88□□□□□ -0.99
ACTN1-203ENST00000394419 HIST1H2BCP62807 126 aa8.88□□□□□ -0.99
ACTN1-203ENST00000394419 HIST2H2BEQ16778 126 aa8.88□□□□□ -0.99
ACTN1-203ENST00000394419 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.88□□□□□ -0.99
ACTN1-203ENST00000394419 ODF3L1Q8IXM7 274 aa8.88□□□□□ -0.99
ACTN1-203ENST00000394419 HIST1H2BHQ93079 126 aa8.88□□□□□ -0.99
ACTN1-203ENST00000394419 HIST1H2BNQ99877 126 aa8.88□□□□□ -0.99
ACTN1-203ENST00000394419 HIST1H2BMQ99879 126 aa8.88□□□□□ -0.99
ACTN1-203ENST00000394419 APC2O95996 2303 aa8.88□□□□□ -0.99
ACTN1-203ENST00000394419 TRAV38-1A0A0B4J264 116 aa8.87□□□□□ -0.99
ACTN1-203ENST00000394419 MEF2BQ02080 365 aaPredicted RBP8.87□□□□□ -0.99
ACTN1-203ENST00000394419 DEFB109BQ30KR1 87 aa8.87□□□□□ -0.99
ACTN1-203ENST00000394419 C16orf82Q7Z2V1 217 aa8.87□□□□□ -0.99
ACTN1-203ENST00000394419 GFOD1Q9NXC2 390 aa8.87□□□□□ -0.99
ACTN1-203ENST00000394419 YLPM1P49750 1951 aaKnown RBP8.87□□□□□ -0.99
ACTN1-203ENST00000394419 SERF2P84101 59 aa8.87□□□□□ -0.99
ACTN1-203ENST00000394419 LRRC75BQ2VPJ9 315 aa8.87□□□□□ -0.99
ACTN1-203ENST00000394419 SMIM21Q3B7S5 101 aa8.87□□□□□ -0.99
ACTN1-203ENST00000394419 FAM214BQ7L5A3 538 aa8.87□□□□□ -0.99
ACTN1-203ENST00000394419 RPP25LQ8N5L8 163 aaKnown RBP8.87□□□□□ -0.99
ACTN1-203ENST00000394419 SSMEM1Q8WWF3 244 aa8.87□□□□□ -0.99
ACTN1-203ENST00000394419 LSM10Q969L4 123 aaKnown RBP8.87□□□□□ -0.99
ACTN1-203ENST00000394419 RAB24Q969Q5 203 aa8.87□□□□□ -0.99
ACTN1-203ENST00000394419 EGLN1Q9GZT9 426 aa8.87□□□□□ -0.99
ACTN1-203ENST00000394419 OR51M1Q9H341 326 aa8.87□□□□□ -0.99
ACTN1-203ENST00000394419 SPAARA0A1B0GVQ0 90 aa8.86□□□□□ -0.99
ACTN1-203ENST00000394419 OOEPA6NGQ2 149 aa8.86□□□□□ -0.99
ACTN1-203ENST00000394419 M0R1B8 84 aa8.86□□□□□ -0.99
ACTN1-203ENST00000394419 GALR1P47211 349 aa8.86□□□□□ -0.99
ACTN1-203ENST00000394419 CDX1P47902 265 aaPredicted RBP8.86□□□□□ -0.99
ACTN1-203ENST00000394419 CASP6P55212 293 aa8.86□□□□□ -0.99
ACTN1-203ENST00000394419 ZNF726P1Q15940 193 aa8.86□□□□□ -0.99
ACTN1-203ENST00000394419 FAM201AQ5SY85 155 aa8.86□□□□□ -0.99
ACTN1-203ENST00000394419 ZNF645Q8N7E2 425 aa8.86□□□□□ -0.99
ACTN1-203ENST00000394419 FDCSPQ8NFU4 85 aa8.86□□□□□ -0.99
ACTN1-203ENST00000394419 OR13A1Q8NGR1 328 aa8.86□□□□□ -0.99
ACTN1-203ENST00000394419 RHOVQ96L33 236 aa8.86□□□□□ -0.99
ACTN1-203ENST00000394419 WFIKKN1Q96NZ8 548 aa8.86□□□□□ -0.99
ACTN1-203ENST00000394419 TMEM147Q9BVK8 224 aa8.86□□□□□ -0.99
ACTN1-203ENST00000394419 ENY2Q9NPA8 101 aa8.86□□□□□ -0.99
ACTN1-203ENST00000394419 GCSAMLQ5JQS6 135 aa8.86□□□□□ -0.99
ACTN1-203ENST00000394419 Q6ZS49 121 aa8.86□□□□□ -0.99
ACTN1-203ENST00000394419 HAPLN4Q86UW8 402 aa8.86□□□□□ -0.99
ACTN1-203ENST00000394419 R3HDM4Q96D70 268 aa8.86□□□□□ -0.99
ACTN1-203ENST00000394419 GMPPAQ96IJ6 420 aaPredicted RBP8.86□□□□□ -0.99
ACTN1-203ENST00000394419 OPN3Q9H1Y3 402 aaPredicted RBP8.86□□□□□ -0.99
ACTN1-203ENST00000394419 SIRT7Q9NRC8 400 aa8.86□□□□□ -0.99
ACTN1-203ENST00000394419 AKAP6Q13023 2319 aa8.86□□□□□ -0.99
ACTN1-203ENST00000394419 PTBP3O95758 552 aaKnown RBP8.86□□□□□ -0.99
ACTN1-203ENST00000394419 CYB5R3P00387 301 aaPredicted RBP8.86□□□□□ -0.99
ACTN1-203ENST00000394419 SP9P0CG40 484 aa8.86□□□□□ -0.99
ACTN1-203ENST00000394419 FAM3BP58499 235 aaPredicted RBP8.86□□□□□ -0.99
ACTN1-203ENST00000394419 CDPF1Q6NVV7 123 aa8.86□□□□□ -0.99
ACTN1-203ENST00000394419 ACSM6Q6P461 480 aa8.86□□□□□ -0.99
ACTN1-203ENST00000394419 ZNRF1Q8ND25 227 aa8.86□□□□□ -0.99
ACTN1-203ENST00000394419 DEFB124Q8NES8 71 aa8.86□□□□□ -0.99
ACTN1-203ENST00000394419 PCGF1Q9BSM1 259 aa8.86□□□□□ -0.99
ACTN1-203ENST00000394419 LRRC30A6NM36 301 aa8.85□□□□□ -0.99
ACTN1-203ENST00000394419 SEC14L6B5MCN3 397 aa8.85□□□□□ -0.99
ACTN1-203ENST00000394419 C17orf112F2Z3M2 114 aa8.85□□□□□ -0.99
ACTN1-203ENST00000394419 CD59P13987 128 aa8.85□□□□□ -0.99
ACTN1-203ENST00000394419 HOXA5P20719 270 aa8.85□□□□□ -0.99
ACTN1-203ENST00000394419 CDC34P49427 236 aaPredicted RBP8.85□□□□□ -0.99
ACTN1-203ENST00000394419 TRIP6Q15654 476 aaKnown RBP8.85□□□□□ -0.99
ACTN1-203ENST00000394419 Q8NFD4 153 aa8.85□□□□□ -0.99
ACTN1-203ENST00000394419 OR51G1Q8NGK1 321 aa8.85□□□□□ -0.99
ACTN1-203ENST00000394419 CXXC4Q9H2H0 198 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms