RNA–Protein interactions for RNA: ENST00000389373.3

IFT88-203, Transcript of intraflagellar transport 88, humanhuman

TSL 4

Gene IFT88, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-203ENST00000389373 GABARAPL1Q9H0R8 117 aa7.17□□□□□ -1.26
IFT88-203ENST00000389373 CHMP1AQ9HD42 196 aaPredicted RBP7.17□□□□□ -1.26
IFT88-203ENST00000389373 SLC35D1Q9NTN3 355 aa7.17□□□□□ -1.26
IFT88-203ENST00000389373 ZNF230Q9UIE0 474 aaPredicted RBP7.17□□□□□ -1.26
IFT88-203ENST00000389373 EXOGQ9Y2C4 368 aaKnown RBP7.17□□□□□ -1.26
IFT88-203ENST00000389373 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.16□□□□□ -1.26
IFT88-203ENST00000389373 A0A1B0GVY2 172 aa7.16□□□□□ -1.26
IFT88-203ENST00000389373 PRSS29PA6NIE9 313 aa7.16□□□□□ -1.26
IFT88-203ENST00000389373 IGLL5B9A064 214 aa7.16□□□□□ -1.26
IFT88-203ENST00000389373 UBE2CO00762 179 aa7.16□□□□□ -1.26
IFT88-203ENST00000389373 GGCTO75223 188 aaKnown RBP7.16□□□□□ -1.26
IFT88-203ENST00000389373 GLAP06280 429 aa7.16□□□□□ -1.26
IFT88-203ENST00000389373 OR9G9P0C7N8 305 aa7.16□□□□□ -1.26
IFT88-203ENST00000389373 CTRB1P17538 263 aa7.16□□□□□ -1.26
IFT88-203ENST00000389373 ATF4P18848 351 aaPredicted RBP7.16□□□□□ -1.26
IFT88-203ENST00000389373 MRPL28Q13084 256 aaKnown RBP7.16□□□□□ -1.26
IFT88-203ENST00000389373 HMGN3Q15651 99 aa7.16□□□□□ -1.26
IFT88-203ENST00000389373 TNXAQ16473 311 aa7.16□□□□□ -1.26
IFT88-203ENST00000389373 CTRB2Q6GPI1 263 aa7.16□□□□□ -1.26
IFT88-203ENST00000389373 SIGIRRQ6IA17 410 aa7.16□□□□□ -1.26
IFT88-203ENST00000389373 PDPNQ86YL7 162 aa7.16□□□□□ -1.26
IFT88-203ENST00000389373 ZNF383Q8NA42 475 aa7.16□□□□□ -1.26
IFT88-203ENST00000389373 UXS1Q8NBZ7 420 aa7.16□□□□□ -1.26
IFT88-203ENST00000389373 ADAD2Q8NCV1 583 aaKnown RBP7.16□□□□□ -1.26
IFT88-203ENST00000389373 C11orf45Q8TAV5 145 aa7.16□□□□□ -1.26
IFT88-203ENST00000389373 FBLIM1Q8WUP2 373 aa7.16□□□□□ -1.26
IFT88-203ENST00000389373 FAAP24Q9BTP7 215 aa7.16□□□□□ -1.26
IFT88-203ENST00000389373 C11orf54Q9H0W9 315 aaPredicted RBP7.16□□□□□ -1.26
IFT88-203ENST00000389373 MLXQ9UH92 298 aa7.16□□□□□ -1.26
IFT88-203ENST00000389373 ZNF221Q9UK13 617 aa7.16□□□□□ -1.26
IFT88-203ENST00000389373 FAM90A7PA6NKC0 464 aa7.15□□□□□ -1.26
IFT88-203ENST00000389373 FAM223BA6NKX1 122 aa7.15□□□□□ -1.26
IFT88-203ENST00000389373 M0R1X1 148 aa7.15□□□□□ -1.26
IFT88-203ENST00000389373 PDCD6O75340 191 aa7.15□□□□□ -1.26
IFT88-203ENST00000389373 PROP1O75360 226 aa7.15□□□□□ -1.26
IFT88-203ENST00000389373 CIB2O75838 187 aa7.15□□□□□ -1.26
IFT88-203ENST00000389373 OR2J3O76001 311 aa7.15□□□□□ -1.26
IFT88-203ENST00000389373 IGLV2-23P01705 113 aa7.15□□□□□ -1.26
IFT88-203ENST00000389373 IGHV3-23P01764 117 aa7.15□□□□□ -1.26
IFT88-203ENST00000389373 BTNL8Q6UX41 500 aa7.15□□□□□ -1.26
IFT88-203ENST00000389373 RBPMS2Q6ZRY4 209 aaKnown RBP7.15□□□□□ -1.26
IFT88-203ENST00000389373 FAM223AQ8IWN6 122 aa7.15□□□□□ -1.26
IFT88-203ENST00000389373 SLC38A6Q8IZM9 456 aa7.15□□□□□ -1.26
IFT88-203ENST00000389373 OR1L6Q8NGR2 347 aa7.15□□□□□ -1.26
IFT88-203ENST00000389373 OR13C5Q8NGS8 318 aa7.15□□□□□ -1.26
IFT88-203ENST00000389373 TRUB1Q8WWH5 349 aaKnown RBP7.15□□□□□ -1.26
IFT88-203ENST00000389373 HARBI1Q96MB7 349 aa7.15□□□□□ -1.26
IFT88-203ENST00000389373 NEDD4LQ96PU5 975 aa7.15□□□□□ -1.26
IFT88-203ENST00000389373 OR14A2Q96R54 314 aa7.15□□□□□ -1.26
IFT88-203ENST00000389373 SULT4A1Q9BR01 284 aa7.15□□□□□ -1.26
IFT88-203ENST00000389373 MFFQ9GZY8 342 aa7.15□□□□□ -1.26
IFT88-203ENST00000389373 AMBNQ9NP70 447 aa7.15□□□□□ -1.26
IFT88-203ENST00000389373 ERVK13-1Q9NX77 482 aa7.15□□□□□ -1.26
IFT88-203ENST00000389373 OR1A1Q9P1Q5 309 aa7.15□□□□□ -1.26
IFT88-203ENST00000389373 GMPPBQ9Y5P6 360 aa7.15□□□□□ -1.26
IFT88-203ENST00000389373 S4R3C0 116 aa7.15□□□□□ -1.26
IFT88-203ENST00000389373 DNAH10Q8IVF4 4471 aa7.15□□□□□ -1.27
IFT88-203ENST00000389373 A0A1W2PPK0 400 aa7.14□□□□□ -1.27
IFT88-203ENST00000389373 SNTNA6NMZ2 147 aa7.14□□□□□ -1.27
IFT88-203ENST00000389373 LGALS9O00182 355 aa7.14□□□□□ -1.27
IFT88-203ENST00000389373 EBAG9O00559 213 aa7.14□□□□□ -1.27
IFT88-203ENST00000389373 SHOXO15266 292 aa7.14□□□□□ -1.27
IFT88-203ENST00000389373 CRYGBP07316 175 aa7.14□□□□□ -1.27
IFT88-203ENST00000389373 FCGR2BP31994 310 aaPredicted RBP7.14□□□□□ -1.27
IFT88-203ENST00000389373 FAM106AQ4KMX7 169 aa7.14□□□□□ -1.27
IFT88-203ENST00000389373 C1orf146Q5VVC0 180 aa7.14□□□□□ -1.27
IFT88-203ENST00000389373 MEDAGQ5VYS4 303 aa7.14□□□□□ -1.27
IFT88-203ENST00000389373 XAF1Q6GPH4 301 aa7.14□□□□□ -1.27
IFT88-203ENST00000389373 OR2C3Q8N628 320 aa7.14□□□□□ -1.27
IFT88-203ENST00000389373 EDARADDQ8WWZ3 215 aa7.14□□□□□ -1.27
IFT88-203ENST00000389373 ACOT12Q8WYK0 555 aa7.14□□□□□ -1.27
IFT88-203ENST00000389373 Q96M66 194 aa7.14□□□□□ -1.27
IFT88-203ENST00000389373 AGMATQ9BSE5 352 aa7.14□□□□□ -1.27
IFT88-203ENST00000389373 GABARAPL3Q9BY60 117 aa7.14□□□□□ -1.27
IFT88-203ENST00000389373 CKLFQ9UBR5 152 aa7.14□□□□□ -1.27
IFT88-203ENST00000389373 EXOSC1Q9Y3B2 195 aaKnown RBP7.14□□□□□ -1.27
IFT88-203ENST00000389373 AP4S1Q9Y587 144 aa7.14□□□□□ -1.27
IFT88-203ENST00000389373 TRAV8-7A0A075B6U6 113 aa7.13□□□□□ -1.27
IFT88-203ENST00000389373 M0R2N4 97 aa7.13□□□□□ -1.27
IFT88-203ENST00000389373 DEFB4AO15263 64 aa7.13□□□□□ -1.27
IFT88-203ENST00000389373 IGFBP3P17936 291 aaPredicted RBP7.13□□□□□ -1.27
IFT88-203ENST00000389373 ARL3P36405 182 aa7.13□□□□□ -1.27
IFT88-203ENST00000389373 CAPGP40121 348 aa7.13□□□□□ -1.27
IFT88-203ENST00000389373 MAP2K4P45985 399 aa7.13□□□□□ -1.27
IFT88-203ENST00000389373 SNRPGP62308 76 aaKnown RBP7.13□□□□□ -1.27
IFT88-203ENST00000389373 CBX3Q13185 183 aa7.13□□□□□ -1.27
IFT88-203ENST00000389373 C15orf32Q32M92 178 aa7.13□□□□□ -1.27
IFT88-203ENST00000389373 ZIK1Q3SY52 487 aaPredicted RBP7.13□□□□□ -1.27
IFT88-203ENST00000389373 ZNF585BQ52M93 769 aa7.13□□□□□ -1.27
IFT88-203ENST00000389373 RPL22L1Q6P5R6 122 aaKnown RBP7.13□□□□□ -1.27
IFT88-203ENST00000389373 CLEC19AQ6UXS0 136 aa7.13□□□□□ -1.27
IFT88-203ENST00000389373 C6orf201Q7Z4U5 140 aa7.13□□□□□ -1.27
IFT88-203ENST00000389373 SVOPQ8N4V2 548 aa7.13□□□□□ -1.27
IFT88-203ENST00000389373 OR5B3Q8NH48 314 aa7.13□□□□□ -1.27
IFT88-203ENST00000389373 SRSF12Q8WXF0 261 aaKnown RBP7.13□□□□□ -1.27
IFT88-203ENST00000389373 RARRES2Q99969 163 aa7.13□□□□□ -1.27
IFT88-203ENST00000389373 APLNQ9ULZ1 77 aa7.13□□□□□ -1.27
IFT88-203ENST00000389373 TRBV9A0A0B4J1U6 114 aa7.12□□□□□ -1.27
IFT88-203ENST00000389373 TMEM213A2RRL7 107 aa7.12□□□□□ -1.27
IFT88-203ENST00000389373 SAC3D1A6NKF1 404 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms