RNA–Protein interactions for RNA: ENST00000383738.6

CSPG5-202, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSPG5, Length 4,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-202ENST00000383738 SAP30LQ9HAJ7 183 aa16.11■□□□□ 0.17
CSPG5-202ENST00000383738 GLRX2Q9NS18 164 aa16.11■□□□□ 0.17
CSPG5-202ENST00000383738 C11orf94C9JXX5 98 aa16.11■□□□□ 0.17
CSPG5-202ENST00000383738 HSBP1O75506 76 aa16.11■□□□□ 0.17
CSPG5-202ENST00000383738 CNIH1O95406 144 aa16.11■□□□□ 0.17
CSPG5-202ENST00000383738 TCTAP57738 103 aa16.11■□□□□ 0.17
CSPG5-202ENST00000383738 MPC1Q9Y5U8 109 aa16.11■□□□□ 0.17
CSPG5-202ENST00000383738 AHRRA9YTQ3 701 aa16.11■□□□□ 0.17
CSPG5-202ENST00000383738 CYB5R3P00387 301 aaPredicted RBP16.11■□□□□ 0.17
CSPG5-202ENST00000383738 TMPRSS3P57727 454 aa16.11■□□□□ 0.17
CSPG5-202ENST00000383738 TMEM183BQ1AE95 376 aa16.11■□□□□ 0.17
CSPG5-202ENST00000383738 COL25A1Q9BXS0 654 aaPredicted RBP16.11■□□□□ 0.17
CSPG5-202ENST00000383738 MDH2P40926 338 aaKnown RBP16.1■□□□□ 0.17
CSPG5-202ENST00000383738 IER3P46695 156 aa16.1■□□□□ 0.17
CSPG5-202ENST00000383738 FAM201AQ5SY85 155 aa16.1■□□□□ 0.17
CSPG5-202ENST00000383738 HEPN1Q6WQI6 88 aa16.1■□□□□ 0.17
CSPG5-202ENST00000383738 SRP19P09132 144 aaKnown RBP16.1■□□□□ 0.17
CSPG5-202ENST00000383738 SPACA3Q8IXA5 215 aa16.1■□□□□ 0.17
CSPG5-202ENST00000383738 ZCCHC14Q8WYQ9 949 aaKnown RBP16.1■□□□□ 0.17
CSPG5-202ENST00000383738 OR5B21A6NL26 309 aa16.1■□□□□ 0.17
CSPG5-202ENST00000383738 MT-CO2P00403 227 aa16.1■□□□□ 0.17
CSPG5-202ENST00000383738 FOXF2Q12947 444 aa16.1■□□□□ 0.17
CSPG5-202ENST00000383738 ELOBQ15370 118 aa16.1■□□□□ 0.17
CSPG5-202ENST00000383738 INO80CQ6PI98 192 aaPredicted RBP16.1■□□□□ 0.17
CSPG5-202ENST00000383738 CIB3Q96Q77 187 aaPredicted RBP16.1■□□□□ 0.17
CSPG5-202ENST00000383738 UBTD1Q9HAC8 227 aa16.1■□□□□ 0.17
CSPG5-202ENST00000383738 RAB9BQ9NP90 201 aa16.1■□□□□ 0.17
CSPG5-202ENST00000383738 MYO9AB2RTY4 2548 aa16.09■□□□□ 0.17
CSPG5-202ENST00000383738 A0A0A6YYD4 124 aa16.09■□□□□ 0.17
CSPG5-202ENST00000383738 C5orf63A6NC05 138 aa16.09■□□□□ 0.17
CSPG5-202ENST00000383738 LHX2P50458 406 aa16.09■□□□□ 0.17
CSPG5-202ENST00000383738 CNN1P51911 297 aaKnown RBP16.09■□□□□ 0.17
CSPG5-202ENST00000383738 IL24Q13007 206 aa16.09■□□□□ 0.17
CSPG5-202ENST00000383738 TMEM30CPA0ZSE6 113 aa16.09■□□□□ 0.17
CSPG5-202ENST00000383738 CSRP1P21291 193 aaKnown RBP16.09■□□□□ 0.17
CSPG5-202ENST00000383738 HINT1P49773 126 aaPredicted RBP16.09■□□□□ 0.17
CSPG5-202ENST00000383738 MRPL54Q6P161 138 aaKnown RBP16.09■□□□□ 0.17
CSPG5-202ENST00000383738 MYOZ1Q9NP98 299 aaPredicted RBP16.09■□□□□ 0.17
CSPG5-202ENST00000383738 ZNF331Q9NQX6 463 aaPredicted RBP16.09■□□□□ 0.17
CSPG5-202ENST00000383738 SELENOKQ9Y6D0 94 aa16.09■□□□□ 0.17
CSPG5-202ENST00000383738 TRDCB7Z8K6 153 aa16.09■□□□□ 0.17
CSPG5-202ENST00000383738 GYPAP02724 150 aa16.09■□□□□ 0.17
CSPG5-202ENST00000383738 PTGDSP41222 190 aa16.09■□□□□ 0.17
CSPG5-202ENST00000383738 CPEB3Q8NE35 698 aaKnown RBP16.09■□□□□ 0.17
CSPG5-202ENST00000383738 SSMEM1Q8WWF3 244 aa16.09■□□□□ 0.17
CSPG5-202ENST00000383738 TRGV10A0A0A0MS01 117 aa16.08■□□□□ 0.17
CSPG5-202ENST00000383738 DUXBA0A1W2PPF3 345 aa16.08■□□□□ 0.17
CSPG5-202ENST00000383738 FCGR3BO75015 233 aa16.08■□□□□ 0.17
CSPG5-202ENST00000383738 HERPUD1Q15011 391 aa16.08■□□□□ 0.17
CSPG5-202ENST00000383738 NEIL1Q96FI4 390 aaPredicted RBP16.08■□□□□ 0.17
CSPG5-202ENST00000383738 TUBA4BQ9H853 241 aa16.08■□□□□ 0.17
CSPG5-202ENST00000383738 SPRR3Q9UBC9 169 aa16.08■□□□□ 0.17
CSPG5-202ENST00000383738 ADAMTS9Q9P2N4 1935 aa16.08■□□□□ 0.17
CSPG5-202ENST00000383738 LRP5LA4QPB2 252 aa16.08■□□□□ 0.16
CSPG5-202ENST00000383738 CTXN2P0C2S0 81 aa16.08■□□□□ 0.16
CSPG5-202ENST00000383738 CLDN18P56856 261 aa16.08■□□□□ 0.16
CSPG5-202ENST00000383738 P2RY6Q15077 328 aa16.08■□□□□ 0.16
CSPG5-202ENST00000383738 RIPPLY2Q5TAB7 128 aa16.08■□□□□ 0.16
CSPG5-202ENST00000383738 STARD4Q96DR4 205 aa16.08■□□□□ 0.16
CSPG5-202ENST00000383738 HIST1H2BLQ99880 126 aa16.08■□□□□ 0.16
CSPG5-202ENST00000383738 RNF212BA8MTL3 300 aa16.08■□□□□ 0.16
CSPG5-202ENST00000383738 ZNF253O75346 499 aa16.08■□□□□ 0.16
CSPG5-202ENST00000383738 CAMPP49913 170 aa16.08■□□□□ 0.16
CSPG5-202ENST00000383738 RPP30P78346 268 aaKnown RBP16.08■□□□□ 0.16
CSPG5-202ENST00000383738 OR2D2Q9H210 308 aa16.08■□□□□ 0.16
CSPG5-202ENST00000383738 CLN8Q9UBY8 286 aa16.08■□□□□ 0.16
CSPG5-202ENST00000383738 NAGKQ9UJ70 344 aa16.08■□□□□ 0.16
CSPG5-202ENST00000383738 FASNP49327 2511 aaKnown RBP16.08■□□□□ 0.16
CSPG5-202ENST00000383738 CHD3Q12873 2000 aaKnown RBP16.08■□□□□ 0.16
CSPG5-202ENST00000383738 NDUFB3O43676 98 aa16.08■□□□□ 0.16
CSPG5-202ENST00000383738 ISG15P05161 165 aa16.08■□□□□ 0.16
CSPG5-202ENST00000383738 OR2V2Q96R30 315 aa16.08■□□□□ 0.16
CSPG5-202ENST00000383738 ONECUT1Q9UBC0 465 aa16.08■□□□□ 0.16
CSPG5-202ENST00000383738 IGHV2-70P01814 119 aa16.07■□□□□ 0.16
CSPG5-202ENST00000383738 HSPB1P04792 205 aaKnown RBP16.07■□□□□ 0.16
CSPG5-202ENST00000383738 RNFT1Q5M7Z0 435 aa16.07■□□□□ 0.16
CSPG5-202ENST00000383738 KLF14Q8TD94 323 aaPredicted RBP16.07■□□□□ 0.16
CSPG5-202ENST00000383738 ITLN1Q8WWA0 313 aa16.07■□□□□ 0.16
CSPG5-202ENST00000383738 MARS2Q96GW9 593 aaKnown RBP16.07■□□□□ 0.16
CSPG5-202ENST00000383738 RAB40CQ96S21 281 aa16.07■□□□□ 0.16
CSPG5-202ENST00000383738 SLC35D1Q9NTN3 355 aa16.07■□□□□ 0.16
CSPG5-202ENST00000383738 MALRD1Q5VYJ5 2156 aa16.07■□□□□ 0.16
CSPG5-202ENST00000383738 NDUFB4O95168 129 aa16.07■□□□□ 0.16
CSPG5-202ENST00000383738 CDS2O95674 445 aa16.07■□□□□ 0.16
CSPG5-202ENST00000383738 TFF1P04155 84 aa16.07■□□□□ 0.16
CSPG5-202ENST00000383738 APELAP0DMC3 54 aa16.07■□□□□ 0.16
CSPG5-202ENST00000383738 MRPL13Q9BYD1 178 aaKnown RBP16.07■□□□□ 0.16
CSPG5-202ENST00000383738 CXXC4Q9H2H0 198 aa16.07■□□□□ 0.16
CSPG5-202ENST00000383738 FAM157AC9JC47 383 aa16.07■□□□□ 0.16
CSPG5-202ENST00000383738 WNT9BO14905 357 aa16.07■□□□□ 0.16
CSPG5-202ENST00000383738 TOX4O94842 621 aa16.07■□□□□ 0.16
CSPG5-202ENST00000383738 DEFA4P12838 97 aa16.07■□□□□ 0.16
CSPG5-202ENST00000383738 SLC35E3Q7Z769 313 aa16.07■□□□□ 0.16
CSPG5-202ENST00000383738 MRGPRGQ86SM5 289 aa16.07■□□□□ 0.16
CSPG5-202ENST00000383738 EDARADDQ8WWZ3 215 aa16.07■□□□□ 0.16
CSPG5-202ENST00000383738 WBP1Q96G27 269 aa16.07■□□□□ 0.16
CSPG5-202ENST00000383738 NOL4LQ96MY1 436 aaPredicted RBP16.07■□□□□ 0.16
CSPG5-202ENST00000383738 SEMA5BQ9P283 1151 aa16.07■□□□□ 0.16
CSPG5-202ENST00000383738 ARFGEF3Q5TH69 2177 aa16.07■□□□□ 0.16
CSPG5-202ENST00000383738 HAND1O96004 215 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms