RNA–Protein interactions for RNA: ENST00000382004.7

RFX3-204, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX3, Length 9,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-204ENST00000382004 GOLT1AQ6ZVE7 132 aa5.08□□□□□ -1.6
RFX3-204ENST00000382004 ST6GALNAC6Q969X2 333 aa5.08□□□□□ -1.6
RFX3-204ENST00000382004 MS4A3Q96HJ5 214 aa5.08□□□□□ -1.6
RFX3-204ENST00000382004 KCNS1Q96KK3 526 aa5.08□□□□□ -1.6
RFX3-204ENST00000382004 PEF1Q9UBV8 284 aaKnown RBP5.08□□□□□ -1.6
RFX3-204ENST00000382004 SERGEFQ9UGK8 458 aa5.08□□□□□ -1.6
RFX3-204ENST00000382004 IGHV3-49A0A0A0MS15 119 aa5.08□□□□□ -1.6
RFX3-204ENST00000382004 SERF2P84101 59 aa5.08□□□□□ -1.6
RFX3-204ENST00000382004 DMRTA1Q5VZB9 504 aa5.08□□□□□ -1.6
RFX3-204ENST00000382004 INO80CQ6PI98 192 aaPredicted RBP5.08□□□□□ -1.6
RFX3-204ENST00000382004 SFTA2Q6UW10 78 aa5.08□□□□□ -1.6
RFX3-204ENST00000382004 KIR3DL3Q8N743 410 aa5.08□□□□□ -1.6
RFX3-204ENST00000382004 TMEM106BQ9NUM4 274 aa5.08□□□□□ -1.6
RFX3-204ENST00000382004 MON2Q7Z3U7 1717 aa5.08□□□□□ -1.6
RFX3-204ENST00000382004 IGHV3OR16-13A0A075B7E8 117 aa5.08□□□□□ -1.6
RFX3-204ENST00000382004 IGHV3-74A0A0B4J1X5 117 aa5.08□□□□□ -1.6
RFX3-204ENST00000382004 IGLV3-27P01718 113 aa5.08□□□□□ -1.6
RFX3-204ENST00000382004 HSPB1P04792 205 aaKnown RBP5.08□□□□□ -1.6
RFX3-204ENST00000382004 CRYBB3P26998 211 aa5.08□□□□□ -1.6
RFX3-204ENST00000382004 DDTP30046 118 aa5.08□□□□□ -1.6
RFX3-204ENST00000382004 PIMREGQ9BSJ6 248 aa5.08□□□□□ -1.6
RFX3-204ENST00000382004 KNDC1Q76NI1 1749 aa5.08□□□□□ -1.6
RFX3-204ENST00000382004 TMEM250H0YL14 139 aa5.08□□□□□ -1.6
RFX3-204ENST00000382004 CCL3P10147 92 aa5.08□□□□□ -1.6
RFX3-204ENST00000382004 STARD6P59095 220 aa5.08□□□□□ -1.6
RFX3-204ENST00000382004 ZNF645Q8N7E2 425 aa5.08□□□□□ -1.6
RFX3-204ENST00000382004 DUX3Q96PT4 197 aa5.08□□□□□ -1.6
RFX3-204ENST00000382004 MUC21A0A0G2JKD1 596 aa5.08□□□□□ -1.6
RFX3-204ENST00000382004 MUC21A0A140T8X8 626 aa5.08□□□□□ -1.6
RFX3-204ENST00000382004 TCRBV5S1A1TA0A578 114 aa5.08□□□□□ -1.6
RFX3-204ENST00000382004 OGG1O15527 345 aa5.08□□□□□ -1.6
RFX3-204ENST00000382004 MUC21Q5SSG8 566 aa5.08□□□□□ -1.6
RFX3-204ENST00000382004 DMKNQ6E0U4 476 aaPredicted RBP5.08□□□□□ -1.6
RFX3-204ENST00000382004 C14orf144Q96I85 54 aa5.08□□□□□ -1.6
RFX3-204ENST00000382004 DNAJC4Q9NNZ3 241 aa5.08□□□□□ -1.6
RFX3-204ENST00000382004 OR5AC2Q9NZP5 309 aa5.08□□□□□ -1.6
RFX3-204ENST00000382004 ASPDHA6ND91 283 aa5.08□□□□□ -1.6
RFX3-204ENST00000382004 H3BRM9 83 aa5.08□□□□□ -1.6
RFX3-204ENST00000382004 FXYD1O00168 92 aa5.08□□□□□ -1.6
RFX3-204ENST00000382004 MC5RP33032 325 aa5.08□□□□□ -1.6
RFX3-204ENST00000382004 Q6ZNB5 142 aa5.08□□□□□ -1.6
RFX3-204ENST00000382004 C10orf111Q8N326 155 aa5.08□□□□□ -1.6
RFX3-204ENST00000382004 SF3B5Q9BWJ5 86 aaKnown RBP5.08□□□□□ -1.6
RFX3-204ENST00000382004 PLA2G2FQ9BZM2 168 aa5.08□□□□□ -1.6
RFX3-204ENST00000382004 OR51M1Q9H341 326 aa5.08□□□□□ -1.6
RFX3-204ENST00000382004 SELENOTP62341 195 aa5.08□□□□□ -1.6
RFX3-204ENST00000382004 CXorf66Q5JRM2 361 aaPredicted RBP5.08□□□□□ -1.6
RFX3-204ENST00000382004 LEAP2Q969E1 77 aa5.08□□□□□ -1.6
RFX3-204ENST00000382004 SCGB3A1Q96QR1 104 aa5.08□□□□□ -1.6
RFX3-204ENST00000382004 WNT10AQ9GZT5 417 aa5.08□□□□□ -1.6
RFX3-204ENST00000382004 KLK13Q9UKR3 277 aa5.08□□□□□ -1.6
RFX3-204ENST00000382004 KCNK7Q9Y2U2 307 aa5.08□□□□□ -1.6
RFX3-204ENST00000382004 PROB1E7EW31 1015 aa5.07□□□□□ -1.6
RFX3-204ENST00000382004 CFDP00746 253 aaPredicted RBP5.07□□□□□ -1.6
RFX3-204ENST00000382004 HOXA5P20719 270 aa5.07□□□□□ -1.6
RFX3-204ENST00000382004 NPPCP23582 126 aa5.07□□□□□ -1.6
RFX3-204ENST00000382004 PEAR1Q5VY43 1037 aaPredicted RBP5.07□□□□□ -1.6
RFX3-204ENST00000382004 UNQ9370/PRO34162Q6UXP9 181 aa5.07□□□□□ -1.6
RFX3-204ENST00000382004 LINC01555Q8NAE3 123 aa5.07□□□□□ -1.6
RFX3-204ENST00000382004 WNT2BQ93097 391 aa5.07□□□□□ -1.6
RFX3-204ENST00000382004 NRIP2Q9BQI9 281 aa5.07□□□□□ -1.6
RFX3-204ENST00000382004 CKAP5Q14008 2032 aa5.07□□□□□ -1.6
RFX3-204ENST00000382004 DERL1Q9BUN8 251 aa5.07□□□□□ -1.6
RFX3-204ENST00000382004 SSBP3Q9BWW4 388 aaPredicted RBP5.07□□□□□ -1.6
RFX3-204ENST00000382004 TLNRD1Q9H1K6 362 aa5.07□□□□□ -1.6
RFX3-204ENST00000382004 A0A0U1RQV5 110 aa5.07□□□□□ -1.6
RFX3-204ENST00000382004 CCL4P13236 92 aa5.07□□□□□ -1.6
RFX3-204ENST00000382004 AGAP20933 346 aa5.07□□□□□ -1.6
RFX3-204ENST00000382004 MEF2BQ02080 365 aaPredicted RBP5.07□□□□□ -1.6
RFX3-204ENST00000382004 CLPPQ16740 277 aaPredicted RBP5.07□□□□□ -1.6
RFX3-204ENST00000382004 C1orf185Q5T7R7 199 aa5.07□□□□□ -1.6
RFX3-204ENST00000382004 TNFSF18Q9UNG2 199 aa5.07□□□□□ -1.6
RFX3-204ENST00000382004 C1QL1O75973 258 aa5.07□□□□□ -1.6
RFX3-204ENST00000382004 SCTP09683 121 aa5.07□□□□□ -1.6
RFX3-204ENST00000382004 FBXW9Q5XUX1 488 aa5.07□□□□□ -1.6
RFX3-204ENST00000382004 OR2K2Q8NGT1 345 aa5.07□□□□□ -1.6
RFX3-204ENST00000382004 EEF1AKMT3Q96AZ1 226 aa5.07□□□□□ -1.6
RFX3-204ENST00000382004 QTRT1Q9BXR0 403 aaKnown RBP5.07□□□□□ -1.6
RFX3-204ENST00000382004 OPN3Q9H1Y3 402 aaPredicted RBP5.07□□□□□ -1.6
RFX3-204ENST00000382004 RPS11P62280 158 aaKnown RBP eCLIP5.07□□□□□ -1.6
RFX3-204ENST00000382004 PAX2Q02962 417 aa5.07□□□□□ -1.6
RFX3-204ENST00000382004 FAM60AQ9NP50 221 aa5.07□□□□□ -1.6
RFX3-204ENST00000382004 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.07□□□□□ -1.6
RFX3-204ENST00000382004 DSPPQ9NZW4 1301 aa5.07□□□□□ -1.6
RFX3-204ENST00000382004 ZFP36L2P47974 494 aaKnown RBP5.07□□□□□ -1.6
RFX3-204ENST00000382004 OR51G1Q8NGK1 321 aa5.07□□□□□ -1.6
RFX3-204ENST00000382004 ITLN1Q8WWA0 313 aa5.07□□□□□ -1.6
RFX3-204ENST00000382004 CALYQ9NYX4 217 aa5.07□□□□□ -1.6
RFX3-204ENST00000382004 RGPD2P0DJD1 1756 aa5.07□□□□□ -1.6
RFX3-204ENST00000382004 NUTF2P61970 127 aaKnown RBP5.07□□□□□ -1.6
RFX3-204ENST00000382004 PCSK4Q6UW60 755 aa5.07□□□□□ -1.6
RFX3-204ENST00000382004 MMD2Q8IY49 270 aa5.07□□□□□ -1.6
RFX3-204ENST00000382004 FAM89BQ8N5H3 189 aa5.07□□□□□ -1.6
RFX3-204ENST00000382004 GPHA2Q96T91 129 aa5.07□□□□□ -1.6
RFX3-204ENST00000382004 A0A1W2PRX2 142 aa5.06□□□□□ -1.6
RFX3-204ENST00000382004 VSIG8P0DPA2 414 aa5.06□□□□□ -1.6
RFX3-204ENST00000382004 SHISA5Q8N114 240 aa5.06□□□□□ -1.6
RFX3-204ENST00000382004 SPCS1Q9Y6A9 102 aa5.06□□□□□ -1.6
RFX3-204ENST00000382004 DOCK9Q9BZ29 2069 aa5.06□□□□□ -1.6
RFX3-204ENST00000382004 TRAV30A0A087WSZ9 112 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms