RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 HINT1P49773 126 aaPredicted RBP11.73□□□□□ -0.53
SDC1-202ENST00000381150 LRRC75BQ2VPJ9 315 aa11.73□□□□□ -0.53
SDC1-202ENST00000381150 C20orf204Q6ZNR8 217 aa11.73□□□□□ -0.53
SDC1-202ENST00000381150 Q6ZWC4 215 aa11.73□□□□□ -0.53
SDC1-202ENST00000381150 MKXQ8IYA7 352 aa11.73□□□□□ -0.53
SDC1-202ENST00000381150 ST6GALNAC3Q8NDV1 305 aa11.73□□□□□ -0.53
SDC1-202ENST00000381150 MBD3L1Q8WWY6 194 aa11.73□□□□□ -0.53
SDC1-202ENST00000381150 TCFL5Q9UL49 500 aa11.73□□□□□ -0.53
SDC1-202ENST00000381150 KIR2DS1A0A191URI9 304 aa11.73□□□□□ -0.53
SDC1-202ENST00000381150 FCN1O00602 326 aa11.73□□□□□ -0.53
SDC1-202ENST00000381150 ACP1P24666 158 aa11.73□□□□□ -0.53
SDC1-202ENST00000381150 KIR2DS4P43632 304 aa11.73□□□□□ -0.53
SDC1-202ENST00000381150 SERF2P84101 59 aa11.73□□□□□ -0.53
SDC1-202ENST00000381150 PSG4Q00888 419 aa11.73□□□□□ -0.53
SDC1-202ENST00000381150 KIR2DS1Q14954 304 aa11.73□□□□□ -0.53
SDC1-202ENST00000381150 ABLIM2Q6H8Q1 611 aa11.73□□□□□ -0.53
SDC1-202ENST00000381150 OR5AU1Q8NGC0 362 aa11.73□□□□□ -0.53
SDC1-202ENST00000381150 ANAPC16Q96DE5 110 aa11.73□□□□□ -0.53
SDC1-202ENST00000381150 MIEN1Q9BRT3 115 aa11.73□□□□□ -0.53
SDC1-202ENST00000381150 PPP1R14DQ9NXH3 145 aa11.73□□□□□ -0.53
SDC1-202ENST00000381150 TECTAO75443 2155 aa11.73□□□□□ -0.53
SDC1-202ENST00000381150 SYNGR1O43759 233 aa11.73□□□□□ -0.53
SDC1-202ENST00000381150 OTX2P32243 289 aa11.73□□□□□ -0.53
SDC1-202ENST00000381150 COL5A1-AS1Q5SY13 56 aa11.73□□□□□ -0.53
SDC1-202ENST00000381150 SIGLECL1Q8N7X8 197 aa11.73□□□□□ -0.53
SDC1-202ENST00000381150 ZNF114Q8NC26 417 aa11.73□□□□□ -0.53
SDC1-202ENST00000381150 F6UZH7 168 aa11.72□□□□□ -0.53
SDC1-202ENST00000381150 H0Y980 276 aa11.72□□□□□ -0.53
SDC1-202ENST00000381150 G6PCP35575 357 aa11.72□□□□□ -0.53
SDC1-202ENST00000381150 TCL1AP56279 114 aa11.72□□□□□ -0.53
SDC1-202ENST00000381150 AAED1Q7RTV5 226 aa11.72□□□□□ -0.53
SDC1-202ENST00000381150 TRAPPC2LQ9UL33 140 aa11.72□□□□□ -0.53
SDC1-202ENST00000381150 MRPS11P82912 194 aaKnown RBP11.72□□□□□ -0.53
SDC1-202ENST00000381150 SRYQ05066 204 aa11.72□□□□□ -0.53
SDC1-202ENST00000381150 MSMO1Q15800 293 aa11.72□□□□□ -0.53
SDC1-202ENST00000381150 GGNQ86UU5 652 aa11.72□□□□□ -0.53
SDC1-202ENST00000381150 OR5P3Q8WZ94 311 aa11.72□□□□□ -0.53
SDC1-202ENST00000381150 USF3Q68DE3 2245 aa11.72□□□□□ -0.53
SDC1-202ENST00000381150 RFPL3SP0C7P2 107 aa11.71□□□□□ -0.53
SDC1-202ENST00000381150 AMTP48728 403 aa11.71□□□□□ -0.53
SDC1-202ENST00000381150 SUMO1P63165 101 aaKnown RBP11.71□□□□□ -0.53
SDC1-202ENST00000381150 COTL1Q14019 142 aa11.71□□□□□ -0.53
SDC1-202ENST00000381150 PRR31Q5SQ13 230 aa11.71□□□□□ -0.53
SDC1-202ENST00000381150 FAM27BQ5VT28 67 aa11.71□□□□□ -0.53
SDC1-202ENST00000381150 ALKBH2Q6NS38 261 aa11.71□□□□□ -0.53
SDC1-202ENST00000381150 MRPL21Q7Z2W9 205 aaKnown RBP11.71□□□□□ -0.53
SDC1-202ENST00000381150 ZNF295-AS1Q8N0V1 137 aa11.71□□□□□ -0.53
SDC1-202ENST00000381150 ZDHHC16Q969W1 377 aa11.71□□□□□ -0.53
SDC1-202ENST00000381150 SLC25A6P12236 298 aa11.71□□□□□ -0.53
SDC1-202ENST00000381150 COX5AP20674 150 aa11.71□□□□□ -0.53
SDC1-202ENST00000381150 CLDN15P56746 228 aa11.71□□□□□ -0.53
SDC1-202ENST00000381150 RAC3P60763 192 aa11.71□□□□□ -0.53
SDC1-202ENST00000381150 LTC4SQ16873 150 aa11.71□□□□□ -0.53
SDC1-202ENST00000381150 NUFIP2Q7Z417 695 aaKnown RBP11.71□□□□□ -0.53
SDC1-202ENST00000381150 SPRY4Q9C004 299 aa11.71□□□□□ -0.53
SDC1-202ENST00000381150 C5orf49A4QMS7 147 aa11.71□□□□□ -0.54
SDC1-202ENST00000381150 FRMD6-AS1P0C7T7 363 aa11.71□□□□□ -0.54
SDC1-202ENST00000381150 COL8A2P25067 703 aa11.71□□□□□ -0.54
SDC1-202ENST00000381150 SRD5A2P31213 254 aa11.71□□□□□ -0.54
SDC1-202ENST00000381150 HNRNPA3P51991 378 aaKnown RBP11.71□□□□□ -0.54
SDC1-202ENST00000381150 COA6Q5JTJ3 125 aaKnown RBP11.71□□□□□ -0.54
SDC1-202ENST00000381150 OR10P1Q8NGE3 313 aa11.71□□□□□ -0.54
SDC1-202ENST00000381150 OR1L6Q8NGR2 347 aa11.71□□□□□ -0.54
SDC1-202ENST00000381150 RNASE8Q8TDE3 154 aaKnown RBP11.71□□□□□ -0.54
SDC1-202ENST00000381150 WDYHV1Q96HA8 205 aa11.71□□□□□ -0.54
SDC1-202ENST00000381150 SF3B5Q9BWJ5 86 aaKnown RBP11.71□□□□□ -0.54
SDC1-202ENST00000381150 FAM234AQ9H0X4 552 aa11.71□□□□□ -0.54
SDC1-202ENST00000381150 OR2W1Q9Y3N9 320 aa11.71□□□□□ -0.54
SDC1-202ENST00000381150 FREM1Q5H8C1 2179 aa11.71□□□□□ -0.54
SDC1-202ENST00000381150 CTXND1A0A1B0GTU2 59 aa11.7□□□□□ -0.54
SDC1-202ENST00000381150 ZNF716A6NP11 495 aa11.7□□□□□ -0.54
SDC1-202ENST00000381150 DIRC3C9JPN6 131 aa11.7□□□□□ -0.54
SDC1-202ENST00000381150 IGHEP01854 428 aa11.7□□□□□ -0.54
SDC1-202ENST00000381150 OR5G3P0C626 314 aa11.7□□□□□ -0.54
SDC1-202ENST00000381150 HTD2P86397 168 aa11.7□□□□□ -0.54
SDC1-202ENST00000381150 PRDX4Q13162 271 aa11.7□□□□□ -0.54
SDC1-202ENST00000381150 STARD4Q96DR4 205 aa11.7□□□□□ -0.54
SDC1-202ENST00000381150 ASCL3Q9NQ33 180 aa11.7□□□□□ -0.54
SDC1-202ENST00000381150 DEPPQ9NTK1 212 aa11.7□□□□□ -0.54
SDC1-202ENST00000381150 CRIM1Q9NZV1 1036 aa11.7□□□□□ -0.54
SDC1-202ENST00000381150 ZDBF2Q9HCK1 2354 aa11.7□□□□□ -0.54
SDC1-202ENST00000381150 KIR2DL5BA0A0G2JN68 375 aa11.7□□□□□ -0.54
SDC1-202ENST00000381150 KIR2DL5BA0A0G2JPC4 375 aa11.7□□□□□ -0.54
SDC1-202ENST00000381150 SNURFLB1AK76 121 aa11.7□□□□□ -0.54
SDC1-202ENST00000381150 SH2D1BO14796 132 aa11.7□□□□□ -0.54
SDC1-202ENST00000381150 DNPH1O43598 174 aa11.7□□□□□ -0.54
SDC1-202ENST00000381150 CXCL13O43927 109 aa11.7□□□□□ -0.54
SDC1-202ENST00000381150 IGKV1-5P01602 117 aa11.7□□□□□ -0.54
SDC1-202ENST00000381150 CRYGSP22914 178 aa11.7□□□□□ -0.54
SDC1-202ENST00000381150 SPATA45Q537H7 98 aa11.7□□□□□ -0.54
SDC1-202ENST00000381150 KIR2DL5AQ8N109 375 aa11.7□□□□□ -0.54
SDC1-202ENST00000381150 FOXB1Q99853 325 aa11.7□□□□□ -0.54
SDC1-202ENST00000381150 PYGO2Q9BRQ0 406 aa11.7□□□□□ -0.54
SDC1-202ENST00000381150 NPPCP23582 126 aa11.7□□□□□ -0.54
SDC1-202ENST00000381150 CDC34P49427 236 aaPredicted RBP11.7□□□□□ -0.54
SDC1-202ENST00000381150 SPATA46Q5T0L3 261 aa11.7□□□□□ -0.54
SDC1-202ENST00000381150 DCAF12Q5T6F0 453 aa11.7□□□□□ -0.54
SDC1-202ENST00000381150 TMEM105Q8N8V8 129 aa11.7□□□□□ -0.54
SDC1-202ENST00000381150 MRPL18Q9H0U6 180 aaKnown RBP11.7□□□□□ -0.54
SDC1-202ENST00000381150 MRPS18CQ9Y3D5 142 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms