RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 C2CD3Q4AC94 2353 aa10.15□□□□□ -0.78
SMN1-202ENST00000380707 A6NDX4 124 aa10.14□□□□□ -0.79
SMN1-202ENST00000380707 BTBD17A6NE02 478 aa10.14□□□□□ -0.79
SMN1-202ENST00000380707 H0YJW9 148 aa10.14□□□□□ -0.79
SMN1-202ENST00000380707 TNFSF12O43508 249 aa10.14□□□□□ -0.79
SMN1-202ENST00000380707 FAM106CPP0CH98 169 aa10.14□□□□□ -0.79
SMN1-202ENST00000380707 UCP3P55916 312 aa10.14□□□□□ -0.79
SMN1-202ENST00000380707 RPL30P62888 115 aaKnown RBP10.14□□□□□ -0.79
SMN1-202ENST00000380707 UBA52P62987 128 aaKnown RBP10.14□□□□□ -0.79
SMN1-202ENST00000380707 HNF4GQ14541 408 aa10.14□□□□□ -0.79
SMN1-202ENST00000380707 MSMO1Q15800 293 aa10.14□□□□□ -0.79
SMN1-202ENST00000380707 IDO2Q6ZQW0 420 aa10.14□□□□□ -0.79
SMN1-202ENST00000380707 THNSL2Q86YJ6 484 aa10.14□□□□□ -0.79
SMN1-202ENST00000380707 BVESQ8NE79 360 aa10.14□□□□□ -0.79
SMN1-202ENST00000380707 OR5AN1Q8NGI8 311 aa10.14□□□□□ -0.79
SMN1-202ENST00000380707 OR13C8Q8NGS7 320 aa10.14□□□□□ -0.79
SMN1-202ENST00000380707 DEDD2Q8WXF8 326 aa10.14□□□□□ -0.79
SMN1-202ENST00000380707 PRRT1Q99946 306 aa10.14□□□□□ -0.79
SMN1-202ENST00000380707 RSRP1Q9BUV0 290 aa10.14□□□□□ -0.79
SMN1-202ENST00000380707 SLC2A8Q9NY64 477 aa10.14□□□□□ -0.79
SMN1-202ENST00000380707 PLA2G10O15496 165 aa10.13□□□□□ -0.79
SMN1-202ENST00000380707 RNASE1P07998 156 aaKnown RBP10.13□□□□□ -0.79
SMN1-202ENST00000380707 FAUP35544 74 aaKnown RBP10.13□□□□□ -0.79
SMN1-202ENST00000380707 EBI3Q14213 229 aa10.13□□□□□ -0.79
SMN1-202ENST00000380707 HES1Q14469 280 aa10.13□□□□□ -0.79
SMN1-202ENST00000380707 LPCAT3Q6P1A2 487 aa10.13□□□□□ -0.79
SMN1-202ENST00000380707 SLC38A6Q8IZM9 456 aa10.13□□□□□ -0.79
SMN1-202ENST00000380707 ZBTB34Q8NCN2 500 aa10.13□□□□□ -0.79
SMN1-202ENST00000380707 MARCH1Q8TCQ1 289 aa10.13□□□□□ -0.79
SMN1-202ENST00000380707 DDB2Q92466 427 aa10.13□□□□□ -0.79
SMN1-202ENST00000380707 EAF1Q96JC9 268 aaPredicted RBP10.13□□□□□ -0.79
SMN1-202ENST00000380707 AKR1E2Q96JD6 320 aa10.13□□□□□ -0.79
SMN1-202ENST00000380707 RITA1Q96K30 269 aa10.13□□□□□ -0.79
SMN1-202ENST00000380707 PLA2G2EQ9NZK7 142 aa10.13□□□□□ -0.79
SMN1-202ENST00000380707 SCP2D1Q9UJQ7 156 aa10.13□□□□□ -0.79
SMN1-202ENST00000380707 GPR31O00270 319 aa10.12□□□□□ -0.79
SMN1-202ENST00000380707 CHST1O43916 411 aa10.12□□□□□ -0.79
SMN1-202ENST00000380707 MOSP00540 346 aa10.12□□□□□ -0.79
SMN1-202ENST00000380707 IGKV1-16P04430 117 aa10.12□□□□□ -0.79
SMN1-202ENST00000380707 PGAM2P15259 253 aa10.12□□□□□ -0.79
SMN1-202ENST00000380707 PI3P19957 117 aa10.12□□□□□ -0.79
SMN1-202ENST00000380707 MC5RP33032 325 aa10.12□□□□□ -0.79
SMN1-202ENST00000380707 THBS3P49746 956 aa10.12□□□□□ -0.79
SMN1-202ENST00000380707 IFITM3Q01628 133 aa10.12□□□□□ -0.79
SMN1-202ENST00000380707 PHLDA2Q53GA4 152 aa10.12□□□□□ -0.79
SMN1-202ENST00000380707 C16orf87Q6PH81 154 aa10.12□□□□□ -0.79
SMN1-202ENST00000380707 Q8N6K4 173 aa10.12□□□□□ -0.79
SMN1-202ENST00000380707 OR2T10Q8NGZ9 312 aa10.12□□□□□ -0.79
SMN1-202ENST00000380707 HSD17B10Q99714 261 aaKnown RBP10.12□□□□□ -0.79
SMN1-202ENST00000380707 PITPNC1Q9UKF7 332 aa10.12□□□□□ -0.79
SMN1-202ENST00000380707 FAM181BA6NEQ2 426 aa10.12□□□□□ -0.79
SMN1-202ENST00000380707 H7C2Y5 167 aa10.12□□□□□ -0.79
SMN1-202ENST00000380707 GPR137BO60478 399 aa10.12□□□□□ -0.79
SMN1-202ENST00000380707 PGLYRP1O75594 196 aaPredicted RBP10.12□□□□□ -0.79
SMN1-202ENST00000380707 UPK1BO75841 260 aa10.12□□□□□ -0.79
SMN1-202ENST00000380707 TMEM11P17152 192 aa10.12□□□□□ -0.79
SMN1-202ENST00000380707 BTCP35070 178 aa10.12□□□□□ -0.79
SMN1-202ENST00000380707 BRWD1-AS2P59051 145 aa10.12□□□□□ -0.79
SMN1-202ENST00000380707 ZNF66Q6ZN08 573 aa10.12□□□□□ -0.79
SMN1-202ENST00000380707 KCTD9Q7L273 389 aa10.12□□□□□ -0.79
SMN1-202ENST00000380707 CMTM1Q8IZ96 169 aa10.12□□□□□ -0.79
SMN1-202ENST00000380707 TCTEX1D2Q8WW35 142 aa10.12□□□□□ -0.79
SMN1-202ENST00000380707 BORCS5Q969J3 196 aa10.12□□□□□ -0.79
SMN1-202ENST00000380707 ADTRPQ96IZ2 230 aa10.12□□□□□ -0.79
SMN1-202ENST00000380707 RBM14Q96PK6 669 aaKnown RBP10.12□□□□□ -0.79
SMN1-202ENST00000380707 WASHC3Q9Y3C0 194 aa10.12□□□□□ -0.79
SMN1-202ENST00000380707 TENM1Q9UKZ4 2725 aa10.12□□□□□ -0.79
SMN1-202ENST00000380707 NAP1L6A6NFF2 107 aa10.11□□□□□ -0.79
SMN1-202ENST00000380707 OR2F2O95006 317 aa10.11□□□□□ -0.79
SMN1-202ENST00000380707 APOA2P02652 100 aa10.11□□□□□ -0.79
SMN1-202ENST00000380707 RLN1P04808 185 aa10.11□□□□□ -0.79
SMN1-202ENST00000380707 ECI1P42126 302 aa10.11□□□□□ -0.79
SMN1-202ENST00000380707 CCR6P51684 374 aa10.11□□□□□ -0.79
SMN1-202ENST00000380707 F2RL1P55085 397 aa10.11□□□□□ -0.79
SMN1-202ENST00000380707 SURF2Q15527 256 aaPredicted RBP10.11□□□□□ -0.79
SMN1-202ENST00000380707 OR2B11Q5JQS5 317 aa10.11□□□□□ -0.79
SMN1-202ENST00000380707 LIAT1Q6ZQX7 453 aa10.11□□□□□ -0.79
SMN1-202ENST00000380707 OR51H1Q8NH63 302 aa10.11□□□□□ -0.79
SMN1-202ENST00000380707 ZFAND1Q8TCF1 268 aa10.11□□□□□ -0.79
SMN1-202ENST00000380707 TAF15Q92804 592 aaKnown RBP eCLIP10.11□□□□□ -0.79
SMN1-202ENST00000380707 ZNF486Q96H40 463 aaPredicted RBP10.11□□□□□ -0.79
SMN1-202ENST00000380707 TSC22D3Q99576 134 aa10.11□□□□□ -0.79
SMN1-202ENST00000380707 RTBDNQ9BSG5 229 aaPredicted RBP10.11□□□□□ -0.79
SMN1-202ENST00000380707 SLC25A33Q9BSK2 321 aa10.11□□□□□ -0.79
SMN1-202ENST00000380707 C5orf66Q9H5L9 145 aa10.11□□□□□ -0.79
SMN1-202ENST00000380707 SLC2A9Q9NRM0 540 aa10.11□□□□□ -0.79
SMN1-202ENST00000380707 PLSCR3Q9NRY6 295 aa10.11□□□□□ -0.79
SMN1-202ENST00000380707 SLC35D1Q9NTN3 355 aa10.11□□□□□ -0.79
SMN1-202ENST00000380707 TBC1D24Q9ULP9 559 aa10.11□□□□□ -0.79
SMN1-202ENST00000380707 GPR132Q9UNW8 380 aa10.11□□□□□ -0.79
SMN1-202ENST00000380707 CENPXA8MT69 81 aa10.1□□□□□ -0.79
SMN1-202ENST00000380707 TRIM77I1YAP6 450 aa10.1□□□□□ -0.79
SMN1-202ENST00000380707 LYRM1O43325 122 aa10.1□□□□□ -0.79
SMN1-202ENST00000380707 RAMP3O60896 148 aa10.1□□□□□ -0.79
SMN1-202ENST00000380707 FCGR3BO75015 233 aa10.1□□□□□ -0.79
SMN1-202ENST00000380707 PEX14O75381 377 aa10.1□□□□□ -0.79
SMN1-202ENST00000380707 CNTFRP26992 372 aa10.1□□□□□ -0.79
SMN1-202ENST00000380707 PIGPP57054 158 aa10.1□□□□□ -0.79
SMN1-202ENST00000380707 TAGLNQ01995 201 aaKnown RBP10.1□□□□□ -0.79
SMN1-202ENST00000380707 ABCA11PQ4W5N1 156 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms