RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 SAP25Q8TEE9 199 aa9.67□□□□□ -0.86
SMAD9-202ENST00000379826 LRRC29Q8WV35 223 aa9.67□□□□□ -0.86
SMAD9-202ENST00000379826 H1FXQ92522 213 aaKnown RBP9.67□□□□□ -0.86
SMAD9-202ENST00000379826 ZNF331Q9NQX6 463 aaPredicted RBP9.67□□□□□ -0.86
SMAD9-202ENST00000379826 C2orf16Q68DN1 1984 aa9.67□□□□□ -0.86
SMAD9-202ENST00000379826 IGLV3-12A0A075B6K2 115 aa9.67□□□□□ -0.86
SMAD9-202ENST00000379826 ENSAO43768 121 aaKnown RBP9.67□□□□□ -0.86
SMAD9-202ENST00000379826 VKORC1L1Q8N0U8 176 aa9.67□□□□□ -0.86
SMAD9-202ENST00000379826 ZNF525Q8N782 197 aa9.67□□□□□ -0.86
SMAD9-202ENST00000379826 SGMS2Q8NHU3 365 aa9.67□□□□□ -0.86
SMAD9-202ENST00000379826 OR5P3Q8WZ94 311 aa9.67□□□□□ -0.86
SMAD9-202ENST00000379826 RAB24Q969Q5 203 aa9.67□□□□□ -0.86
SMAD9-202ENST00000379826 NAGKQ9UJ70 344 aa9.67□□□□□ -0.86
SMAD9-202ENST00000379826 IGLV3-32A0A0A0MS00 114 aa9.67□□□□□ -0.86
SMAD9-202ENST00000379826 LRRC75BQ2VPJ9 315 aa9.67□□□□□ -0.86
SMAD9-202ENST00000379826 DRAM1Q8N682 238 aa9.67□□□□□ -0.86
SMAD9-202ENST00000379826 ZNF645Q8N7E2 425 aa9.67□□□□□ -0.86
SMAD9-202ENST00000379826 LRTM2Q8N967 370 aa9.67□□□□□ -0.86
SMAD9-202ENST00000379826 OR8G5Q8NG78 346 aa9.67□□□□□ -0.86
SMAD9-202ENST00000379826 OR4P4Q8NGL7 312 aa9.67□□□□□ -0.86
SMAD9-202ENST00000379826 HS3ST6Q96QI5 342 aa9.67□□□□□ -0.86
SMAD9-202ENST00000379826 IL36GQ9NZH8 169 aa9.67□□□□□ -0.86
SMAD9-202ENST00000379826 FAM90A10PA6NDY2 464 aa9.66□□□□□ -0.86
SMAD9-202ENST00000379826 FAM90A18PA6NE21 464 aa9.66□□□□□ -0.86
SMAD9-202ENST00000379826 FAM90A16PA6NEW6 464 aa9.66□□□□□ -0.86
SMAD9-202ENST00000379826 FAM90A20PA6NIJ5 464 aa9.66□□□□□ -0.86
SMAD9-202ENST00000379826 FAM90A8PA6NJQ4 464 aa9.66□□□□□ -0.86
SMAD9-202ENST00000379826 FAM90A7PA6NKC0 464 aa9.66□□□□□ -0.86
SMAD9-202ENST00000379826 FAM90A22PA8MWA6 464 aa9.66□□□□□ -0.86
SMAD9-202ENST00000379826 FAM90A12PA8MX19 464 aa9.66□□□□□ -0.86
SMAD9-202ENST00000379826 FAM90A5PA8MXJ8 464 aa9.66□□□□□ -0.86
SMAD9-202ENST00000379826 FAM90A23PA8MXZ1 464 aa9.66□□□□□ -0.86
SMAD9-202ENST00000379826 FAM90A15PP0C7V4 464 aa9.66□□□□□ -0.86
SMAD9-202ENST00000379826 FAM90A13PP0C7W8 464 aa9.66□□□□□ -0.86
SMAD9-202ENST00000379826 FAM90A14PP0C7W9 464 aa9.66□□□□□ -0.86
SMAD9-202ENST00000379826 FAM90A24PP0C7X0 464 aa9.66□□□□□ -0.86
SMAD9-202ENST00000379826 CRISP2P16562 243 aa9.66□□□□□ -0.86
SMAD9-202ENST00000379826 OR10G8Q8NGN5 311 aa9.66□□□□□ -0.86
SMAD9-202ENST00000379826 PLSCR2Q9NRY7 297 aa9.66□□□□□ -0.86
SMAD9-202ENST00000379826 KCNIP2Q9NS61 270 aa9.66□□□□□ -0.86
SMAD9-202ENST00000379826 CEACAM18A8MTB9 384 aa9.66□□□□□ -0.86
SMAD9-202ENST00000379826 B4E171 279 aa9.66□□□□□ -0.86
SMAD9-202ENST00000379826 SPRY3O43610 288 aa9.66□□□□□ -0.86
SMAD9-202ENST00000379826 HBZP02008 142 aa9.66□□□□□ -0.86
SMAD9-202ENST00000379826 TSPAN7P41732 249 aa9.66□□□□□ -0.86
SMAD9-202ENST00000379826 GNG4P50150 75 aa9.66□□□□□ -0.86
SMAD9-202ENST00000379826 RALGAPA1Q6GYQ0 2036 aa9.66□□□□□ -0.86
SMAD9-202ENST00000379826 DNPH1O43598 174 aa9.66□□□□□ -0.86
SMAD9-202ENST00000379826 DEFA4P12838 97 aa9.66□□□□□ -0.86
SMAD9-202ENST00000379826 OR10J1P30954 320 aa9.66□□□□□ -0.86
SMAD9-202ENST00000379826 SEBOXQ9HB31 216 aaPredicted RBP9.66□□□□□ -0.86
SMAD9-202ENST00000379826 YAE1D1Q9NRH1 226 aa9.66□□□□□ -0.86
SMAD9-202ENST00000379826 ABCA7Q8IZY2 2146 aa9.66□□□□□ -0.86
SMAD9-202ENST00000379826 PDE6DO43924 150 aa9.66□□□□□ -0.86
SMAD9-202ENST00000379826 KBTBD11O94819 623 aa9.66□□□□□ -0.86
SMAD9-202ENST00000379826 FGF5P12034 268 aa9.66□□□□□ -0.86
SMAD9-202ENST00000379826 CD81P60033 236 aa9.66□□□□□ -0.86
SMAD9-202ENST00000379826 PAX5Q02548 391 aa9.66□□□□□ -0.86
SMAD9-202ENST00000379826 ACSM6Q6P461 480 aa9.66□□□□□ -0.86
SMAD9-202ENST00000379826 SPSB3Q6PJ21 355 aa9.66□□□□□ -0.86
SMAD9-202ENST00000379826 ACY3Q96HD9 319 aa9.66□□□□□ -0.86
SMAD9-202ENST00000379826 MUC22E2RYF6 1773 aaPredicted RBP9.66□□□□□ -0.86
SMAD9-202ENST00000379826 CD1BP29016 333 aa9.66□□□□□ -0.86
SMAD9-202ENST00000379826 TAS2R60P59551 318 aa9.66□□□□□ -0.86
SMAD9-202ENST00000379826 TIGITQ495A1 244 aa9.66□□□□□ -0.86
SMAD9-202ENST00000379826 KRTCAP3Q53RY4 240 aa9.66□□□□□ -0.86
SMAD9-202ENST00000379826 C1QL4Q86Z23 238 aa9.66□□□□□ -0.86
SMAD9-202ENST00000379826 C1QTNF5Q9BXJ0 243 aa9.66□□□□□ -0.86
SMAD9-202ENST00000379826 ZNF355PQ9NSJ1 428 aa9.66□□□□□ -0.86
SMAD9-202ENST00000379826 NKX6-3A6NJ46 265 aa9.65□□□□□ -0.86
SMAD9-202ENST00000379826 TMEM183BQ1AE95 376 aa9.65□□□□□ -0.86
SMAD9-202ENST00000379826 RNF151Q2KHN1 245 aa9.65□□□□□ -0.86
SMAD9-202ENST00000379826 C17orf82Q86X59 251 aaPredicted RBP9.65□□□□□ -0.86
SMAD9-202ENST00000379826 HIST1H2BLQ99880 126 aa9.65□□□□□ -0.86
SMAD9-202ENST00000379826 RAB1BQ9H0U4 201 aa9.65□□□□□ -0.86
SMAD9-202ENST00000379826 A0A0G2JRQ6 117 aa9.65□□□□□ -0.86
SMAD9-202ENST00000379826 HSD17B10Q99714 261 aaKnown RBP9.65□□□□□ -0.86
SMAD9-202ENST00000379826 RAMP3O60896 148 aa9.65□□□□□ -0.86
SMAD9-202ENST00000379826 GCGP01275 180 aa9.65□□□□□ -0.86
SMAD9-202ENST00000379826 LYPD6Q86Y78 171 aa9.65□□□□□ -0.86
SMAD9-202ENST00000379826 HSBP1L1C9JCN9 74 aa9.65□□□□□ -0.87
SMAD9-202ENST00000379826 HIST1H1BP16401 226 aaKnown RBP9.65□□□□□ -0.87
SMAD9-202ENST00000379826 MIC13Q5XKP0 118 aa9.65□□□□□ -0.87
SMAD9-202ENST00000379826 PLPPR1Q8TBJ4 325 aa9.65□□□□□ -0.87
SMAD9-202ENST00000379826 LSM10Q969L4 123 aaKnown RBP9.65□□□□□ -0.87
SMAD9-202ENST00000379826 ABHD17AQ96GS6 310 aa9.65□□□□□ -0.87
SMAD9-202ENST00000379826 TMEM68Q96MH6 324 aa9.65□□□□□ -0.87
SMAD9-202ENST00000379826 CCL19Q99731 98 aa9.65□□□□□ -0.87
SMAD9-202ENST00000379826 QTRT1Q9BXR0 403 aaKnown RBP9.65□□□□□ -0.87
SMAD9-202ENST00000379826 SRD5A3Q9H8P0 318 aa9.65□□□□□ -0.87
SMAD9-202ENST00000379826 PINLYPA6NC86 204 aa9.64□□□□□ -0.87
SMAD9-202ENST00000379826 WNT9BO14905 357 aa9.64□□□□□ -0.87
SMAD9-202ENST00000379826 PPIHO43447 177 aaKnown RBP9.64□□□□□ -0.87
SMAD9-202ENST00000379826 ARL14EPLP0DKL9 152 aa9.64□□□□□ -0.87
SMAD9-202ENST00000379826 FOXG1P55316 489 aaPredicted RBP9.64□□□□□ -0.87
SMAD9-202ENST00000379826 ID3Q02535 119 aa9.64□□□□□ -0.87
SMAD9-202ENST00000379826 MRPL54Q6P161 138 aaKnown RBP9.64□□□□□ -0.87
SMAD9-202ENST00000379826 MRPL14Q6P1L8 145 aaKnown RBP9.64□□□□□ -0.87
SMAD9-202ENST00000379826 DPF1Q92782 380 aa9.64□□□□□ -0.87
SMAD9-202ENST00000379826 TPPP3Q9BW30 176 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms