RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 AADACP22760 399 aa13.46□□□□□ -0.25
PDLIM4-202ENST00000379018 HTR2CP28335 458 aa13.46□□□□□ -0.25
PDLIM4-202ENST00000379018 SSBP2P81877 361 aaPredicted RBP13.46□□□□□ -0.25
PDLIM4-202ENST00000379018 MED21Q13503 144 aa13.46□□□□□ -0.25
PDLIM4-202ENST00000379018 PMS2P11Q13670 270 aa13.46□□□□□ -0.25
PDLIM4-202ENST00000379018 CD300EQ496F6 205 aaPredicted RBP13.46□□□□□ -0.25
PDLIM4-202ENST00000379018 MOB1BQ7L9L4 216 aa13.46□□□□□ -0.25
PDLIM4-202ENST00000379018 PDPNQ86YL7 162 aa13.46□□□□□ -0.25
PDLIM4-202ENST00000379018 ZNF555Q8NEP9 628 aa13.46□□□□□ -0.25
PDLIM4-202ENST00000379018 LINC00476Q8WZB0 136 aa13.46□□□□□ -0.25
PDLIM4-202ENST00000379018 TMEM80Q96HE8 168 aa13.46□□□□□ -0.25
PDLIM4-202ENST00000379018 UQCC2Q9BRT2 126 aa13.46□□□□□ -0.25
PDLIM4-202ENST00000379018 TINAGL1Q9GZM7 467 aaPredicted RBP13.46□□□□□ -0.25
PDLIM4-202ENST00000379018 SLC35D1Q9NTN3 355 aa13.46□□□□□ -0.25
PDLIM4-202ENST00000379018 PLEKHJ1Q9NW61 149 aa13.46□□□□□ -0.25
PDLIM4-202ENST00000379018 PEMTQ9UBM1 199 aa13.46□□□□□ -0.25
PDLIM4-202ENST00000379018 PROP1O75360 226 aa13.45□□□□□ -0.26
PDLIM4-202ENST00000379018 OR2A4O95047 310 aa13.45□□□□□ -0.26
PDLIM4-202ENST00000379018 NAPSAO96009 420 aa13.45□□□□□ -0.26
PDLIM4-202ENST00000379018 CELP19835 753 aa13.45□□□□□ -0.26
PDLIM4-202ENST00000379018 ZBTB25P24278 435 aa13.45□□□□□ -0.26
PDLIM4-202ENST00000379018 RPS27AP62979 156 aaKnown RBP13.45□□□□□ -0.26
PDLIM4-202ENST00000379018 HLA-DRB3P79483 266 aa13.45□□□□□ -0.26
PDLIM4-202ENST00000379018 ZNF343Q6P1L6 599 aa13.45□□□□□ -0.26
PDLIM4-202ENST00000379018 LINC00322Q6ZN03 302 aaPredicted RBP13.45□□□□□ -0.26
PDLIM4-202ENST00000379018 GHRLQ9UBU3 117 aa13.45□□□□□ -0.26
PDLIM4-202ENST00000379018 OR11H12B2RN74 326 aa13.44□□□□□ -0.26
PDLIM4-202ENST00000379018 RBMXL2O75526 392 aaKnown RBP13.44□□□□□ -0.26
PDLIM4-202ENST00000379018 SCTP09683 121 aa13.44□□□□□ -0.26
PDLIM4-202ENST00000379018 INSL4Q14641 139 aa13.44□□□□□ -0.26
PDLIM4-202ENST00000379018 ZNF880Q6PDB4 577 aa13.44□□□□□ -0.26
PDLIM4-202ENST00000379018 IZUMO2Q6UXV1 221 aa13.44□□□□□ -0.26
PDLIM4-202ENST00000379018 GGHQ92820 318 aa13.44□□□□□ -0.26
PDLIM4-202ENST00000379018 SNAPC3Q92966 411 aa13.44□□□□□ -0.26
PDLIM4-202ENST00000379018 HARBI1Q96MB7 349 aa13.44□□□□□ -0.26
PDLIM4-202ENST00000379018 AK3Q9UIJ7 227 aa13.44□□□□□ -0.26
PDLIM4-202ENST00000379018 RAB26Q9ULW5 256 aa13.44□□□□□ -0.26
PDLIM4-202ENST00000379018 CXorf65A6NEN9 183 aa13.43□□□□□ -0.26
PDLIM4-202ENST00000379018 ITGB1BP1O14713 200 aa13.43□□□□□ -0.26
PDLIM4-202ENST00000379018 MPPED1O15442 326 aa13.43□□□□□ -0.26
PDLIM4-202ENST00000379018 IGLV2-23P01705 113 aa13.43□□□□□ -0.26
PDLIM4-202ENST00000379018 PRH1P02810 166 aa13.43□□□□□ -0.26
PDLIM4-202ENST00000379018 UBBP0CG47 229 aa13.43□□□□□ -0.26
PDLIM4-202ENST00000379018 TAS2R43P59537 309 aa13.43□□□□□ -0.26
PDLIM4-202ENST00000379018 EXOSC2Q13868 293 aaKnown RBP13.43□□□□□ -0.26
PDLIM4-202ENST00000379018 RBM48Q5RL73 367 aaKnown RBP13.43□□□□□ -0.26
PDLIM4-202ENST00000379018 PACRGLQ8N7B6 248 aa13.43□□□□□ -0.26
PDLIM4-202ENST00000379018 USMG5Q96IX5 58 aa13.43□□□□□ -0.26
PDLIM4-202ENST00000379018 SIGLEC8Q9NYZ4 499 aa13.43□□□□□ -0.26
PDLIM4-202ENST00000379018 A0A0A6YYD4 124 aa13.42□□□□□ -0.26
PDLIM4-202ENST00000379018 BMPR1BO00238 502 aa13.42□□□□□ -0.26
PDLIM4-202ENST00000379018 DENRO43583 198 aaKnown RBP13.42□□□□□ -0.26
PDLIM4-202ENST00000379018 EDN2P20800 178 aa13.42□□□□□ -0.26
PDLIM4-202ENST00000379018 MAPK3P27361 379 aaPredicted RBP13.42□□□□□ -0.26
PDLIM4-202ENST00000379018 UNC119Q13432 240 aa13.42□□□□□ -0.26
PDLIM4-202ENST00000379018 OR2K2Q8NGT1 345 aa13.42□□□□□ -0.26
PDLIM4-202ENST00000379018 KCNG3Q8TAE7 436 aa13.42□□□□□ -0.26
PDLIM4-202ENST00000379018 VCXQ9H320 206 aa13.42□□□□□ -0.26
PDLIM4-202ENST00000379018 MSGN1A6NI15 193 aa13.41□□□□□ -0.26
PDLIM4-202ENST00000379018 ZNF785A8K8V0 405 aa13.41□□□□□ -0.26
PDLIM4-202ENST00000379018 MYL12BO14950 172 aa13.41□□□□□ -0.26
PDLIM4-202ENST00000379018 SHOXO15266 292 aa13.41□□□□□ -0.26
PDLIM4-202ENST00000379018 RHOGP84095 191 aa13.41□□□□□ -0.26
PDLIM4-202ENST00000379018 ST3GAL4Q11206 333 aa13.41□□□□□ -0.26
PDLIM4-202ENST00000379018 TNXAQ16473 311 aa13.41□□□□□ -0.26
PDLIM4-202ENST00000379018 GLT8D1Q68CQ7 371 aa13.41□□□□□ -0.26
PDLIM4-202ENST00000379018 ZNF485Q8NCK3 441 aa13.41□□□□□ -0.26
PDLIM4-202ENST00000379018 CYGBQ8WWM9 190 aa13.41□□□□□ -0.26
PDLIM4-202ENST00000379018 WDR89Q96FK6 387 aaPredicted RBP13.41□□□□□ -0.26
PDLIM4-202ENST00000379018 TMEM68Q96MH6 324 aa13.41□□□□□ -0.26
PDLIM4-202ENST00000379018 ST6GALNAC5Q9BVH7 336 aa13.41□□□□□ -0.26
PDLIM4-202ENST00000379018 Q9H521 79 aa13.41□□□□□ -0.26
PDLIM4-202ENST00000379018 SMPD3Q9NY59 655 aaPredicted RBP13.41□□□□□ -0.26
PDLIM4-202ENST00000379018 RDH8Q9NYR8 311 aa13.41□□□□□ -0.26
PDLIM4-202ENST00000379018 SOCS1O15524 211 aa13.4□□□□□ -0.26
PDLIM4-202ENST00000379018 AIREO43918 545 aa13.4□□□□□ -0.26
PDLIM4-202ENST00000379018 MECP2P51608 486 aaKnown RBP13.4□□□□□ -0.26
PDLIM4-202ENST00000379018 CBX3Q13185 183 aa13.4□□□□□ -0.26
PDLIM4-202ENST00000379018 TM2D1Q9BX74 207 aa13.4□□□□□ -0.26
PDLIM4-202ENST00000379018 OR2D2Q9H210 308 aa13.4□□□□□ -0.26
PDLIM4-202ENST00000379018 RIMS4Q9H426 269 aaPredicted RBP13.4□□□□□ -0.26
PDLIM4-202ENST00000379018 AKIP1Q9NQ31 210 aa13.4□□□□□ -0.26
PDLIM4-202ENST00000379018 IGKV1-6A0A0C4DH72 117 aa13.39□□□□□ -0.27
PDLIM4-202ENST00000379018 A6NHS1 94 aa13.39□□□□□ -0.27
PDLIM4-202ENST00000379018 PPP5D1E7EU14 171 aa13.39□□□□□ -0.27
PDLIM4-202ENST00000379018 HLA-AP01891 365 aaKnown RBP13.39□□□□□ -0.27
PDLIM4-202ENST00000379018 CRYGBP07316 175 aa13.39□□□□□ -0.27
PDLIM4-202ENST00000379018 CD3GP09693 182 aa13.39□□□□□ -0.27
PDLIM4-202ENST00000379018 OR9G9P0C7N8 305 aa13.39□□□□□ -0.27
PDLIM4-202ENST00000379018 ATP5G2Q06055 141 aa13.39□□□□□ -0.27
PDLIM4-202ENST00000379018 P2RY14Q15391 338 aa13.39□□□□□ -0.27
PDLIM4-202ENST00000379018 IDO2Q6ZQW0 420 aa13.39□□□□□ -0.27
PDLIM4-202ENST00000379018 LRRTM1Q86UE6 522 aa13.39□□□□□ -0.27
PDLIM4-202ENST00000379018 LAX1Q8IWV1 398 aa13.39□□□□□ -0.27
PDLIM4-202ENST00000379018 ADAD2Q8NCV1 583 aaKnown RBP13.39□□□□□ -0.27
PDLIM4-202ENST00000379018 ACOT12Q8WYK0 555 aa13.39□□□□□ -0.27
PDLIM4-202ENST00000379018 DDB2Q92466 427 aa13.39□□□□□ -0.27
PDLIM4-202ENST00000379018 PTX4Q96A99 478 aa13.39□□□□□ -0.27
PDLIM4-202ENST00000379018 Q9N2K0 584 aa13.39□□□□□ -0.27
PDLIM4-202ENST00000379018 ZNF230Q9UIE0 474 aaPredicted RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms