RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 IGHV3-43DP0DP04 118 aa9.13□□□□□ -0.95
BEST1-201ENST00000378043 MSMO1Q15800 293 aa9.13□□□□□ -0.95
BEST1-201ENST00000378043 GFI1BQ5VTD9 330 aa9.13□□□□□ -0.95
BEST1-201ENST00000378043 C9orf106Q8NAJ2 232 aa9.13□□□□□ -0.95
BEST1-201ENST00000378043 RFESDQ8TAC1 157 aa9.13□□□□□ -0.95
BEST1-201ENST00000378043 FAM210BQ96KR6 192 aa9.13□□□□□ -0.95
BEST1-201ENST00000378043 DCTN5Q9BTE1 182 aa9.13□□□□□ -0.95
BEST1-201ENST00000378043 CXXC4Q9H2H0 198 aa9.13□□□□□ -0.95
BEST1-201ENST00000378043 SLC39A9Q9NUM3 307 aa9.13□□□□□ -0.95
BEST1-201ENST00000378043 CLDN34H7C241 214 aa9.12□□□□□ -0.95
BEST1-201ENST00000378043 PROP1O75360 226 aa9.12□□□□□ -0.95
BEST1-201ENST00000378043 IGHV2-70P01814 119 aa9.12□□□□□ -0.95
BEST1-201ENST00000378043 CECR9P0C854 216 aa9.12□□□□□ -0.95
BEST1-201ENST00000378043 FABP6P51161 128 aa9.12□□□□□ -0.95
BEST1-201ENST00000378043 COL10A1Q03692 680 aa9.12□□□□□ -0.95
BEST1-201ENST00000378043 FOXF2Q12947 444 aa9.12□□□□□ -0.95
BEST1-201ENST00000378043 PYY3Q5JQD4 70 aa9.12□□□□□ -0.95
BEST1-201ENST00000378043 FDCSPQ8NFU4 85 aa9.12□□□□□ -0.95
BEST1-201ENST00000378043 SLC25A22Q9H936 323 aa9.12□□□□□ -0.95
BEST1-201ENST00000378043 TET2Q6N021 2002 aaPredicted RBP9.12□□□□□ -0.95
BEST1-201ENST00000378043 TTC28Q96AY4 2481 aa9.12□□□□□ -0.95
BEST1-201ENST00000378043 DEFB108AA8MXU0 73 aa9.12□□□□□ -0.95
BEST1-201ENST00000378043 CLDN14O95500 239 aa9.12□□□□□ -0.95
BEST1-201ENST00000378043 MEF2BQ02080 365 aaPredicted RBP9.12□□□□□ -0.95
BEST1-201ENST00000378043 TFF3Q07654 80 aa9.12□□□□□ -0.95
BEST1-201ENST00000378043 CATR1Q13166 79 aa9.12□□□□□ -0.95
BEST1-201ENST00000378043 SPINK9Q5DT21 86 aa9.12□□□□□ -0.95
BEST1-201ENST00000378043 OR13D1Q8NGV5 346 aa9.12□□□□□ -0.95
BEST1-201ENST00000378043 DTD1Q8TEA8 209 aa9.12□□□□□ -0.95
BEST1-201ENST00000378043 FRZBQ92765 325 aa9.12□□□□□ -0.95
BEST1-201ENST00000378043 TMEM147Q9BVK8 224 aa9.12□□□□□ -0.95
BEST1-201ENST00000378043 MRPL37Q9BZE1 423 aaKnown RBP9.12□□□□□ -0.95
BEST1-201ENST00000378043 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.11□□□□□ -0.95
BEST1-201ENST00000378043 C15orf65H3BRN8 121 aa9.11□□□□□ -0.95
BEST1-201ENST00000378043 ST8SIA5O15466 376 aa9.11□□□□□ -0.95
BEST1-201ENST00000378043 SOD3P08294 240 aa9.11□□□□□ -0.95
BEST1-201ENST00000378043 DEFA4P12838 97 aa9.11□□□□□ -0.95
BEST1-201ENST00000378043 KITLGP21583 273 aa9.11□□□□□ -0.95
BEST1-201ENST00000378043 MDKP21741 143 aaPredicted RBP9.11□□□□□ -0.95
BEST1-201ENST00000378043 CCL11P51671 97 aa9.11□□□□□ -0.95
BEST1-201ENST00000378043 CDPF1Q6NVV7 123 aa9.11□□□□□ -0.95
BEST1-201ENST00000378043 CD177Q8N6Q3 437 aa9.11□□□□□ -0.95
BEST1-201ENST00000378043 GATAD1Q8WUU5 269 aa9.11□□□□□ -0.95
BEST1-201ENST00000378043 NINJ1Q92982 152 aa9.11□□□□□ -0.95
BEST1-201ENST00000378043 MGAQ8IWI9 3026 aa9.11□□□□□ -0.95
BEST1-201ENST00000378043 RAB29O14966 203 aa9.11□□□□□ -0.95
BEST1-201ENST00000378043 TIMM8AO60220 97 aaPredicted RBP9.11□□□□□ -0.95
BEST1-201ENST00000378043 TRGC1P0CF51 173 aa9.11□□□□□ -0.95
BEST1-201ENST00000378043 S100PP25815 95 aa9.11□□□□□ -0.95
BEST1-201ENST00000378043 VWC2Q2TAL6 325 aa9.11□□□□□ -0.95
BEST1-201ENST00000378043 C1orf87Q8N0U7 546 aa9.11□□□□□ -0.95
BEST1-201ENST00000378043 Q8N7P7 452 aa9.11□□□□□ -0.95
BEST1-201ENST00000378043 LURAP1Q96LR2 239 aa9.11□□□□□ -0.95
BEST1-201ENST00000378043 PSG11Q9UQ72 335 aa9.11□□□□□ -0.95
BEST1-201ENST00000378043 TRBV24-1A0A075B6N3 115 aa9.11□□□□□ -0.95
BEST1-201ENST00000378043 IFNL4K9M1U5 179 aa9.11□□□□□ -0.95
BEST1-201ENST00000378043 IFNA1P01562 189 aa9.11□□□□□ -0.95
BEST1-201ENST00000378043 WT1P19544 449 aaPredicted RBP9.11□□□□□ -0.95
BEST1-201ENST00000378043 FGF7P21781 194 aa9.11□□□□□ -0.95
BEST1-201ENST00000378043 ATP6V1FQ16864 119 aa9.11□□□□□ -0.95
BEST1-201ENST00000378043 Q3ZCU0 254 aa9.11□□□□□ -0.95
BEST1-201ENST00000378043 H2BFWTQ7Z2G1 175 aa9.11□□□□□ -0.95
BEST1-201ENST00000378043 OR10P1Q8NGE3 313 aa9.11□□□□□ -0.95
BEST1-201ENST00000378043 OR10G9Q8NGN4 311 aa9.11□□□□□ -0.95
BEST1-201ENST00000378043 OR10G7Q8NGN6 311 aa9.11□□□□□ -0.95
BEST1-201ENST00000378043 SMIM7Q9BQ49 75 aa9.11□□□□□ -0.95
BEST1-201ENST00000378043 NPCDR1Q9BY65 106 aa9.11□□□□□ -0.95
BEST1-201ENST00000378043 GAR1Q9NY12 217 aaKnown RBP9.11□□□□□ -0.95
BEST1-201ENST00000378043 ICE1Q9Y2F5 2266 aa9.1□□□□□ -0.95
BEST1-201ENST00000378043 CTXND1A0A1B0GTU2 59 aa9.1□□□□□ -0.95
BEST1-201ENST00000378043 MARCH11A6NNE9 402 aa9.1□□□□□ -0.95
BEST1-201ENST00000378043 IGLV1-44P01699 117 aa9.1□□□□□ -0.95
BEST1-201ENST00000378043 NCR3LG1Q68D85 454 aa9.1□□□□□ -0.95
BEST1-201ENST00000378043 CYP2G1PQ6ZSU1 146 aa9.1□□□□□ -0.95
BEST1-201ENST00000378043 GPR61Q9BZJ8 451 aa9.1□□□□□ -0.95
BEST1-201ENST00000378043 DSCAMO60469 2012 aa9.1□□□□□ -0.95
BEST1-201ENST00000378043 A0A1B0GWJ7 208 aa9.1□□□□□ -0.95
BEST1-201ENST00000378043 ZNF891A8MT65 544 aaPredicted RBP9.1□□□□□ -0.95
BEST1-201ENST00000378043 EGR1P18146 543 aa9.1□□□□□ -0.95
BEST1-201ENST00000378043 TRIP6Q15654 476 aaKnown RBP9.1□□□□□ -0.95
BEST1-201ENST00000378043 MSMPQ1L6U9 139 aa9.1□□□□□ -0.95
BEST1-201ENST00000378043 SMIM21Q3B7S5 101 aa9.1□□□□□ -0.95
BEST1-201ENST00000378043 FFAR4Q5NUL3 377 aa9.1□□□□□ -0.95
BEST1-201ENST00000378043 ZNF66Q6ZN08 573 aa9.1□□□□□ -0.95
BEST1-201ENST00000378043 HIST3H2BBQ8N257 126 aa9.1□□□□□ -0.95
BEST1-201ENST00000378043 TCTEX1D1Q8N7M0 179 aa9.1□□□□□ -0.95
BEST1-201ENST00000378043 C1orf162Q8NEQ5 155 aaPredicted RBP9.1□□□□□ -0.95
BEST1-201ENST00000378043 RAB24Q969Q5 203 aa9.1□□□□□ -0.95
BEST1-201ENST00000378043 NAT8Q9UHE5 227 aa9.1□□□□□ -0.95
BEST1-201ENST00000378043 CNOT1A5YKK6 2376 aaKnown RBP9.1□□□□□ -0.95
BEST1-201ENST00000378043 DSCAML1Q8TD84 2053 aa9.09□□□□□ -0.95
BEST1-201ENST00000378043 DMXL2Q8TDJ6 3036 aa9.09□□□□□ -0.95
BEST1-201ENST00000378043 TRAV20A0A0B4J274 112 aa9.09□□□□□ -0.95
BEST1-201ENST00000378043 IGHV2OR16-5A0A0B4J2B6 119 aa9.09□□□□□ -0.95
BEST1-201ENST00000378043 IGHV1-18A0A0C4DH31 117 aa9.09□□□□□ -0.95
BEST1-201ENST00000378043 C15orf62A8K5M9 175 aa9.09□□□□□ -0.95
BEST1-201ENST00000378043 SEC14L6B5MCN3 397 aa9.09□□□□□ -0.95
BEST1-201ENST00000378043 KBTBD11O94819 623 aa9.09□□□□□ -0.95
BEST1-201ENST00000378043 PFN1P07737 140 aaKnown RBP9.09□□□□□ -0.95
BEST1-201ENST00000378043 OR9G9P0C7N8 305 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms