RNA–Protein interactions for RNA: ENST00000377942.7

PCDH8-202, Transcript of protocadherin 8, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH8, Length 5,088 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-202ENST00000377942 PAGE4O60829 102 aa16.77■□□□□ 0.27
PCDH8-202ENST00000377942 NHLH2Q02577 135 aa16.77■□□□□ 0.27
PCDH8-202ENST00000377942 BSPH1Q075Z2 132 aa16.77■□□□□ 0.27
PCDH8-202ENST00000377942 PSG7Q13046 419 aa16.77■□□□□ 0.27
PCDH8-202ENST00000377942 GAMTQ14353 236 aa16.77■□□□□ 0.27
PCDH8-202ENST00000377942 WDR31Q8NA23 367 aa16.77■□□□□ 0.27
PCDH8-202ENST00000377942 OR4A5Q8NH83 315 aa16.77■□□□□ 0.27
PCDH8-202ENST00000377942 SEC11CQ9BY50 192 aa16.77■□□□□ 0.27
PCDH8-202ENST00000377942 PGA5P0DJD9 388 aa16.76■□□□□ 0.27
PCDH8-202ENST00000377942 RNF212Q495C1 297 aa16.76■□□□□ 0.27
PCDH8-202ENST00000377942 RBKSQ9H477 322 aa16.76■□□□□ 0.27
PCDH8-202ENST00000377942 C5orf66Q9H5L9 145 aa16.76■□□□□ 0.27
PCDH8-202ENST00000377942 NAGKQ9UJ70 344 aa16.76■□□□□ 0.27
PCDH8-202ENST00000377942 NEUROG3Q9Y4Z2 214 aa16.76■□□□□ 0.27
PCDH8-202ENST00000377942 A0A1B0GTI1 187 aa16.76■□□□□ 0.27
PCDH8-202ENST00000377942 F5H697 171 aa16.76■□□□□ 0.27
PCDH8-202ENST00000377942 TXNDC17Q9BRA2 123 aa16.76■□□□□ 0.27
PCDH8-202ENST00000377942 CLEC5AQ9NY25 188 aa16.76■□□□□ 0.27
PCDH8-202ENST00000377942 HELTA6NFD8 242 aa16.76■□□□□ 0.27
PCDH8-202ENST00000377942 MELTFP08582 738 aa16.76■□□□□ 0.27
PCDH8-202ENST00000377942 LOXL3P58215 753 aa16.76■□□□□ 0.27
PCDH8-202ENST00000377942 TMEM37Q8WXS4 190 aa16.76■□□□□ 0.27
PCDH8-202ENST00000377942 TMPRSS5Q9H3S3 457 aa16.76■□□□□ 0.27
PCDH8-202ENST00000377942 GOLT1BQ9Y3E0 138 aa16.76■□□□□ 0.27
PCDH8-202ENST00000377942 FCN1O00602 326 aa16.76■□□□□ 0.27
PCDH8-202ENST00000377942 OR10J1P30954 320 aa16.76■□□□□ 0.27
PCDH8-202ENST00000377942 MARCH11A6NNE9 402 aa16.75■□□□□ 0.27
PCDH8-202ENST00000377942 ZNF837Q96EG3 531 aaPredicted RBP16.75■□□□□ 0.27
PCDH8-202ENST00000377942 TUBD1Q9UJT1 453 aa16.75■□□□□ 0.27
PCDH8-202ENST00000377942 E9PLN8 166 aa16.75■□□□□ 0.27
PCDH8-202ENST00000377942 SLC25A17O43808 307 aa16.75■□□□□ 0.27
PCDH8-202ENST00000377942 MMP7P09237 267 aaPredicted RBP16.75■□□□□ 0.27
PCDH8-202ENST00000377942 RPL30P62888 115 aaKnown RBP16.75■□□□□ 0.27
PCDH8-202ENST00000377942 VKORC1Q9BQB6 163 aa16.75■□□□□ 0.27
PCDH8-202ENST00000377942 PAXXQ9BUH6 204 aa16.75■□□□□ 0.27
PCDH8-202ENST00000377942 PXMP4Q9Y6I8 212 aa16.75■□□□□ 0.27
PCDH8-202ENST00000377942 P01737 135 aa16.75■□□□□ 0.27
PCDH8-202ENST00000377942 OR2T10Q8NGZ9 312 aa16.75■□□□□ 0.27
PCDH8-202ENST00000377942 IGKV3D-15A0A087WSY6 115 aa16.75■□□□□ 0.27
PCDH8-202ENST00000377942 KBTBD11O94819 623 aa16.75■□□□□ 0.27
PCDH8-202ENST00000377942 UNQ5815/PRO19632Q6UWF5 114 aa16.75■□□□□ 0.27
PCDH8-202ENST00000377942 OR5AC2Q9NZP5 309 aa16.75■□□□□ 0.27
PCDH8-202ENST00000377942 A0A1W2PS18 150 aa16.74■□□□□ 0.27
PCDH8-202ENST00000377942 CFDP00746 253 aaPredicted RBP16.74■□□□□ 0.27
PCDH8-202ENST00000377942 COL8A1P27658 744 aa16.74■□□□□ 0.27
PCDH8-202ENST00000377942 RTN4RQ9BZR6 473 aa16.74■□□□□ 0.27
PCDH8-202ENST00000377942 SIRT7Q9NRC8 400 aa16.74■□□□□ 0.27
PCDH8-202ENST00000377942 TRAV30A0A087WSZ9 112 aa16.74■□□□□ 0.27
PCDH8-202ENST00000377942 UNC119Q13432 240 aa16.74■□□□□ 0.27
PCDH8-202ENST00000377942 OR2T8A6NH00 312 aa16.74■□□□□ 0.27
PCDH8-202ENST00000377942 MEF2CQ06413 473 aaPredicted RBP16.74■□□□□ 0.27
PCDH8-202ENST00000377942 RABAC1Q9UI14 185 aa16.74■□□□□ 0.27
PCDH8-202ENST00000377942 DRAM1Q8N682 238 aa16.74■□□□□ 0.27
PCDH8-202ENST00000377942 KLHDC1Q8N7A1 406 aa16.74■□□□□ 0.27
PCDH8-202ENST00000377942 MRPL30Q8TCC3 161 aaKnown RBP16.74■□□□□ 0.27
PCDH8-202ENST00000377942 QTRT1Q9BXR0 403 aaKnown RBP16.74■□□□□ 0.27
PCDH8-202ENST00000377942 LYRM2Q9NU23 88 aaPredicted RBP16.74■□□□□ 0.27
PCDH8-202ENST00000377942 LOC102723971A0A1B0GUV8 181 aa16.73■□□□□ 0.27
PCDH8-202ENST00000377942 PF4V1P10720 104 aa16.73■□□□□ 0.27
PCDH8-202ENST00000377942 CXorf66Q5JRM2 361 aaPredicted RBP16.73■□□□□ 0.27
PCDH8-202ENST00000377942 ZNRF1Q8ND25 227 aa16.73■□□□□ 0.27
PCDH8-202ENST00000377942 SULT1A2P50226 295 aa16.73■□□□□ 0.27
PCDH8-202ENST00000377942 TNFRSF9Q07011 255 aa16.73■□□□□ 0.27
PCDH8-202ENST00000377942 ZNF362Q5T0B9 420 aaPredicted RBP16.73■□□□□ 0.27
PCDH8-202ENST00000377942 FAM24BQ8N5W8 94 aa16.73■□□□□ 0.27
PCDH8-202ENST00000377942 C5orf17Q8NAS9 161 aa16.73■□□□□ 0.27
PCDH8-202ENST00000377942 ZNF430Q9H8G1 570 aaPredicted RBP16.73■□□□□ 0.27
PCDH8-202ENST00000377942 C17orf100A8MU93 164 aa16.73■□□□□ 0.27
PCDH8-202ENST00000377942 WNT9BO14905 357 aa16.73■□□□□ 0.27
PCDH8-202ENST00000377942 ERVS71-1P61550 626 aa16.73■□□□□ 0.27
PCDH8-202ENST00000377942 C1QL2Q7Z5L3 287 aa16.73■□□□□ 0.27
PCDH8-202ENST00000377942 PNKDQ8N490 385 aa16.73■□□□□ 0.27
PCDH8-202ENST00000377942 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.73■□□□□ 0.27
PCDH8-202ENST00000377942 CHODLQ9H9P2 273 aa16.73■□□□□ 0.27
PCDH8-202ENST00000377942 LINC00862A6NCI5 91 aa16.73■□□□□ 0.27
PCDH8-202ENST00000377942 SRSF10O75494 262 aaKnown RBP16.73■□□□□ 0.27
PCDH8-202ENST00000377942 RIGQ13278 110 aa16.73■□□□□ 0.27
PCDH8-202ENST00000377942 PRSS3P2Q8NHM4 247 aa16.73■□□□□ 0.27
PCDH8-202ENST00000377942 ELF5Q9UKW6 265 aaPredicted RBP16.73■□□□□ 0.27
PCDH8-202ENST00000377942 PLXNA3P51805 1871 aa16.73■□□□□ 0.27
PCDH8-202ENST00000377942 MFAP4P55083 255 aa16.72■□□□□ 0.27
PCDH8-202ENST00000377942 ZNF818PQ6ZRF7 136 aa16.72■□□□□ 0.27
PCDH8-202ENST00000377942 STPG3Q8N7X2 389 aa16.72■□□□□ 0.27
PCDH8-202ENST00000377942 IGHV3-21A0A0B4J1V1 117 aa16.72■□□□□ 0.27
PCDH8-202ENST00000377942 IGFBP3P17936 291 aaPredicted RBP16.72■□□□□ 0.27
PCDH8-202ENST00000377942 SUMO1P63165 101 aaKnown RBP16.72■□□□□ 0.27
PCDH8-202ENST00000377942 TMEM187Q14656 261 aa16.72■□□□□ 0.27
PCDH8-202ENST00000377942 C19orf35Q6ZS72 473 aa16.72■□□□□ 0.27
PCDH8-202ENST00000377942 AQP10Q96PS8 301 aa16.72■□□□□ 0.27
PCDH8-202ENST00000377942 A0A0G2JK05 382 aa16.72■□□□□ 0.27
PCDH8-202ENST00000377942 SHISA3A0PJX4 238 aa16.72■□□□□ 0.27
PCDH8-202ENST00000377942 FAM74A7A6NL05 159 aa16.72■□□□□ 0.27
PCDH8-202ENST00000377942 ARL2-SNX15V9GYD0 113 aa16.72■□□□□ 0.27
PCDH8-202ENST00000377942 SPINK4O60575 86 aa16.71■□□□□ 0.27
PCDH8-202ENST00000377942 OR2J3O76001 311 aa16.71■□□□□ 0.27
PCDH8-202ENST00000377942 SSTR5P35346 364 aa16.71■□□□□ 0.27
PCDH8-202ENST00000377942 RPS11P62280 158 aaKnown RBP eCLIP16.71■□□□□ 0.27
PCDH8-202ENST00000377942 AWAT1Q58HT5 328 aa16.71■□□□□ 0.27
PCDH8-202ENST00000377942 TCF19Q9Y242 345 aa16.71■□□□□ 0.27
PCDH8-202ENST00000377942 PINLYPA6NC86 204 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms