RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 RNF144BQ7Z419 303 aa13.2□□□□□ -0.3
FXN-201ENST00000377270 RPS19BP1Q86WX3 136 aaKnown RBP13.2□□□□□ -0.3
FXN-201ENST00000377270 PROK2Q9HC23 129 aa13.2□□□□□ -0.3
FXN-201ENST00000377270 PNRC2Q9NPJ4 139 aaKnown RBP13.2□□□□□ -0.3
FXN-201ENST00000377270 SIVA1O15304 175 aa13.19□□□□□ -0.3
FXN-201ENST00000377270 LIFP15018 202 aa13.19□□□□□ -0.3
FXN-201ENST00000377270 PLP1P60201 277 aa13.19□□□□□ -0.3
FXN-201ENST00000377270 MPV17L2Q567V2 206 aa13.19□□□□□ -0.3
FXN-201ENST00000377270 FAM57BQ71RH2 274 aa13.19□□□□□ -0.3
FXN-201ENST00000377270 TMEM45BQ96B21 275 aa13.19□□□□□ -0.3
FXN-201ENST00000377270 C1orf147Q96MC9 270 aaPredicted RBP13.19□□□□□ -0.3
FXN-201ENST00000377270 WNT10AQ9GZT5 417 aa13.19□□□□□ -0.3
FXN-201ENST00000377270 PRSS50Q9UI38 385 aa13.19□□□□□ -0.3
FXN-201ENST00000377270 A0A0U1RQK1 487 aa13.19□□□□□ -0.3
FXN-201ENST00000377270 ZIC3O60481 467 aa13.19□□□□□ -0.3
FXN-201ENST00000377270 GUCA1AP43080 201 aaPredicted RBP13.19□□□□□ -0.3
FXN-201ENST00000377270 DSCR4P56555 118 aaPredicted RBP13.19□□□□□ -0.3
FXN-201ENST00000377270 EWSR1Q01844 656 aaKnown RBP eCLIP13.19□□□□□ -0.3
FXN-201ENST00000377270 C9orf135Q5VTT2 229 aa13.19□□□□□ -0.3
FXN-201ENST00000377270 NEGR1Q7Z3B1 354 aa13.19□□□□□ -0.3
FXN-201ENST00000377270 DEFB125Q8N687 156 aa13.19□□□□□ -0.3
FXN-201ENST00000377270 PXMP4Q9Y6I8 212 aa13.19□□□□□ -0.3
FXN-201ENST00000377270 A0A1W2PP11 408 aa13.18□□□□□ -0.3
FXN-201ENST00000377270 OR6C6A6NF89 314 aa13.18□□□□□ -0.3
FXN-201ENST00000377270 GAGE10A6NGK3 116 aa13.18□□□□□ -0.3
FXN-201ENST00000377270 ZFP92A6NM28 416 aa13.18□□□□□ -0.3
FXN-201ENST00000377270 ST8SIA3O43173 380 aa13.18□□□□□ -0.3
FXN-201ENST00000377270 GATA3P23771 443 aa13.18□□□□□ -0.3
FXN-201ENST00000377270 FOLR3P41439 243 aa13.18□□□□□ -0.3
FXN-201ENST00000377270 PEAR1Q5VY43 1037 aaPredicted RBP13.18□□□□□ -0.3
FXN-201ENST00000377270 FBXL14Q8N1E6 418 aa13.18□□□□□ -0.3
FXN-201ENST00000377270 OR2AE1Q8NHA4 323 aa13.18□□□□□ -0.3
FXN-201ENST00000377270 MRAP2Q96G30 205 aa13.18□□□□□ -0.3
FXN-201ENST00000377270 EAF1Q96JC9 268 aaPredicted RBP13.18□□□□□ -0.3
FXN-201ENST00000377270 UCN2Q96RP3 112 aa13.18□□□□□ -0.3
FXN-201ENST00000377270 OR51I2Q9H344 312 aa13.18□□□□□ -0.3
FXN-201ENST00000377270 ZDBF2Q9HCK1 2354 aa13.18□□□□□ -0.3
FXN-201ENST00000377270 ADMP35318 185 aa13.18□□□□□ -0.3
FXN-201ENST00000377270 ATOH7Q8N100 152 aa13.18□□□□□ -0.3
FXN-201ENST00000377270 SPXQ9BT56 116 aa13.18□□□□□ -0.3
FXN-201ENST00000377270 PLA2G3Q9NZ20 509 aa13.18□□□□□ -0.3
FXN-201ENST00000377270 OR3A4PP47883 348 aa13.17□□□□□ -0.3
FXN-201ENST00000377270 ZNF788Q6ZQV5 615 aa13.17□□□□□ -0.3
FXN-201ENST00000377270 CENPVQ7Z7K6 275 aaPredicted RBP13.17□□□□□ -0.3
FXN-201ENST00000377270 NPVFQ9HCQ7 196 aa13.17□□□□□ -0.3
FXN-201ENST00000377270 NPIPA3F8WFD2 350 aa13.17□□□□□ -0.3
FXN-201ENST00000377270 H0Y8G0 127 aa13.17□□□□□ -0.3
FXN-201ENST00000377270 ZNF17P17021 662 aa13.17□□□□□ -0.3
FXN-201ENST00000377270 IL3RAP26951 378 aa13.17□□□□□ -0.3
FXN-201ENST00000377270 LPAL2Q16609 132 aa13.17□□□□□ -0.3
FXN-201ENST00000377270 SP6Q3SY56 376 aa13.17□□□□□ -0.3
FXN-201ENST00000377270 LYZL2Q7Z4W2 148 aa13.17□□□□□ -0.3
FXN-201ENST00000377270 OR5AS1Q8N127 324 aa13.17□□□□□ -0.3
FXN-201ENST00000377270 WDYHV1Q96HA8 205 aa13.17□□□□□ -0.3
FXN-201ENST00000377270 WASHC3Q9Y3C0 194 aa13.17□□□□□ -0.3
FXN-201ENST00000377270 WDFY4Q6ZS81 3184 aa13.17□□□□□ -0.3
FXN-201ENST00000377270 PDE6DO43924 150 aa13.16□□□□□ -0.3
FXN-201ENST00000377270 HBE1P02100 147 aa13.16□□□□□ -0.3
FXN-201ENST00000377270 GRB2P62993 217 aaKnown RBP13.16□□□□□ -0.3
FXN-201ENST00000377270 TMEM187Q14656 261 aa13.16□□□□□ -0.3
FXN-201ENST00000377270 LTC4SQ16873 150 aa13.16□□□□□ -0.3
FXN-201ENST00000377270 DMRTC1Q5HYR2 192 aa13.16□□□□□ -0.3
FXN-201ENST00000377270 C1orf210Q8IVY1 113 aa13.16□□□□□ -0.3
FXN-201ENST00000377270 SIGLECL1Q8N7X8 197 aa13.16□□□□□ -0.3
FXN-201ENST00000377270 OR10A2Q9H208 303 aa13.16□□□□□ -0.3
FXN-201ENST00000377270 PSG8Q9UQ74 426 aa13.16□□□□□ -0.3
FXN-201ENST00000377270 RTTNQ86VV8 2226 aa13.16□□□□□ -0.3
FXN-201ENST00000377270 C5orf63A6NC05 138 aa13.16□□□□□ -0.3
FXN-201ENST00000377270 E9PLN8 166 aa13.16□□□□□ -0.3
FXN-201ENST00000377270 CCDC71LQ8N9Z2 235 aa13.16□□□□□ -0.3
FXN-201ENST00000377270 RBM24Q9BX46 236 aaKnown RBP13.16□□□□□ -0.3
FXN-201ENST00000377270 SH2D2AQ9NP31 389 aa13.16□□□□□ -0.3
FXN-201ENST00000377270 CISD1Q9NZ45 108 aaKnown RBP13.16□□□□□ -0.3
FXN-201ENST00000377270 F5H5K5 113 aa13.15□□□□□ -0.3
FXN-201ENST00000377270 TNFSF11O14788 317 aa13.15□□□□□ -0.3
FXN-201ENST00000377270 PITX3O75364 302 aa13.15□□□□□ -0.3
FXN-201ENST00000377270 PIGPP57054 158 aa13.15□□□□□ -0.3
FXN-201ENST00000377270 RPS18P62269 152 aaKnown RBP13.15□□□□□ -0.3
FXN-201ENST00000377270 DOK3Q7L591 496 aa13.15□□□□□ -0.3
FXN-201ENST00000377270 OR2C3Q8N628 320 aa13.15□□□□□ -0.3
FXN-201ENST00000377270 FER1L6-AS2Q96M78 137 aa13.15□□□□□ -0.3
FXN-201ENST00000377270 GPER1Q99527 375 aa13.15□□□□□ -0.3
FXN-201ENST00000377270 CHRDL1Q9BU40 450 aa13.15□□□□□ -0.3
FXN-201ENST00000377270 NCOA6Q14686 2063 aaPredicted RBP13.15□□□□□ -0.3
FXN-201ENST00000377270 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.15□□□□□ -0.3
FXN-201ENST00000377270 MUC21A0A0G2JKD1 596 aa13.15□□□□□ -0.3
FXN-201ENST00000377270 A0A0J9YW62 118 aa13.15□□□□□ -0.3
FXN-201ENST00000377270 MUC21A0A140T8X8 626 aa13.15□□□□□ -0.3
FXN-201ENST00000377270 OR11H12B2RN74 326 aa13.15□□□□□ -0.3
FXN-201ENST00000377270 OTX2P32243 289 aa13.15□□□□□ -0.3
FXN-201ENST00000377270 ZXDAP98168 799 aa13.15□□□□□ -0.3
FXN-201ENST00000377270 HSD52Q0P140 79 aa13.15□□□□□ -0.3
FXN-201ENST00000377270 ZNF154Q13106 437 aa13.15□□□□□ -0.3
FXN-201ENST00000377270 MUC21Q5SSG8 566 aa13.15□□□□□ -0.3
FXN-201ENST00000377270 GJC3Q8NFK1 279 aa13.15□□□□□ -0.3
FXN-201ENST00000377270 OR11H1Q8NG94 326 aa13.15□□□□□ -0.3
FXN-201ENST00000377270 OR51T1Q8NGJ9 327 aa13.15□□□□□ -0.3
FXN-201ENST00000377270 OR11H2Q8NH07 326 aa13.15□□□□□ -0.3
FXN-201ENST00000377270 TMEM54Q969K7 222 aa13.15□□□□□ -0.3
FXN-201ENST00000377270 SMIM7Q9BQ49 75 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 154.5 ms