RNA–Protein interactions for RNA: ENST00000376724.6

TRIM40-206, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRIM40, Length 2,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-206ENST00000376724 HSD17B10Q99714 261 aaKnown RBP10.66□□□□□ -0.7
TRIM40-206ENST00000376724 ABHD14AQ9BUJ0 271 aa10.66□□□□□ -0.7
TRIM40-206ENST00000376724 IFI27L2Q9H2X8 130 aa10.66□□□□□ -0.7
TRIM40-206ENST00000376724 FBXL17Q9UF56 701 aa10.66□□□□□ -0.7
TRIM40-206ENST00000376724 LINC00312Q9Y6C7 94 aa10.66□□□□□ -0.7
TRIM40-206ENST00000376724 DSCAML1Q8TD84 2053 aa10.66□□□□□ -0.7
TRIM40-206ENST00000376724 YLPM1P49750 1951 aaKnown RBP10.66□□□□□ -0.7
TRIM40-206ENST00000376724 FAM24AA6NFZ4 105 aa10.65□□□□□ -0.7
TRIM40-206ENST00000376724 C19orf84I3L1E1 186 aa10.65□□□□□ -0.7
TRIM40-206ENST00000376724 CHST1O43916 411 aa10.65□□□□□ -0.7
TRIM40-206ENST00000376724 GPR137BO60478 399 aa10.65□□□□□ -0.7
TRIM40-206ENST00000376724 SOD3P08294 240 aa10.65□□□□□ -0.7
TRIM40-206ENST00000376724 PPOXP50336 477 aa10.65□□□□□ -0.7
TRIM40-206ENST00000376724 NHLH2Q02577 135 aa10.65□□□□□ -0.7
TRIM40-206ENST00000376724 MSMO1Q15800 293 aa10.65□□□□□ -0.7
TRIM40-206ENST00000376724 NCR3LG1Q68D85 454 aa10.65□□□□□ -0.7
TRIM40-206ENST00000376724 TMEM200BQ69YZ2 307 aa10.65□□□□□ -0.7
TRIM40-206ENST00000376724 BAP18Q8IXM2 172 aa10.65□□□□□ -0.7
TRIM40-206ENST00000376724 CORO2AQ92828 525 aa10.65□□□□□ -0.7
TRIM40-206ENST00000376724 CBLN4Q9NTU7 201 aa10.65□□□□□ -0.7
TRIM40-206ENST00000376724 LRBAP50851 2863 aa10.65□□□□□ -0.7
TRIM40-206ENST00000376724 TEX46H3BTG2 121 aa10.65□□□□□ -0.71
TRIM40-206ENST00000376724 TAAR5O14804 337 aa10.65□□□□□ -0.71
TRIM40-206ENST00000376724 PITX3O75364 302 aa10.65□□□□□ -0.71
TRIM40-206ENST00000376724 DUTP33316 252 aaKnown RBP10.65□□□□□ -0.71
TRIM40-206ENST00000376724 AVPI1Q5T686 147 aa10.65□□□□□ -0.71
TRIM40-206ENST00000376724 C1orf229Q6ZS94 237 aaPredicted RBP10.65□□□□□ -0.71
TRIM40-206ENST00000376724 STOML3Q8TAV4 291 aa10.65□□□□□ -0.71
TRIM40-206ENST00000376724 C12orf57Q99622 126 aa10.65□□□□□ -0.71
TRIM40-206ENST00000376724 RAB1BQ9H0U4 201 aa10.65□□□□□ -0.71
TRIM40-206ENST00000376724 GAL3ST2Q9H3Q3 398 aa10.65□□□□□ -0.71
TRIM40-206ENST00000376724 SPTBN1Q01082 2364 aaKnown RBP10.64□□□□□ -0.71
TRIM40-206ENST00000376724 A0A1W2PPR1 153 aa10.64□□□□□ -0.71
TRIM40-206ENST00000376724 FCGR3BO75015 233 aa10.64□□□□□ -0.71
TRIM40-206ENST00000376724 SLC25A6P12236 298 aa10.64□□□□□ -0.71
TRIM40-206ENST00000376724 RAB7AP51149 207 aa10.64□□□□□ -0.71
TRIM40-206ENST00000376724 MEF2CQ06413 473 aaPredicted RBP10.64□□□□□ -0.71
TRIM40-206ENST00000376724 GPR157Q5UAW9 335 aa10.64□□□□□ -0.71
TRIM40-206ENST00000376724 LYG1Q8N1E2 194 aa10.64□□□□□ -0.71
TRIM40-206ENST00000376724 OR2C3Q8N628 320 aa10.64□□□□□ -0.71
TRIM40-206ENST00000376724 TMED6Q8WW62 240 aa10.64□□□□□ -0.71
TRIM40-206ENST00000376724 PHYHIPLQ96FC7 376 aa10.64□□□□□ -0.71
TRIM40-206ENST00000376724 ZNF714Q96N38 554 aa10.64□□□□□ -0.71
TRIM40-206ENST00000376724 ZNRD1Q9P1U0 126 aa10.64□□□□□ -0.71
TRIM40-206ENST00000376724 LAMP3Q9UQV4 416 aa10.64□□□□□ -0.71
TRIM40-206ENST00000376724 SAA2-SAA4A0A096LPE2 208 aa10.63□□□□□ -0.71
TRIM40-206ENST00000376724 F8W036 122 aa10.63□□□□□ -0.71
TRIM40-206ENST00000376724 TMEM50AO95807 157 aa10.63□□□□□ -0.71
TRIM40-206ENST00000376724 SAA2P0DJI9 122 aaPredicted RBP10.63□□□□□ -0.71
TRIM40-206ENST00000376724 AGAP20933 346 aa10.63□□□□□ -0.71
TRIM40-206ENST00000376724 ATRAIDQ6UW56 229 aa10.63□□□□□ -0.71
TRIM40-206ENST00000376724 PDZD9Q8IXQ8 264 aa10.63□□□□□ -0.71
TRIM40-206ENST00000376724 C11orf1Q9H5F2 150 aa10.63□□□□□ -0.71
TRIM40-206ENST00000376724 TAS2R3Q9NYW6 316 aa10.63□□□□□ -0.71
TRIM40-206ENST00000376724 RPUSD1Q9UJJ7 312 aaKnown RBP10.63□□□□□ -0.71
TRIM40-206ENST00000376724 MMP24Q9Y5R2 645 aa10.63□□□□□ -0.71
TRIM40-206ENST00000376724 IGSF23A1L1A6 192 aa10.63□□□□□ -0.71
TRIM40-206ENST00000376724 H3BP45 60 aa10.63□□□□□ -0.71
TRIM40-206ENST00000376724 IAPPP10997 89 aa10.63□□□□□ -0.71
TRIM40-206ENST00000376724 RPL35P42766 123 aaKnown RBP10.63□□□□□ -0.71
TRIM40-206ENST00000376724 EWSR1Q01844 656 aaKnown RBP eCLIP10.63□□□□□ -0.71
TRIM40-206ENST00000376724 SLC25A32Q9H2D1 315 aa10.63□□□□□ -0.71
TRIM40-206ENST00000376724 LINC00574Q9H8X3 128 aa10.63□□□□□ -0.71
TRIM40-206ENST00000376724 KAAG1Q9UBP8 84 aa10.63□□□□□ -0.71
TRIM40-206ENST00000376724 CACNA1BQ00975 2339 aa10.63□□□□□ -0.71
TRIM40-206ENST00000376724 USF3Q68DE3 2245 aa10.63□□□□□ -0.71
TRIM40-206ENST00000376724 KIAA1324LA8MWY0 1029 aaPredicted RBP10.62□□□□□ -0.71
TRIM40-206ENST00000376724 RAB29O14966 203 aa10.62□□□□□ -0.71
TRIM40-206ENST00000376724 PRB1P04280 392 aa10.62□□□□□ -0.71
TRIM40-206ENST00000376724 MRPS11P82912 194 aaKnown RBP10.62□□□□□ -0.71
TRIM40-206ENST00000376724 C11orf71Q6IPW1 123 aa10.62□□□□□ -0.71
TRIM40-206ENST00000376724 H2BFWTQ7Z2G1 175 aa10.62□□□□□ -0.71
TRIM40-206ENST00000376724 TCTEX1D1Q8N7M0 179 aa10.62□□□□□ -0.71
TRIM40-206ENST00000376724 ZNF439Q8NDP4 499 aa10.62□□□□□ -0.71
TRIM40-206ENST00000376724 FAM216AQ8WUB2 273 aa10.62□□□□□ -0.71
TRIM40-206ENST00000376724 RBMXL1Q96E39 390 aaKnown RBP10.62□□□□□ -0.71
TRIM40-206ENST00000376724 UBTD1Q9HAC8 227 aa10.62□□□□□ -0.71
TRIM40-206ENST00000376724 WFDC1Q9HC57 220 aa10.62□□□□□ -0.71
TRIM40-206ENST00000376724 LYRM2Q9NU23 88 aaPredicted RBP10.62□□□□□ -0.71
TRIM40-206ENST00000376724 COA4Q9NYJ1 87 aa10.62□□□□□ -0.71
TRIM40-206ENST00000376724 IGSF10Q6WRI0 2623 aa10.62□□□□□ -0.71
TRIM40-206ENST00000376724 ITGB1BP1O14713 200 aa10.62□□□□□ -0.71
TRIM40-206ENST00000376724 FBXO24O75426 580 aa10.62□□□□□ -0.71
TRIM40-206ENST00000376724 RBMXL2O75526 392 aaKnown RBP10.62□□□□□ -0.71
TRIM40-206ENST00000376724 JTBO76095 146 aa10.62□□□□□ -0.71
TRIM40-206ENST00000376724 CST7O76096 145 aa10.62□□□□□ -0.71
TRIM40-206ENST00000376724 ATG12O94817 140 aa10.62□□□□□ -0.71
TRIM40-206ENST00000376724 H2AFB1P0C5Y9 115 aa10.62□□□□□ -0.71
TRIM40-206ENST00000376724 DANCRP0C864 163 aa10.62□□□□□ -0.71
TRIM40-206ENST00000376724 AKR1D1P51857 326 aa10.62□□□□□ -0.71
TRIM40-206ENST00000376724 PAX9P55771 341 aa10.62□□□□□ -0.71
TRIM40-206ENST00000376724 CLINT1Q14677 625 aa10.62□□□□□ -0.71
TRIM40-206ENST00000376724 SSX9Q7RTT3 188 aa10.62□□□□□ -0.71
TRIM40-206ENST00000376724 ODF3L1Q8IXM7 274 aa10.62□□□□□ -0.71
TRIM40-206ENST00000376724 TMEM252Q8N6L7 170 aa10.62□□□□□ -0.71
TRIM40-206ENST00000376724 TMEM217Q8N7C4 229 aa10.62□□□□□ -0.71
TRIM40-206ENST00000376724 CD300LFQ8TDQ1 290 aa10.62□□□□□ -0.71
TRIM40-206ENST00000376724 S1PR3Q99500 378 aa10.62□□□□□ -0.71
TRIM40-206ENST00000376724 MARCH11A6NNE9 402 aa10.61□□□□□ -0.71
TRIM40-206ENST00000376724 SYNGR2O43760 224 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms