RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 FAM90A9PA6NNJ1 464 aa9.61□□□□□ -0.87
LSM2-208ENST00000375661 GABARAPH6UMI1 98 aa9.61□□□□□ -0.87
LSM2-208ENST00000375661 M0QZK8 103 aa9.61□□□□□ -0.87
LSM2-208ENST00000375661 GSTZ1O43708 216 aaPredicted RBP9.61□□□□□ -0.87
LSM2-208ENST00000375661 RBBP9O75884 186 aa9.61□□□□□ -0.87
LSM2-208ENST00000375661 TUSC2O75896 110 aa9.61□□□□□ -0.87
LSM2-208ENST00000375661 OR2F2O95006 317 aa9.61□□□□□ -0.87
LSM2-208ENST00000375661 PMP2P02689 132 aa9.61□□□□□ -0.87
LSM2-208ENST00000375661 GAPDHP04406 335 aaKnown RBP9.61□□□□□ -0.87
LSM2-208ENST00000375661 OR8U9P0C7N5 309 aa9.61□□□□□ -0.87
LSM2-208ENST00000375661 SAA2P0DJI9 122 aaPredicted RBP9.61□□□□□ -0.87
LSM2-208ENST00000375661 OR5H8P0DN80 308 aa9.61□□□□□ -0.87
LSM2-208ENST00000375661 IL3RAP26951 378 aa9.61□□□□□ -0.87
LSM2-208ENST00000375661 ETV6P41212 452 aa9.61□□□□□ -0.87
LSM2-208ENST00000375661 RFX2P48378 723 aa9.61□□□□□ -0.87
LSM2-208ENST00000375661 RAB7AP51149 207 aa9.61□□□□□ -0.87
LSM2-208ENST00000375661 MRPS10P82664 201 aaKnown RBP9.61□□□□□ -0.87
LSM2-208ENST00000375661 CDK10Q15131 360 aa9.61□□□□□ -0.87
LSM2-208ENST00000375661 ZNF79Q15937 498 aa9.61□□□□□ -0.87
LSM2-208ENST00000375661 KHDC1LQ5JSQ8 128 aa9.61□□□□□ -0.87
LSM2-208ENST00000375661 ZNF833PQ6ZTB9 187 aa9.61□□□□□ -0.87
LSM2-208ENST00000375661 OVCH2Q7RTZ1 564 aa9.61□□□□□ -0.87
LSM2-208ENST00000375661 OR8U1Q8NH10 309 aa9.61□□□□□ -0.87
LSM2-208ENST00000375661 SMIM4Q8WVI0 70 aa9.61□□□□□ -0.87
LSM2-208ENST00000375661 RTN4IP1Q8WWV3 396 aaPredicted RBP9.61□□□□□ -0.87
LSM2-208ENST00000375661 FCAMRQ8WWV6 532 aa9.61□□□□□ -0.87
LSM2-208ENST00000375661 RBM14Q96PK6 669 aaKnown RBP9.61□□□□□ -0.87
LSM2-208ENST00000375661 SLC25A33Q9BSK2 321 aa9.61□□□□□ -0.87
LSM2-208ENST00000375661 RBMX2Q9Y388 322 aaKnown RBP9.61□□□□□ -0.87
LSM2-208ENST00000375661 U3KQK5 164 aa9.61□□□□□ -0.87
LSM2-208ENST00000375661 IGKV1D-13A0A0B4J2D9 117 aa9.6□□□□□ -0.87
LSM2-208ENST00000375661 IGHV1-3A0A0C4DH29 117 aa9.6□□□□□ -0.87
LSM2-208ENST00000375661 C3orf84H3BNL1 204 aa9.6□□□□□ -0.87
LSM2-208ENST00000375661 J3QRK9 145 aa9.6□□□□□ -0.87
LSM2-208ENST00000375661 RAB29O14966 203 aa9.6□□□□□ -0.87
LSM2-208ENST00000375661 LANCL1O43813 399 aa9.6□□□□□ -0.87
LSM2-208ENST00000375661 IGKV1-13P0DP09 117 aa9.6□□□□□ -0.87
LSM2-208ENST00000375661 CD24P25063 80 aa9.6□□□□□ -0.87
LSM2-208ENST00000375661 PTBP1P26599 531 aaKnown RBP eCLIP9.6□□□□□ -0.87
LSM2-208ENST00000375661 FCGR2CP31995 323 aa9.6□□□□□ -0.87
LSM2-208ENST00000375661 HRH1P35367 487 aa9.6□□□□□ -0.87
LSM2-208ENST00000375661 THBS3P49746 956 aa9.6□□□□□ -0.87
LSM2-208ENST00000375661 DYRK1AQ13627 763 aa9.6□□□□□ -0.87
LSM2-208ENST00000375661 ABCA11PQ4W5N1 156 aa9.6□□□□□ -0.87
LSM2-208ENST00000375661 RPL39P5Q59GN2 51 aa9.6□□□□□ -0.87
LSM2-208ENST00000375661 ZNF660Q6AZW8 331 aaPredicted RBP9.6□□□□□ -0.87
LSM2-208ENST00000375661 CCDC144NLQ6NUI1 221 aa9.6□□□□□ -0.87
LSM2-208ENST00000375661 TGIF2LXQ8IUE1 241 aa9.6□□□□□ -0.87
LSM2-208ENST00000375661 MRPL41Q8IXM3 137 aaKnown RBP9.6□□□□□ -0.87
LSM2-208ENST00000375661 OR8H3Q8N146 312 aa9.6□□□□□ -0.87
LSM2-208ENST00000375661 DRAM1Q8N682 238 aa9.6□□□□□ -0.87
LSM2-208ENST00000375661 GIMAP1Q8WWP7 306 aa9.6□□□□□ -0.87
LSM2-208ENST00000375661 RBMXL1Q96E39 390 aaKnown RBP9.6□□□□□ -0.87
LSM2-208ENST00000375661 C5orf30Q96GV9 206 aa9.6□□□□□ -0.87
LSM2-208ENST00000375661 GHITMQ9H3K2 345 aa9.6□□□□□ -0.87
LSM2-208ENST00000375661 PIPOXQ9P0Z9 390 aa9.6□□□□□ -0.87
LSM2-208ENST00000375661 GAB2Q9UQC2 676 aa9.6□□□□□ -0.87
LSM2-208ENST00000375661 OR2W1Q9Y3N9 320 aa9.6□□□□□ -0.87
LSM2-208ENST00000375661 ZNF736B4DX44 427 aaPredicted RBP9.59□□□□□ -0.87
LSM2-208ENST00000375661 RAMP3O60896 148 aa9.59□□□□□ -0.87
LSM2-208ENST00000375661 IGLV2-14P01704 120 aa9.59□□□□□ -0.87
LSM2-208ENST00000375661 CT45A6P0DMU7 189 aa9.59□□□□□ -0.87
LSM2-208ENST00000375661 CT45A5P0DMU8 189 aa9.59□□□□□ -0.87
LSM2-208ENST00000375661 CT45A7P0DMV0 189 aa9.59□□□□□ -0.87
LSM2-208ENST00000375661 AADACP22760 399 aa9.59□□□□□ -0.87
LSM2-208ENST00000375661 TAS2R46P59540 309 aa9.59□□□□□ -0.87
LSM2-208ENST00000375661 ACTBP60709 375 aa9.59□□□□□ -0.87
LSM2-208ENST00000375661 SSBP1Q04837 148 aaKnown RBP9.59□□□□□ -0.87
LSM2-208ENST00000375661 SPANXN2Q5MJ10 180 aa9.59□□□□□ -0.87
LSM2-208ENST00000375661 FAM71F2Q6NXP2 309 aa9.59□□□□□ -0.87
LSM2-208ENST00000375661 DHRS11Q6UWP2 260 aa9.59□□□□□ -0.87
LSM2-208ENST00000375661 ETV3LQ6ZN32 361 aa9.59□□□□□ -0.87
LSM2-208ENST00000375661 MOB3BQ86TA1 216 aa9.59□□□□□ -0.87
LSM2-208ENST00000375661 TMEM229BQ8NBD8 167 aa9.59□□□□□ -0.87
LSM2-208ENST00000375661 OR5H2Q8NGV7 314 aa9.59□□□□□ -0.87
LSM2-208ENST00000375661 OR56B4Q8NH76 319 aa9.59□□□□□ -0.87
LSM2-208ENST00000375661 NABP2Q9BQ15 211 aa9.59□□□□□ -0.87
LSM2-208ENST00000375661 MRPL20Q9BYC9 149 aaKnown RBP9.59□□□□□ -0.87
LSM2-208ENST00000375661 TINAGL1Q9GZM7 467 aaPredicted RBP9.59□□□□□ -0.87
LSM2-208ENST00000375661 SRRQ9GZT4 340 aa9.59□□□□□ -0.87
LSM2-208ENST00000375661 OR2D2Q9H210 308 aa9.59□□□□□ -0.87
LSM2-208ENST00000375661 ZFP57Q9NU63 452 aa9.59□□□□□ -0.87
LSM2-208ENST00000375661 SDHAF2Q9NX18 166 aa9.59□□□□□ -0.87
LSM2-208ENST00000375661 EHFQ9NZC4 300 aa9.59□□□□□ -0.87
LSM2-208ENST00000375661 PTTG2Q9NZH5 202 aa9.59□□□□□ -0.87
LSM2-208ENST00000375661 DNAH9Q9NYC9 4486 aa9.58□□□□□ -0.88
LSM2-208ENST00000375661 IGHV3-72A0A0B4J1Y9 119 aa9.58□□□□□ -0.88
LSM2-208ENST00000375661 PSMB11A5LHX3 300 aa9.58□□□□□ -0.88
LSM2-208ENST00000375661 M0QYG6 137 aa9.58□□□□□ -0.88
LSM2-208ENST00000375661 TXNL1O43396 289 aa9.58□□□□□ -0.88
LSM2-208ENST00000375661 PPYP01298 95 aa9.58□□□□□ -0.88
LSM2-208ENST00000375661 CD74P04233 296 aa9.58□□□□□ -0.88
LSM2-208ENST00000375661 CD3DP04234 171 aa9.58□□□□□ -0.88
LSM2-208ENST00000375661 AMY1AP04745 511 aa9.58□□□□□ -0.88
LSM2-208ENST00000375661 AMY2AP04746 511 aa9.58□□□□□ -0.88
LSM2-208ENST00000375661 MYCNOSP40205 109 aa9.58□□□□□ -0.88
LSM2-208ENST00000375661 GPR12P47775 334 aa9.58□□□□□ -0.88
LSM2-208ENST00000375661 LUMP51884 338 aaPredicted RBP9.58□□□□□ -0.88
LSM2-208ENST00000375661 PYDC2Q56P42 97 aa9.58□□□□□ -0.88
LSM2-208ENST00000375661 THNSL2Q86YJ6 484 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms