RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 PPIAL4GP0DN37 164 aa15.24■□□□□ 0.03
PTPDC1-202ENST00000375360 PRB3Q04118 309 aaPredicted RBP15.24■□□□□ 0.03
PTPDC1-202ENST00000375360 ZNF596Q8TC21 504 aa15.24■□□□□ 0.03
PTPDC1-202ENST00000375360 RGS13O14921 159 aa15.24■□□□□ 0.03
PTPDC1-202ENST00000375360 ZP3P21754 424 aa15.24■□□□□ 0.03
PTPDC1-202ENST00000375360 FHL1Q13642 323 aa15.24■□□□□ 0.03
PTPDC1-202ENST00000375360 GCSAMQ8N6F7 178 aa15.24■□□□□ 0.03
PTPDC1-202ENST00000375360 BTF3L4Q96K17 158 aa15.24■□□□□ 0.03
PTPDC1-202ENST00000375360 IGKV3D-15A0A087WSY6 115 aa15.23■□□□□ 0.03
PTPDC1-202ENST00000375360 IGHV3-48P01763 117 aa15.23■□□□□ 0.03
PTPDC1-202ENST00000375360 KIR2DL2P43627 348 aaPredicted RBP15.23■□□□□ 0.03
PTPDC1-202ENST00000375360 PSG5Q15238 335 aa15.23■□□□□ 0.03
PTPDC1-202ENST00000375360 ZNF660Q6AZW8 331 aaPredicted RBP15.23■□□□□ 0.03
PTPDC1-202ENST00000375360 ANKHD1Q8IWZ3 2542 aaKnown RBP15.23■□□□□ 0.03
PTPDC1-202ENST00000375360 AURKAIP1Q9NWT8 199 aaPredicted RBP15.23■□□□□ 0.03
PTPDC1-202ENST00000375360 DEDDO75618 318 aa15.23■□□□□ 0.03
PTPDC1-202ENST00000375360 APOBEC3AP31941 199 aaPredicted RBP15.23■□□□□ 0.03
PTPDC1-202ENST00000375360 OR1L4Q8NGR5 311 aa15.23■□□□□ 0.03
PTPDC1-202ENST00000375360 SONP18583 2426 aaKnown RBP15.23■□□□□ 0.03
PTPDC1-202ENST00000375360 TMEM218A2RU14 115 aa15.23■□□□□ 0.03
PTPDC1-202ENST00000375360 MARCH11A6NNE9 402 aa15.23■□□□□ 0.03
PTPDC1-202ENST00000375360 MPTX1A8MV57 137 aa15.23■□□□□ 0.03
PTPDC1-202ENST00000375360 CRYGSP22914 178 aa15.23■□□□□ 0.03
PTPDC1-202ENST00000375360 LGALS7P47929 136 aa15.23■□□□□ 0.03
PTPDC1-202ENST00000375360 RPL39P5Q59GN2 51 aa15.23■□□□□ 0.03
PTPDC1-202ENST00000375360 SELENOHQ8IZQ5 122 aaKnown RBP15.23■□□□□ 0.03
PTPDC1-202ENST00000375360 ABHD12Q8N2K0 398 aa15.23■□□□□ 0.03
PTPDC1-202ENST00000375360 MDS2Q8NDY4 140 aa15.23■□□□□ 0.03
PTPDC1-202ENST00000375360 OR13A1Q8NGR1 328 aa15.23■□□□□ 0.03
PTPDC1-202ENST00000375360 SLC25A28Q96A46 364 aa15.23■□□□□ 0.03
PTPDC1-202ENST00000375360 ISOC2Q96AB3 205 aa15.23■□□□□ 0.03
PTPDC1-202ENST00000375360 SLC2A8Q9NY64 477 aa15.23■□□□□ 0.03
PTPDC1-202ENST00000375360 ERVFRD-1P60508 538 aa15.22■□□□□ 0.03
PTPDC1-202ENST00000375360 ZNF66Q6ZN08 573 aa15.22■□□□□ 0.03
PTPDC1-202ENST00000375360 NUDT16L1Q9BRJ7 211 aaKnown RBP15.22■□□□□ 0.03
PTPDC1-202ENST00000375360 IDI2-AS1Q9NZ38 188 aa15.22■□□□□ 0.03
PTPDC1-202ENST00000375360 NTF3P20783 257 aa15.22■□□□□ 0.03
PTPDC1-202ENST00000375360 ATP5J2P56134 94 aa15.22■□□□□ 0.03
PTPDC1-202ENST00000375360 OR5I1Q13606 314 aa15.22■□□□□ 0.03
PTPDC1-202ENST00000375360 TMEM241Q24JQ0 296 aa15.22■□□□□ 0.03
PTPDC1-202ENST00000375360 TMEM106BQ9NUM4 274 aa15.22■□□□□ 0.03
PTPDC1-202ENST00000375360 B9A039 149 aa15.22■□□□□ 0.03
PTPDC1-202ENST00000375360 WNT5AP41221 380 aa15.22■□□□□ 0.03
PTPDC1-202ENST00000375360 B3GALT5-AS1P59052 145 aa15.22■□□□□ 0.03
PTPDC1-202ENST00000375360 DUXBA0A1W2PPF3 345 aa15.22■□□□□ 0.03
PTPDC1-202ENST00000375360 LYNX1G3V0Z9 82 aa15.22■□□□□ 0.03
PTPDC1-202ENST00000375360 IL18BPO95998 194 aa15.22■□□□□ 0.03
PTPDC1-202ENST00000375360 LYNX1P0DP58 116 aa15.22■□□□□ 0.03
PTPDC1-202ENST00000375360 ZNF345Q14585 488 aa15.22■□□□□ 0.03
PTPDC1-202ENST00000375360 SLC24A4Q8NFF2 622 aa15.22■□□□□ 0.03
PTPDC1-202ENST00000375360 OR4F17Q8NGA8 305 aa15.22■□□□□ 0.03
PTPDC1-202ENST00000375360 TMEM204Q9BSN7 226 aa15.22■□□□□ 0.03
PTPDC1-202ENST00000375360 CHODLQ9H9P2 273 aa15.22■□□□□ 0.03
PTPDC1-202ENST00000375360 IGKV1-12A0A0C4DH73 117 aa15.21■□□□□ 0.03
PTPDC1-202ENST00000375360 PQLC2LA1A4F0 135 aa15.21■□□□□ 0.03
PTPDC1-202ENST00000375360 IGKV1D-12P01611 117 aa15.21■□□□□ 0.03
PTPDC1-202ENST00000375360 GAPDHP04406 335 aaKnown RBP15.21■□□□□ 0.03
PTPDC1-202ENST00000375360 ZP1P60852 638 aa15.21■□□□□ 0.03
PTPDC1-202ENST00000375360 LRP11Q86VZ4 500 aa15.21■□□□□ 0.03
PTPDC1-202ENST00000375360 OR4X1Q8NH49 305 aa15.21■□□□□ 0.03
PTPDC1-202ENST00000375360 NDFIP1Q9BT67 221 aa15.21■□□□□ 0.03
PTPDC1-202ENST00000375360 SERTM2A0A1B0GWG4 89 aa15.21■□□□□ 0.03
PTPDC1-202ENST00000375360 PAGE4O60829 102 aa15.21■□□□□ 0.03
PTPDC1-202ENST00000375360 F12P00748 615 aaPredicted RBP15.21■□□□□ 0.03
PTPDC1-202ENST00000375360 NMBP08949 121 aa15.21■□□□□ 0.03
PTPDC1-202ENST00000375360 HSD17B13Q7Z5P4 300 aaPredicted RBP15.21■□□□□ 0.03
PTPDC1-202ENST00000375360 DOLPP1Q86YN1 238 aa15.21■□□□□ 0.03
PTPDC1-202ENST00000375360 AAMDCQ9H7C9 122 aa15.21■□□□□ 0.03
PTPDC1-202ENST00000375360 ASCL3Q9NQ33 180 aa15.21■□□□□ 0.03
PTPDC1-202ENST00000375360 PRR14LQ5THK1 2151 aa15.21■□□□□ 0.03
PTPDC1-202ENST00000375360 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.21■□□□□ 0.02
PTPDC1-202ENST00000375360 ZG16O60844 167 aa15.21■□□□□ 0.02
PTPDC1-202ENST00000375360 TMEM37Q8WXS4 190 aa15.21■□□□□ 0.02
PTPDC1-202ENST00000375360 MRPL37Q9BZE1 423 aaKnown RBP15.21■□□□□ 0.02
PTPDC1-202ENST00000375360 MALRD1Q5VYJ5 2156 aa15.21■□□□□ 0.02
PTPDC1-202ENST00000375360 IGHV3OR16-10A0A075B7F0 116 aa15.2■□□□□ 0.02
PTPDC1-202ENST00000375360 CHEK1O14757 476 aa15.2■□□□□ 0.02
PTPDC1-202ENST00000375360 SEC11BP0C7V7 166 aa15.2■□□□□ 0.02
PTPDC1-202ENST00000375360 CD1BP29016 333 aa15.2■□□□□ 0.02
PTPDC1-202ENST00000375360 RPL27AP46776 148 aaKnown RBP15.2■□□□□ 0.02
PTPDC1-202ENST00000375360 TMEM187Q14656 261 aa15.2■□□□□ 0.02
PTPDC1-202ENST00000375360 TEPPQ6URK8 271 aa15.2■□□□□ 0.02
PTPDC1-202ENST00000375360 TMEM140Q9NV12 185 aa15.2■□□□□ 0.02
PTPDC1-202ENST00000375360 CEP295Q9C0D2 2601 aa15.2■□□□□ 0.02
PTPDC1-202ENST00000375360 G3V3Q6 166 aa15.2■□□□□ 0.02
PTPDC1-202ENST00000375360 NDUFA2O43678 99 aa15.2■□□□□ 0.02
PTPDC1-202ENST00000375360 CRYBA1P05813 215 aa15.2■□□□□ 0.02
PTPDC1-202ENST00000375360 IGKV1D-8A0A087WSZ0 117 aa15.2■□□□□ 0.02
PTPDC1-202ENST00000375360 HSBP1L1C9JCN9 74 aa15.2■□□□□ 0.02
PTPDC1-202ENST00000375360 COX6B1P14854 86 aa15.2■□□□□ 0.02
PTPDC1-202ENST00000375360 IFITM2Q01629 132 aa15.2■□□□□ 0.02
PTPDC1-202ENST00000375360 PLPPR1Q8TBJ4 325 aa15.2■□□□□ 0.02
PTPDC1-202ENST00000375360 RBKSQ9H477 322 aa15.2■□□□□ 0.02
PTPDC1-202ENST00000375360 IGHV1-18A0A0C4DH31 117 aa15.19■□□□□ 0.02
PTPDC1-202ENST00000375360 IQCF6A8MYZ5 107 aa15.19■□□□□ 0.02
PTPDC1-202ENST00000375360 M0QZ24 198 aa15.19■□□□□ 0.02
PTPDC1-202ENST00000375360 SPP1P10451 314 aa15.19■□□□□ 0.02
PTPDC1-202ENST00000375360 SLC35E4Q6ICL7 350 aa15.19■□□□□ 0.02
PTPDC1-202ENST00000375360 TCEAL7Q9BRU2 100 aa15.19■□□□□ 0.02
PTPDC1-202ENST00000375360 TLN1Q9Y490 2541 aaKnown RBP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms