RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 TMEM268Q5VZI3 342 aa6.94□□□□□ -1.3
UBR4-202ENST00000375224 ZNF497Q6ZNH5 498 aa6.94□□□□□ -1.3
UBR4-202ENST00000375224 H1FOOQ8IZA3 346 aaPredicted RBP6.94□□□□□ -1.3
UBR4-202ENST00000375224 GAPTQ8N292 157 aa6.94□□□□□ -1.3
UBR4-202ENST00000375224 PBDC1Q9BVG4 233 aa6.94□□□□□ -1.3
UBR4-202ENST00000375224 TAAR3PQ9P1P4 343 aa6.94□□□□□ -1.3
UBR4-202ENST00000375224 M0QZ24 198 aa6.93□□□□□ -1.3
UBR4-202ENST00000375224 SIRPB1O00241 398 aa6.93□□□□□ -1.3
UBR4-202ENST00000375224 IL6RP08887 468 aaPredicted RBP6.93□□□□□ -1.3
UBR4-202ENST00000375224 WNT2P09544 360 aa6.93□□□□□ -1.3
UBR4-202ENST00000375224 P2RY1P47900 373 aa6.93□□□□□ -1.3
UBR4-202ENST00000375224 SELENOVP59797 346 aa6.93□□□□□ -1.3
UBR4-202ENST00000375224 ZNF818PQ6ZRF7 136 aa6.93□□□□□ -1.3
UBR4-202ENST00000375224 RNASEH2CQ8TDP1 164 aaKnown RBP6.93□□□□□ -1.3
UBR4-202ENST00000375224 ZNF48Q96MX3 618 aaPredicted RBP6.93□□□□□ -1.3
UBR4-202ENST00000375224 PCGF1Q9BSM1 259 aa6.93□□□□□ -1.3
UBR4-202ENST00000375224 HES4Q9HCC6 221 aa6.93□□□□□ -1.3
UBR4-202ENST00000375224 KCNIP1Q9NZI2 227 aa6.93□□□□□ -1.3
UBR4-202ENST00000375224 TRAPPC2LQ9UL33 140 aa6.93□□□□□ -1.3
UBR4-202ENST00000375224 IGHV2OR16-5A0A0B4J2B6 119 aa6.93□□□□□ -1.3
UBR4-202ENST00000375224 IGKV1-6A0A0C4DH72 117 aa6.93□□□□□ -1.3
UBR4-202ENST00000375224 H0Y980 276 aa6.93□□□□□ -1.3
UBR4-202ENST00000375224 GPR137BO60478 399 aa6.93□□□□□ -1.3
UBR4-202ENST00000375224 UCP1P25874 307 aa6.93□□□□□ -1.3
UBR4-202ENST00000375224 APOBEC3AP31941 199 aaPredicted RBP6.93□□□□□ -1.3
UBR4-202ENST00000375224 ERVFRD-1P60508 538 aa6.93□□□□□ -1.3
UBR4-202ENST00000375224 RPS23P62266 143 aaKnown RBP6.93□□□□□ -1.3
UBR4-202ENST00000375224 ALKBH6Q3KRA9 238 aa6.93□□□□□ -1.3
UBR4-202ENST00000375224 TIMM23BQ5SRD1 257 aa6.93□□□□□ -1.3
UBR4-202ENST00000375224 LDLRAD2Q5SZI1 272 aa6.93□□□□□ -1.3
UBR4-202ENST00000375224 ZNF324BQ6AW86 544 aaPredicted RBP6.93□□□□□ -1.3
UBR4-202ENST00000375224 PRR27Q6MZM9 219 aa6.93□□□□□ -1.3
UBR4-202ENST00000375224 PCSK4Q6UW60 755 aa6.93□□□□□ -1.3
UBR4-202ENST00000375224 TMEM183AQ8IXX5 376 aa6.93□□□□□ -1.3
UBR4-202ENST00000375224 LYG1Q8N1E2 194 aa6.93□□□□□ -1.3
UBR4-202ENST00000375224 ZNF738Q8NE65 137 aa6.93□□□□□ -1.3
UBR4-202ENST00000375224 ORAOV1Q8WV07 137 aa6.93□□□□□ -1.3
UBR4-202ENST00000375224 LRFN3Q9BTN0 628 aa6.93□□□□□ -1.3
UBR4-202ENST00000375224 TAF9BQ9HBM6 251 aa6.93□□□□□ -1.3
UBR4-202ENST00000375224 WIPI2Q9Y4P8 454 aa6.93□□□□□ -1.3
UBR4-202ENST00000375224 SLC25A15Q9Y619 301 aa6.93□□□□□ -1.3
UBR4-202ENST00000375224 GTF3C1Q12789 2109 aa6.93□□□□□ -1.3
UBR4-202ENST00000375224 BORCS7-ASMTA0A0B4J1R7 106 aa6.93□□□□□ -1.3
UBR4-202ENST00000375224 IGHV1-18A0A0C4DH31 117 aa6.93□□□□□ -1.3
UBR4-202ENST00000375224 HSD17B6O14756 317 aa6.93□□□□□ -1.3
UBR4-202ENST00000375224 HAND1O96004 215 aa6.93□□□□□ -1.3
UBR4-202ENST00000375224 OR4A8P0C604 315 aa6.93□□□□□ -1.3
UBR4-202ENST00000375224 LMO1P25800 156 aa6.93□□□□□ -1.3
UBR4-202ENST00000375224 RANP62826 216 aaKnown RBP6.93□□□□□ -1.3
UBR4-202ENST00000375224 C20orf204Q6ZNR8 217 aa6.93□□□□□ -1.3
UBR4-202ENST00000375224 RBMXL3Q8N7X1 1067 aaKnown RBP6.93□□□□□ -1.3
UBR4-202ENST00000375224 OR10V1Q8NGI7 309 aa6.93□□□□□ -1.3
UBR4-202ENST00000375224 OR5D13Q8NGL4 314 aa6.93□□□□□ -1.3
UBR4-202ENST00000375224 SFXN3Q9BWM7 321 aa6.93□□□□□ -1.3
UBR4-202ENST00000375224 CCL28Q9NRJ3 127 aa6.93□□□□□ -1.3
UBR4-202ENST00000375224 TMEM30CPA0ZSE6 113 aa6.92□□□□□ -1.3
UBR4-202ENST00000375224 HPRT1P00492 218 aa6.92□□□□□ -1.3
UBR4-202ENST00000375224 OR13C7P0DN81 318 aa6.92□□□□□ -1.3
UBR4-202ENST00000375224 MC5RP33032 325 aa6.92□□□□□ -1.3
UBR4-202ENST00000375224 VAMP3Q15836 100 aa6.92□□□□□ -1.3
UBR4-202ENST00000375224 TEX38Q6PEX7 206 aa6.92□□□□□ -1.3
UBR4-202ENST00000375224 SEM1Q6ZVN7 128 aa6.92□□□□□ -1.3
UBR4-202ENST00000375224 OR4D5Q8NGN0 318 aa6.92□□□□□ -1.3
UBR4-202ENST00000375224 PRR7Q8TB68 274 aa6.92□□□□□ -1.3
UBR4-202ENST00000375224 MUCL1Q96DR8 90 aa6.92□□□□□ -1.3
UBR4-202ENST00000375224 SMIM8Q96KF7 97 aa6.92□□□□□ -1.3
UBR4-202ENST00000375224 MBNL3Q9NUK0 354 aaKnown RBP6.92□□□□□ -1.3
UBR4-202ENST00000375224 IGKV1D-13A0A0B4J2D9 117 aa6.92□□□□□ -1.3
UBR4-202ENST00000375224 H0YL77 283 aa6.92□□□□□ -1.3
UBR4-202ENST00000375224 IFNL4K9M1U5 179 aa6.92□□□□□ -1.3
UBR4-202ENST00000375224 MLNRO43193 412 aa6.92□□□□□ -1.3
UBR4-202ENST00000375224 IGKV1-13P0DP09 117 aa6.92□□□□□ -1.3
UBR4-202ENST00000375224 VDAC1P21796 283 aa6.92□□□□□ -1.3
UBR4-202ENST00000375224 Q6ZRG5 221 aa6.92□□□□□ -1.3
UBR4-202ENST00000375224 C1orf87Q8N0U7 546 aa6.92□□□□□ -1.3
UBR4-202ENST00000375224 RPUSD4Q96CM3 377 aaKnown RBP6.92□□□□□ -1.3
UBR4-202ENST00000375224 FKBP11Q9NYL4 201 aa6.92□□□□□ -1.3
UBR4-202ENST00000375224 ERRFI1Q9UJM3 462 aaPredicted RBP6.92□□□□□ -1.3
UBR4-202ENST00000375224 INTS1Q8N201 2190 aaKnown RBP6.92□□□□□ -1.3
UBR4-202ENST00000375224 CLEC18AA5D8T8 446 aa6.92□□□□□ -1.3
UBR4-202ENST00000375224 PROB1E7EW31 1015 aa6.92□□□□□ -1.3
UBR4-202ENST00000375224 PGLYRP1O75594 196 aaPredicted RBP6.92□□□□□ -1.3
UBR4-202ENST00000375224 AMBPP02760 352 aa6.92□□□□□ -1.3
UBR4-202ENST00000375224 MMP9P14780 707 aa6.92□□□□□ -1.3
UBR4-202ENST00000375224 F2RP25116 425 aa6.92□□□□□ -1.3
UBR4-202ENST00000375224 OR10J1P30954 320 aa6.92□□□□□ -1.3
UBR4-202ENST00000375224 NKX2-1P43699 371 aaPredicted RBP6.92□□□□□ -1.3
UBR4-202ENST00000375224 FABP6P51161 128 aa6.92□□□□□ -1.3
UBR4-202ENST00000375224 TMEM33P57088 247 aa6.92□□□□□ -1.3
UBR4-202ENST00000375224 ARF6P62330 175 aa6.92□□□□□ -1.3
UBR4-202ENST00000375224 SLAQ13239 276 aa6.92□□□□□ -1.3
UBR4-202ENST00000375224 SMIM21Q3B7S5 101 aa6.92□□□□□ -1.3
UBR4-202ENST00000375224 SLC35E4Q6ICL7 350 aa6.92□□□□□ -1.3
UBR4-202ENST00000375224 LRP11Q86VZ4 500 aa6.92□□□□□ -1.3
UBR4-202ENST00000375224 CLEC18CQ8NCF0 446 aa6.92□□□□□ -1.3
UBR4-202ENST00000375224 PLPPR1Q8TBJ4 325 aa6.92□□□□□ -1.3
UBR4-202ENST00000375224 FAM57AQ8TBR7 257 aa6.92□□□□□ -1.3
UBR4-202ENST00000375224 IL1F10Q8WWZ1 152 aa6.92□□□□□ -1.3
UBR4-202ENST00000375224 FRZBQ92765 325 aa6.92□□□□□ -1.3
UBR4-202ENST00000375224 FBXL17Q9UF56 701 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms