RNA–Protein interactions for RNA: ENST00000374685.8

RXRB-202, Transcript of retinoid X receptor beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RXRB, Length 2,846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-202ENST00000374685 IGKV1D-39P04432 117 aa15.32■□□□□ 0.04
RXRB-202ENST00000374685 RPS10P46783 165 aaKnown RBP15.32■□□□□ 0.04
RXRB-202ENST00000374685 EDDM3BP56851 147 aa15.32■□□□□ 0.04
RXRB-202ENST00000374685 SMIM21Q3B7S5 101 aa15.32■□□□□ 0.04
RXRB-202ENST00000374685 HIST3H2BBQ8N257 126 aa15.32■□□□□ 0.04
RXRB-202ENST00000374685 COMMD1Q8N668 190 aa15.32■□□□□ 0.04
RXRB-202ENST00000374685 TMEM252Q8N6L7 170 aa15.32■□□□□ 0.04
RXRB-202ENST00000374685 CD177Q8N6Q3 437 aa15.32■□□□□ 0.04
RXRB-202ENST00000374685 ZNRF1Q8ND25 227 aa15.32■□□□□ 0.04
RXRB-202ENST00000374685 OR5R1Q8NH85 324 aa15.32■□□□□ 0.04
RXRB-202ENST00000374685 TMEM171Q8WVE6 324 aa15.32■□□□□ 0.04
RXRB-202ENST00000374685 RAMP3O60896 148 aa15.32■□□□□ 0.04
RXRB-202ENST00000374685 KRASP01116 189 aa15.32■□□□□ 0.04
RXRB-202ENST00000374685 DYNLT3P51808 116 aa15.32■□□□□ 0.04
RXRB-202ENST00000374685 MIDNQ504T8 468 aa15.32■□□□□ 0.04
RXRB-202ENST00000374685 GPR157Q5UAW9 335 aa15.32■□□□□ 0.04
RXRB-202ENST00000374685 MOB1BQ7L9L4 216 aa15.32■□□□□ 0.04
RXRB-202ENST00000374685 BEND2Q8NDZ0 799 aa15.32■□□□□ 0.04
RXRB-202ENST00000374685 FAM213BQ8TBF2 198 aa15.32■□□□□ 0.04
RXRB-202ENST00000374685 KITLGP21583 273 aa15.31■□□□□ 0.04
RXRB-202ENST00000374685 RPS16P62249 146 aaKnown RBP15.31■□□□□ 0.04
RXRB-202ENST00000374685 RPS23P62266 143 aaKnown RBP15.31■□□□□ 0.04
RXRB-202ENST00000374685 ABHD14AQ9BUJ0 271 aa15.31■□□□□ 0.04
RXRB-202ENST00000374685 GAPDHP04406 335 aaKnown RBP15.31■□□□□ 0.04
RXRB-202ENST00000374685 USF2Q15853 346 aaPredicted RBP15.31■□□□□ 0.04
RXRB-202ENST00000374685 KHDC3LQ587J8 217 aa15.31■□□□□ 0.04
RXRB-202ENST00000374685 ZCCHC24Q8N2G6 241 aaKnown RBP15.31■□□□□ 0.04
RXRB-202ENST00000374685 FAM212BQ9NTI7 297 aaPredicted RBP15.31■□□□□ 0.04
RXRB-202ENST00000374685 A8MWP6 167 aa15.3■□□□□ 0.04
RXRB-202ENST00000374685 OR2C1O95371 312 aa15.3■□□□□ 0.04
RXRB-202ENST00000374685 TSPAN15O95858 294 aa15.3■□□□□ 0.04
RXRB-202ENST00000374685 WFDC8Q8IUA0 241 aa15.3■□□□□ 0.04
RXRB-202ENST00000374685 NDUFAF3Q9BU61 184 aa15.3■□□□□ 0.04
RXRB-202ENST00000374685 HES4Q9HCC6 221 aa15.3■□□□□ 0.04
RXRB-202ENST00000374685 MBNL3Q9NUK0 354 aaKnown RBP15.3■□□□□ 0.04
RXRB-202ENST00000374685 MARCH11A6NNE9 402 aa15.3■□□□□ 0.04
RXRB-202ENST00000374685 PRDX2P32119 198 aa15.3■□□□□ 0.04
RXRB-202ENST00000374685 KLF3P57682 345 aaPredicted RBP15.3■□□□□ 0.04
RXRB-202ENST00000374685 TIMM23BQ5SRD1 257 aa15.3■□□□□ 0.04
RXRB-202ENST00000374685 SLC25A24Q6NUK1 477 aa15.3■□□□□ 0.04
RXRB-202ENST00000374685 SPNS3Q6ZMD2 512 aa15.3■□□□□ 0.04
RXRB-202ENST00000374685 ITLN1Q8WWA0 313 aa15.3■□□□□ 0.04
RXRB-202ENST00000374685 GPR61Q9BZJ8 451 aa15.3■□□□□ 0.04
RXRB-202ENST00000374685 PLEKHF2Q9H8W4 249 aa15.3■□□□□ 0.04
RXRB-202ENST00000374685 PSG11Q9UQ72 335 aa15.3■□□□□ 0.04
RXRB-202ENST00000374685 PPP1R2P9O14990 202 aa15.3■□□□□ 0.04
RXRB-202ENST00000374685 ATXN7O15265 892 aaPredicted RBP15.3■□□□□ 0.04
RXRB-202ENST00000374685 RBMXL2O75526 392 aaKnown RBP15.3■□□□□ 0.04
RXRB-202ENST00000374685 IGKV1-5P01602 117 aa15.3■□□□□ 0.04
RXRB-202ENST00000374685 SNCAP37840 140 aa15.3■□□□□ 0.04
RXRB-202ENST00000374685 TNFRSF9Q07011 255 aa15.3■□□□□ 0.04
RXRB-202ENST00000374685 NOL4LQ96MY1 436 aaPredicted RBP15.3■□□□□ 0.04
RXRB-202ENST00000374685 ABCA4P78363 2273 aa15.3■□□□□ 0.04
RXRB-202ENST00000374685 UMAD1C9J7I0 102 aa15.29■□□□□ 0.04
RXRB-202ENST00000374685 SOD3P08294 240 aa15.29■□□□□ 0.04
RXRB-202ENST00000374685 G6PCP35575 357 aa15.29■□□□□ 0.04
RXRB-202ENST00000374685 RPL30P62888 115 aaKnown RBP15.29■□□□□ 0.04
RXRB-202ENST00000374685 ZNF585BQ52M93 769 aa15.29■□□□□ 0.04
RXRB-202ENST00000374685 SPINK9Q5DT21 86 aa15.29■□□□□ 0.04
RXRB-202ENST00000374685 MBNL2Q5VZF2 373 aaKnown RBP15.29■□□□□ 0.04
RXRB-202ENST00000374685 WIPI2Q9Y4P8 454 aa15.29■□□□□ 0.04
RXRB-202ENST00000374685 MBP02144 154 aa15.29■□□□□ 0.04
RXRB-202ENST00000374685 GUK1Q16774 197 aa15.29■□□□□ 0.04
RXRB-202ENST00000374685 TGIF2LYQ8IUE0 185 aa15.29■□□□□ 0.04
RXRB-202ENST00000374685 OR2G3Q8NGZ4 309 aa15.29■□□□□ 0.04
RXRB-202ENST00000374685 LEAP2Q969E1 77 aa15.29■□□□□ 0.04
RXRB-202ENST00000374685 EIF5A2Q9GZV4 153 aaKnown RBP15.29■□□□□ 0.04
RXRB-202ENST00000374685 LYRM2Q9NU23 88 aaPredicted RBP15.29■□□□□ 0.04
RXRB-202ENST00000374685 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.28■□□□□ 0.04
RXRB-202ENST00000374685 FAM87AP0C7U9 286 aa15.28■□□□□ 0.04
RXRB-202ENST00000374685 METTL15P1P0C7V9 234 aa15.28■□□□□ 0.04
RXRB-202ENST00000374685 ATP6V0CP27449 155 aa15.28■□□□□ 0.04
RXRB-202ENST00000374685 ID3Q02535 119 aa15.28■□□□□ 0.04
RXRB-202ENST00000374685 GFRALQ6UXV0 394 aa15.28■□□□□ 0.04
RXRB-202ENST00000374685 SPACA3Q8IXA5 215 aa15.28■□□□□ 0.04
RXRB-202ENST00000374685 UNKLQ9H9P5 680 aaKnown RBP15.28■□□□□ 0.04
RXRB-202ENST00000374685 OOEPA6NGQ2 149 aa15.28■□□□□ 0.04
RXRB-202ENST00000374685 PRRG2O14669 202 aa15.28■□□□□ 0.04
RXRB-202ENST00000374685 HIST1H2BKO60814 126 aa15.28■□□□□ 0.04
RXRB-202ENST00000374685 HIST1H2BJP06899 126 aa15.28■□□□□ 0.04
RXRB-202ENST00000374685 HIST1H2BOP23527 126 aa15.28■□□□□ 0.04
RXRB-202ENST00000374685 HIST1H2BBP33778 126 aa15.28■□□□□ 0.04
RXRB-202ENST00000374685 HIST1H2BDP58876 126 aa15.28■□□□□ 0.04
RXRB-202ENST00000374685 HIST1H2BCP62807 126 aa15.28■□□□□ 0.04
RXRB-202ENST00000374685 HIST2H2BEQ16778 126 aa15.28■□□□□ 0.04
RXRB-202ENST00000374685 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.28■□□□□ 0.04
RXRB-202ENST00000374685 DUX4L9Q6RFH8 374 aaPredicted RBP15.28■□□□□ 0.04
RXRB-202ENST00000374685 DOLPP1Q86YN1 238 aa15.28■□□□□ 0.04
RXRB-202ENST00000374685 FAM57AQ8TBR7 257 aa15.28■□□□□ 0.04
RXRB-202ENST00000374685 HIST1H2BHQ93079 126 aa15.28■□□□□ 0.04
RXRB-202ENST00000374685 HIST1H2BNQ99877 126 aa15.28■□□□□ 0.04
RXRB-202ENST00000374685 HIST1H2BMQ99879 126 aa15.28■□□□□ 0.04
RXRB-202ENST00000374685 IGKV1D-17A0A075B6S4 117 aa15.27■□□□□ 0.04
RXRB-202ENST00000374685 GCSAMQ8N6F7 178 aa15.27■□□□□ 0.04
RXRB-202ENST00000374685 C5orf30Q96GV9 206 aa15.27■□□□□ 0.04
RXRB-202ENST00000374685 LIN7CQ9NUP9 197 aaKnown RBP15.27■□□□□ 0.04
RXRB-202ENST00000374685 GNG12Q9UBI6 72 aa15.27■□□□□ 0.04
RXRB-202ENST00000374685 ODF3L1Q8IXM7 274 aa15.27■□□□□ 0.03
RXRB-202ENST00000374685 COL25A1Q9BXS0 654 aaPredicted RBP15.27■□□□□ 0.03
RXRB-202ENST00000374685 SLC25A31Q9H0C2 315 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 134 ms