RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 KIAA1644Q3SXP7 199 aa8.09□□□□□ -1.11
SF3A3-201ENST00000373019 ZDHHC23Q8IYP9 409 aa8.09□□□□□ -1.11
SF3A3-201ENST00000373019 SPSB1Q96BD6 273 aa8.09□□□□□ -1.11
SF3A3-201ENST00000373019 NCOA6Q14686 2063 aaPredicted RBP8.09□□□□□ -1.11
SF3A3-201ENST00000373019 UBE2L5PA0A1B0GUS4 154 aa8.09□□□□□ -1.11
SF3A3-201ENST00000373019 ALG1L2C9J202 215 aa8.09□□□□□ -1.11
SF3A3-201ENST00000373019 SPRY1O43609 319 aaPredicted RBP8.09□□□□□ -1.11
SF3A3-201ENST00000373019 CDAP32320 146 aa8.09□□□□□ -1.11
SF3A3-201ENST00000373019 RSPO4Q2I0M5 234 aaPredicted RBP8.09□□□□□ -1.11
SF3A3-201ENST00000373019 OCC1Q8TAD7 63 aa8.09□□□□□ -1.11
SF3A3-201ENST00000373019 ST6GALNAC6Q969X2 333 aa8.09□□□□□ -1.11
SF3A3-201ENST00000373019 RERGQ96A58 199 aaPredicted RBP8.09□□□□□ -1.11
SF3A3-201ENST00000373019 NXF5Q9H1B4 397 aaKnown RBP8.09□□□□□ -1.11
SF3A3-201ENST00000373019 IL36BQ9NZH7 164 aa8.09□□□□□ -1.11
SF3A3-201ENST00000373019 IL36GQ9NZH8 169 aa8.09□□□□□ -1.11
SF3A3-201ENST00000373019 ERRFI1Q9UJM3 462 aaPredicted RBP8.09□□□□□ -1.11
SF3A3-201ENST00000373019 THADAQ6YHU6 1953 aa8.09□□□□□ -1.12
SF3A3-201ENST00000373019 ABCA7Q8IZY2 2146 aa8.09□□□□□ -1.12
SF3A3-201ENST00000373019 NUDT14O95848 222 aa8.08□□□□□ -1.12
SF3A3-201ENST00000373019 CGAP01215 116 aa8.08□□□□□ -1.12
SF3A3-201ENST00000373019 TNFP01375 233 aa8.08□□□□□ -1.12
SF3A3-201ENST00000373019 IGLV3-21P80748 117 aaPredicted RBP8.08□□□□□ -1.12
SF3A3-201ENST00000373019 EBLN2Q6P2I7 272 aa8.08□□□□□ -1.12
SF3A3-201ENST00000373019 C19orf35Q6ZS72 473 aa8.08□□□□□ -1.12
SF3A3-201ENST00000373019 PRR22Q8IZ63 422 aa8.08□□□□□ -1.12
SF3A3-201ENST00000373019 TSTD1Q8NFU3 115 aa8.08□□□□□ -1.12
SF3A3-201ENST00000373019 OR10G9Q8NGN4 311 aa8.08□□□□□ -1.12
SF3A3-201ENST00000373019 OR10G7Q8NGN6 311 aa8.08□□□□□ -1.12
SF3A3-201ENST00000373019 SELENOKQ9Y6D0 94 aa8.08□□□□□ -1.12
SF3A3-201ENST00000373019 R4GN57 208 aa8.08□□□□□ -1.12
SF3A3-201ENST00000373019 TRAV9-1A0A075B6T8 112 aa8.08□□□□□ -1.12
SF3A3-201ENST00000373019 NPIPA5E9PKD4 350 aa8.08□□□□□ -1.12
SF3A3-201ENST00000373019 RAB29O14966 203 aa8.08□□□□□ -1.12
SF3A3-201ENST00000373019 OTX1P32242 354 aaPredicted RBP8.08□□□□□ -1.12
SF3A3-201ENST00000373019 GPR6P46095 362 aaPredicted RBP8.08□□□□□ -1.12
SF3A3-201ENST00000373019 RHOBP62745 196 aa8.08□□□□□ -1.12
SF3A3-201ENST00000373019 PIGYQ3MUY2 71 aa8.08□□□□□ -1.12
SF3A3-201ENST00000373019 ZNF324BQ6AW86 544 aaPredicted RBP8.08□□□□□ -1.12
SF3A3-201ENST00000373019 OR5D13Q8NGL4 314 aa8.08□□□□□ -1.12
SF3A3-201ENST00000373019 OR2Y1Q8NGV0 311 aa8.08□□□□□ -1.12
SF3A3-201ENST00000373019 GNB1LQ9BYB4 327 aa8.08□□□□□ -1.12
SF3A3-201ENST00000373019 HES4Q9HCC6 221 aa8.08□□□□□ -1.12
SF3A3-201ENST00000373019 PSENENQ9NZ42 101 aa8.08□□□□□ -1.12
SF3A3-201ENST00000373019 NPIPA1Q9UND3 350 aa8.08□□□□□ -1.12
SF3A3-201ENST00000373019 IGKV1-27A0A075B6S5 117 aa8.08□□□□□ -1.12
SF3A3-201ENST00000373019 MDFIC2A0A1B0GVS7 189 aa8.08□□□□□ -1.12
SF3A3-201ENST00000373019 K7EN84 100 aa8.08□□□□□ -1.12
SF3A3-201ENST00000373019 PMP22Q01453 160 aa8.08□□□□□ -1.12
SF3A3-201ENST00000373019 PDCD1Q15116 288 aa8.08□□□□□ -1.12
SF3A3-201ENST00000373019 ADIPOR1Q96A54 375 aa8.08□□□□□ -1.12
SF3A3-201ENST00000373019 APOBEC3DQ96AK3 386 aaPredicted RBP8.08□□□□□ -1.12
SF3A3-201ENST00000373019 PLSCR4Q9NRQ2 329 aa8.08□□□□□ -1.12
SF3A3-201ENST00000373019 TIMM9Q9Y5J7 89 aa8.08□□□□□ -1.12
SF3A3-201ENST00000373019 MUC22E2RYF6 1773 aaPredicted RBP8.07□□□□□ -1.12
SF3A3-201ENST00000373019 NOTCH4Q99466 2003 aa8.07□□□□□ -1.12
SF3A3-201ENST00000373019 DEGS1O15121 323 aa8.07□□□□□ -1.12
SF3A3-201ENST00000373019 SYNGR2O43760 224 aa8.07□□□□□ -1.12
SF3A3-201ENST00000373019 ADH1BP00325 375 aa8.07□□□□□ -1.12
SF3A3-201ENST00000373019 HNRNPA2B1P22626 353 aaKnown RBP8.07□□□□□ -1.12
SF3A3-201ENST00000373019 CXCL12P48061 93 aa8.07□□□□□ -1.12
SF3A3-201ENST00000373019 DAZAP2Q15038 168 aaPredicted RBP8.07□□□□□ -1.12
SF3A3-201ENST00000373019 HIST3H3Q16695 136 aa8.07□□□□□ -1.12
SF3A3-201ENST00000373019 NEGR1Q7Z3B1 354 aa8.07□□□□□ -1.12
SF3A3-201ENST00000373019 OR10P1Q8NGE3 313 aa8.07□□□□□ -1.12
SF3A3-201ENST00000373019 OR1K1Q8NGR3 316 aa8.07□□□□□ -1.12
SF3A3-201ENST00000373019 SLC17A4Q9Y2C5 497 aa8.07□□□□□ -1.12
SF3A3-201ENST00000373019 AHCTF1Q8WYP5 2266 aa8.07□□□□□ -1.12
SF3A3-201ENST00000373019 OTOL1A6NHN0 477 aaPredicted RBP8.07□□□□□ -1.12
SF3A3-201ENST00000373019 SIRPB1O00241 398 aa8.07□□□□□ -1.12
SF3A3-201ENST00000373019 PDE6DO43924 150 aa8.07□□□□□ -1.12
SF3A3-201ENST00000373019 CD38P28907 300 aa8.07□□□□□ -1.12
SF3A3-201ENST00000373019 IL12BP29460 328 aa8.07□□□□□ -1.12
SF3A3-201ENST00000373019 MYBPHQ13203 477 aa8.07□□□□□ -1.12
SF3A3-201ENST00000373019 KIR2DS3Q14952 304 aa8.07□□□□□ -1.12
SF3A3-201ENST00000373019 TBR1Q16650 682 aa8.07□□□□□ -1.12
SF3A3-201ENST00000373019 DGAT2Q96PD7 388 aa8.07□□□□□ -1.12
SF3A3-201ENST00000373019 QTRT1Q9BXR0 403 aaKnown RBP8.07□□□□□ -1.12
SF3A3-201ENST00000373019 SLC22A20A6NK97 555 aa8.07□□□□□ -1.12
SF3A3-201ENST00000373019 CD5LO43866 347 aa8.07□□□□□ -1.12
SF3A3-201ENST00000373019 MSR1P21757 451 aa8.07□□□□□ -1.12
SF3A3-201ENST00000373019 DRD3P35462 400 aa8.07□□□□□ -1.12
SF3A3-201ENST00000373019 DAP3P51398 398 aaKnown RBP8.07□□□□□ -1.12
SF3A3-201ENST00000373019 SELENOVP59797 346 aa8.07□□□□□ -1.12
SF3A3-201ENST00000373019 HBG1P69891 147 aa8.07□□□□□ -1.12
SF3A3-201ENST00000373019 HBG2P69892 147 aa8.07□□□□□ -1.12
SF3A3-201ENST00000373019 MRPS21P82921 87 aaKnown RBP8.07□□□□□ -1.12
SF3A3-201ENST00000373019 CCDC3Q9BQI4 270 aa8.07□□□□□ -1.12
SF3A3-201ENST00000373019 LRRC61Q9BV99 259 aa8.07□□□□□ -1.12
SF3A3-201ENST00000373019 GP6Q9HCN6 339 aa8.07□□□□□ -1.12
SF3A3-201ENST00000373019 NPVFQ9HCQ7 196 aa8.07□□□□□ -1.12
SF3A3-201ENST00000373019 CCL28Q9NRJ3 127 aa8.07□□□□□ -1.12
SF3A3-201ENST00000373019 TMEM38BQ9NVV0 291 aa8.07□□□□□ -1.12
SF3A3-201ENST00000373019 GP1BBP13224 206 aa8.06□□□□□ -1.12
SF3A3-201ENST00000373019 NTSR1P30989 418 aa8.06□□□□□ -1.12
SF3A3-201ENST00000373019 TMEM95Q3KNT9 176 aa8.06□□□□□ -1.12
SF3A3-201ENST00000373019 Q56UQ5 140 aa8.06□□□□□ -1.12
SF3A3-201ENST00000373019 FAM58AQ8N1B3 248 aa8.06□□□□□ -1.12
SF3A3-201ENST00000373019 OR10G6Q8NH81 332 aa8.06□□□□□ -1.12
SF3A3-201ENST00000373019 BORCS7Q96B45 105 aa8.06□□□□□ -1.12
SF3A3-201ENST00000373019 GPR27Q9NS67 375 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms