RNA–Protein interactions for RNA: ENST00000372899.5

UBR2-201, Transcript of ubiquitin protein ligase E3 component n-recognin 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene UBR2, Length 7,857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR2-201ENST00000372899 TGFAP01135 160 aa12.46□□□□□ -0.42
UBR2-201ENST00000372899 CISD3P0C7P0 127 aa12.46□□□□□ -0.42
UBR2-201ENST00000372899 APOBEC3AP31941 199 aaPredicted RBP12.46□□□□□ -0.42
UBR2-201ENST00000372899 OR9G4Q8NGQ1 327 aa12.46□□□□□ -0.42
UBR2-201ENST00000372899 MYEOVQ96EZ4 313 aa12.46□□□□□ -0.42
UBR2-201ENST00000372899 SPAG8Q99932 426 aaPredicted RBP12.46□□□□□ -0.42
UBR2-201ENST00000372899 ASB1Q9Y576 335 aa12.46□□□□□ -0.42
UBR2-201ENST00000372899 MAP1BP46821 2468 aaKnown RBP12.45□□□□□ -0.42
UBR2-201ENST00000372899 SYNGR3O43761 229 aa12.45□□□□□ -0.42
UBR2-201ENST00000372899 IGLV3-25P01717 112 aa12.45□□□□□ -0.42
UBR2-201ENST00000372899 LINC01560Q8TB33 94 aa12.45□□□□□ -0.42
UBR2-201ENST00000372899 F5P12259 2224 aa12.45□□□□□ -0.42
UBR2-201ENST00000372899 QTRT1Q9BXR0 403 aaKnown RBP12.45□□□□□ -0.42
UBR2-201ENST00000372899 IGHV1-45A0A0A0MS14 117 aa12.45□□□□□ -0.42
UBR2-201ENST00000372899 TRAV20A0A0B4J274 112 aa12.45□□□□□ -0.42
UBR2-201ENST00000372899 TMEM136Q6ZRR5 245 aa12.45□□□□□ -0.42
UBR2-201ENST00000372899 LINC01555Q8NAE3 123 aa12.45□□□□□ -0.42
UBR2-201ENST00000372899 NRIP2Q9BQI9 281 aa12.45□□□□□ -0.42
UBR2-201ENST00000372899 ZNF430Q9H8G1 570 aaPredicted RBP12.45□□□□□ -0.42
UBR2-201ENST00000372899 MPV17P39210 176 aa12.45□□□□□ -0.42
UBR2-201ENST00000372899 IBA57Q5T440 356 aaKnown RBP12.45□□□□□ -0.42
UBR2-201ENST00000372899 TLNRD1Q9H1K6 362 aa12.45□□□□□ -0.42
UBR2-201ENST00000372899 NHSQ6T4R5 1651 aa12.45□□□□□ -0.42
UBR2-201ENST00000372899 LINC00299Q6ZSB3 139 aa12.45□□□□□ -0.42
UBR2-201ENST00000372899 SP9P0CG40 484 aa12.45□□□□□ -0.42
UBR2-201ENST00000372899 RND2P52198 227 aa12.45□□□□□ -0.42
UBR2-201ENST00000372899 CBLN3Q6UW01 205 aa12.45□□□□□ -0.42
UBR2-201ENST00000372899 LINC00470Q9BZP3 86 aa12.45□□□□□ -0.42
UBR2-201ENST00000372899 TMEM74BQ9NUR3 256 aa12.45□□□□□ -0.42
UBR2-201ENST00000372899 PROB1E7EW31 1015 aa12.44□□□□□ -0.42
UBR2-201ENST00000372899 NTN1O95631 604 aa12.44□□□□□ -0.42
UBR2-201ENST00000372899 SURF2Q15527 256 aaPredicted RBP12.44□□□□□ -0.42
UBR2-201ENST00000372899 CYB5R1Q9UHQ9 305 aa12.44□□□□□ -0.42
UBR2-201ENST00000372899 PKD1L3Q7Z443 1732 aa12.44□□□□□ -0.42
UBR2-201ENST00000372899 ZNF415Q09FC8 603 aa12.44□□□□□ -0.42
UBR2-201ENST00000372899 TMEM170BQ5T4T1 132 aa12.44□□□□□ -0.42
UBR2-201ENST00000372899 LNP1A1A4G5 178 aa12.44□□□□□ -0.42
UBR2-201ENST00000372899 PNKDQ8N490 385 aa12.44□□□□□ -0.42
UBR2-201ENST00000372899 SEC16AO15027 2179 aa12.44□□□□□ -0.42
UBR2-201ENST00000372899 NKX2-6A6NCS4 301 aa12.44□□□□□ -0.42
UBR2-201ENST00000372899 CEACAM21Q3KPI0 293 aa12.44□□□□□ -0.42
UBR2-201ENST00000372899 HKR1P10072 659 aa12.44□□□□□ -0.42
UBR2-201ENST00000372899 NOVP48745 357 aa12.44□□□□□ -0.42
UBR2-201ENST00000372899 EFNB2P52799 333 aa12.44□□□□□ -0.42
UBR2-201ENST00000372899 NEU4Q8WWR8 484 aaPredicted RBP12.44□□□□□ -0.42
UBR2-201ENST00000372899 RREB1Q92766 1687 aa12.44□□□□□ -0.42
UBR2-201ENST00000372899 MESTQ5EB52 335 aa12.44□□□□□ -0.42
UBR2-201ENST00000372899 TMEM42Q69YG0 159 aa12.44□□□□□ -0.42
UBR2-201ENST00000372899 ADAD2Q8NCV1 583 aaKnown RBP12.44□□□□□ -0.42
UBR2-201ENST00000372899 FRRS1LQ9P0K9 344 aa12.44□□□□□ -0.42
UBR2-201ENST00000372899 DSPPQ9NZW4 1301 aa12.44□□□□□ -0.42
UBR2-201ENST00000372899 DOCK7Q96N67 2140 aa12.44□□□□□ -0.42
UBR2-201ENST00000372899 C7orf66A4D0T2 115 aa12.43□□□□□ -0.42
UBR2-201ENST00000372899 PITX3O75364 302 aa12.43□□□□□ -0.42
UBR2-201ENST00000372899 ST3GAL2Q16842 350 aa12.43□□□□□ -0.42
UBR2-201ENST00000372899 ZNF324BQ6AW86 544 aaPredicted RBP12.43□□□□□ -0.42
UBR2-201ENST00000372899 TMEM45BQ96B21 275 aa12.43□□□□□ -0.42
UBR2-201ENST00000372899 SDF2L1Q9HCN8 221 aa12.43□□□□□ -0.42
UBR2-201ENST00000372899 CDS2O95674 445 aa12.43□□□□□ -0.42
UBR2-201ENST00000372899 PLP1P60201 277 aa12.43□□□□□ -0.42
UBR2-201ENST00000372899 LDLRAD2Q5SZI1 272 aa12.43□□□□□ -0.42
UBR2-201ENST00000372899 SLC6A13Q9NSD5 602 aa12.43□□□□□ -0.42
UBR2-201ENST00000372899 PRR13Q9NZ81 148 aa12.43□□□□□ -0.42
UBR2-201ENST00000372899 C12orf73Q69YU5 71 aa12.43□□□□□ -0.42
UBR2-201ENST00000372899 C7orf69Q9H7B7 122 aa12.43□□□□□ -0.42
UBR2-201ENST00000372899 TMEM250H0YL14 139 aa12.43□□□□□ -0.42
UBR2-201ENST00000372899 TMEM177Q53S58 311 aa12.43□□□□□ -0.42
UBR2-201ENST00000372899 TPRX1Q8N7U7 411 aa12.43□□□□□ -0.42
UBR2-201ENST00000372899 RCC2Q9P258 522 aaKnown RBP12.43□□□□□ -0.42
UBR2-201ENST00000372899 SEMA5BQ9P283 1151 aa12.43□□□□□ -0.42
UBR2-201ENST00000372899 IGHV3-66A0A0C4DH42 116 aa12.43□□□□□ -0.42
UBR2-201ENST00000372899 FOXI3A8MTJ6 420 aaPredicted RBP12.43□□□□□ -0.42
UBR2-201ENST00000372899 HOXA6P31267 233 aa12.43□□□□□ -0.42
UBR2-201ENST00000372899 LTBRP36941 435 aa12.43□□□□□ -0.42
UBR2-201ENST00000372899 CADM3Q8N126 398 aa12.43□□□□□ -0.42
UBR2-201ENST00000372899 RNASE4P34096 147 aaKnown RBP12.43□□□□□ -0.42
UBR2-201ENST00000372899 OR4D5Q8NGN0 318 aa12.43□□□□□ -0.42
UBR2-201ENST00000372899 HDHD3Q9BSH5 251 aaPredicted RBP12.42□□□□□ -0.42
UBR2-201ENST00000372899 PLXNA1Q9UIW2 1896 aa12.42□□□□□ -0.42
UBR2-201ENST00000372899 CD33P20138 364 aa12.42□□□□□ -0.42
UBR2-201ENST00000372899 EWSR1Q01844 656 aaKnown RBP eCLIP12.42□□□□□ -0.42
UBR2-201ENST00000372899 AURKAIP1Q9NWT8 199 aaPredicted RBP12.42□□□□□ -0.42
UBR2-201ENST00000372899 IGHV3-23P01764 117 aa12.42□□□□□ -0.42
UBR2-201ENST00000372899 C8orf46Q8TAG6 207 aa12.42□□□□□ -0.42
UBR2-201ENST00000372899 RBM11P57052 281 aaKnown RBP12.42□□□□□ -0.42
UBR2-201ENST00000372899 LRRC3BQ96PB8 259 aa12.42□□□□□ -0.42
UBR2-201ENST00000372899 CHST5Q9GZS9 411 aa12.42□□□□□ -0.42
UBR2-201ENST00000372899 TCRBV5S2A0A599 114 aa12.42□□□□□ -0.42
UBR2-201ENST00000372899 ABLIM2Q6H8Q1 611 aa12.42□□□□□ -0.42
UBR2-201ENST00000372899 SRSF12Q8WXF0 261 aaKnown RBP12.42□□□□□ -0.42
UBR2-201ENST00000372899 DRD3P35462 400 aa12.41□□□□□ -0.42
UBR2-201ENST00000372899 COX14Q96I36 57 aa12.41□□□□□ -0.42
UBR2-201ENST00000372899 SEC11BP0C7V7 166 aa12.41□□□□□ -0.42
UBR2-201ENST00000372899 ASIPP42127 132 aa12.41□□□□□ -0.42
UBR2-201ENST00000372899 DNAJC4Q9NNZ3 241 aa12.41□□□□□ -0.42
UBR2-201ENST00000372899 ST6GALNAC2Q9UJ37 374 aa12.41□□□□□ -0.42
UBR2-201ENST00000372899 KCNE5Q9UJ90 142 aa12.41□□□□□ -0.42
UBR2-201ENST00000372899 F11RQ9Y624 299 aaKnown RBP12.41□□□□□ -0.42
UBR2-201ENST00000372899 TRBV20OR9-2A0A075B6H5 130 aa12.41□□□□□ -0.42
UBR2-201ENST00000372899 A0A087X0M5 115 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms