RNA–Protein interactions for RNA: ENST00000372396.3

KDM4A-201, Transcript of lysine demethylase 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM4A, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4A-201ENST00000372396 AQP3Q92482 292 aa8.6□□□□□ -1.03
KDM4A-201ENST00000372396 TMEM14DPA8MWL7 114 aa8.6□□□□□ -1.03
KDM4A-201ENST00000372396 FAM157AC9JC47 383 aa8.6□□□□□ -1.03
KDM4A-201ENST00000372396 J3KRW8 73 aa8.6□□□□□ -1.03
KDM4A-201ENST00000372396 K7EQM0 130 aa8.6□□□□□ -1.03
KDM4A-201ENST00000372396 TUSC2O75896 110 aa8.6□□□□□ -1.03
KDM4A-201ENST00000372396 PMCHP20382 165 aa8.6□□□□□ -1.03
KDM4A-201ENST00000372396 AMTP48728 403 aa8.6□□□□□ -1.03
KDM4A-201ENST00000372396 STUMQ69YW2 141 aa8.6□□□□□ -1.03
KDM4A-201ENST00000372396 KLK13Q9UKR3 277 aa8.6□□□□□ -1.03
KDM4A-201ENST00000372396 ALPK2Q86TB3 2170 aa8.59□□□□□ -1.03
KDM4A-201ENST00000372396 DUXBA0A1W2PPF3 345 aa8.59□□□□□ -1.03
KDM4A-201ENST00000372396 PINLYPA6NC86 204 aa8.59□□□□□ -1.03
KDM4A-201ENST00000372396 TNFRSF1AP19438 455 aa8.59□□□□□ -1.03
KDM4A-201ENST00000372396 RAB9AP51151 201 aa8.59□□□□□ -1.03
KDM4A-201ENST00000372396 GGNQ86UU5 652 aa8.59□□□□□ -1.03
KDM4A-201ENST00000372396 OR2Z1Q8NG97 314 aa8.59□□□□□ -1.03
KDM4A-201ENST00000372396 SLC25A40Q8TBP6 338 aa8.59□□□□□ -1.03
KDM4A-201ENST00000372396 IGKV3D-15A0A087WSY6 115 aa8.59□□□□□ -1.03
KDM4A-201ENST00000372396 FAM90A10PA6NDY2 464 aa8.59□□□□□ -1.03
KDM4A-201ENST00000372396 FAM90A18PA6NE21 464 aa8.59□□□□□ -1.03
KDM4A-201ENST00000372396 FAM90A16PA6NEW6 464 aa8.59□□□□□ -1.03
KDM4A-201ENST00000372396 FAM90A20PA6NIJ5 464 aa8.59□□□□□ -1.03
KDM4A-201ENST00000372396 FAM90A8PA6NJQ4 464 aa8.59□□□□□ -1.03
KDM4A-201ENST00000372396 FAM90A7PA6NKC0 464 aa8.59□□□□□ -1.03
KDM4A-201ENST00000372396 FAM90A22PA8MWA6 464 aa8.59□□□□□ -1.03
KDM4A-201ENST00000372396 FAM90A12PA8MX19 464 aa8.59□□□□□ -1.03
KDM4A-201ENST00000372396 FAM90A5PA8MXJ8 464 aa8.59□□□□□ -1.03
KDM4A-201ENST00000372396 FAM90A23PA8MXZ1 464 aa8.59□□□□□ -1.03
KDM4A-201ENST00000372396 RBFOX2O43251 390 aaKnown RBP eCLIP8.59□□□□□ -1.033e-8■■■■■ 28.7
KDM4A-201ENST00000372396 FAM90A15PP0C7V4 464 aa8.59□□□□□ -1.03
KDM4A-201ENST00000372396 FAM90A13PP0C7W8 464 aa8.59□□□□□ -1.03
KDM4A-201ENST00000372396 FAM90A14PP0C7W9 464 aa8.59□□□□□ -1.03
KDM4A-201ENST00000372396 FAM90A24PP0C7X0 464 aa8.59□□□□□ -1.03
KDM4A-201ENST00000372396 GZMHP20718 246 aa8.59□□□□□ -1.03
KDM4A-201ENST00000372396 PHYHD1Q5SRE7 291 aa8.59□□□□□ -1.03
KDM4A-201ENST00000372396 RCL1Q9Y2P8 373 aaKnown RBP8.59□□□□□ -1.03
KDM4A-201ENST00000372396 MAP1BP46821 2468 aaKnown RBP8.59□□□□□ -1.03
KDM4A-201ENST00000372396 IGHV3-64DA0A0J9YX35 117 aa8.59□□□□□ -1.03
KDM4A-201ENST00000372396 CTSDP07339 412 aaPredicted RBP8.59□□□□□ -1.03
KDM4A-201ENST00000372396 BCL3P20749 454 aa8.59□□□□□ -1.03
KDM4A-201ENST00000372396 NTF3P20783 257 aa8.59□□□□□ -1.03
KDM4A-201ENST00000372396 CCL1P22362 96 aa8.59□□□□□ -1.03
KDM4A-201ENST00000372396 VAX1Q5SQQ9 334 aa8.59□□□□□ -1.03
KDM4A-201ENST00000372396 PAQR4Q8N4S7 273 aaPredicted RBP8.59□□□□□ -1.03
KDM4A-201ENST00000372396 SH3BGRL3Q9H299 93 aa8.59□□□□□ -1.03
KDM4A-201ENST00000372396 MANBALQ9NQG1 85 aa8.59□□□□□ -1.03
KDM4A-201ENST00000372396 LIN7CQ9NUP9 197 aaKnown RBP8.59□□□□□ -1.03
KDM4A-201ENST00000372396 TAAR3PQ9P1P4 343 aa8.59□□□□□ -1.03
KDM4A-201ENST00000372396 SLC45A2Q9UMX9 530 aa8.59□□□□□ -1.03
KDM4A-201ENST00000372396 A0A1B0GU03 582 aa8.58□□□□□ -1.04
KDM4A-201ENST00000372396 A0A1B0GW64 132 aa8.58□□□□□ -1.04
KDM4A-201ENST00000372396 GFRA3O60609 400 aa8.58□□□□□ -1.04
KDM4A-201ENST00000372396 ASCL1P50553 236 aa8.58□□□□□ -1.04
KDM4A-201ENST00000372396 RBM11P57052 281 aaKnown RBP8.58□□□□□ -1.04
KDM4A-201ENST00000372396 HTD2P86397 168 aa8.58□□□□□ -1.04
KDM4A-201ENST00000372396 TESK1Q15569 626 aa8.58□□□□□ -1.04
KDM4A-201ENST00000372396 FAM78BQ5VT40 261 aa8.58□□□□□ -1.04
KDM4A-201ENST00000372396 AMMECR1LQ6DCA0 310 aa8.58□□□□□ -1.04
KDM4A-201ENST00000372396 TRAT1Q6PIZ9 186 aa8.58□□□□□ -1.04
KDM4A-201ENST00000372396 ZIC4Q8N9L1 334 aa8.58□□□□□ -1.04
KDM4A-201ENST00000372396 ANAPC16Q96DE5 110 aa8.58□□□□□ -1.04
KDM4A-201ENST00000372396 WDYHV1Q96HA8 205 aa8.58□□□□□ -1.04
KDM4A-201ENST00000372396 TMEM56Q96MV1 263 aa8.58□□□□□ -1.04
KDM4A-201ENST00000372396 PLSCR4Q9NRQ2 329 aa8.58□□□□□ -1.04
KDM4A-201ENST00000372396 TMEM56-RWDD3S4R434 201 aa8.58□□□□□ -1.04
KDM4A-201ENST00000372396 NCOR1O75376 2440 aa8.58□□□□□ -1.04
KDM4A-201ENST00000372396 MSTNO14793 375 aa8.58□□□□□ -1.04
KDM4A-201ENST00000372396 PDE6DO43924 150 aa8.58□□□□□ -1.04
KDM4A-201ENST00000372396 CDS2O95674 445 aa8.58□□□□□ -1.04
KDM4A-201ENST00000372396 GFRA1P56159 465 aa8.58□□□□□ -1.04
KDM4A-201ENST00000372396 PDCD1Q15116 288 aa8.58□□□□□ -1.04
KDM4A-201ENST00000372396 LTC4SQ16873 150 aa8.58□□□□□ -1.04
KDM4A-201ENST00000372396 ZNF506Q5JVG8 444 aa8.58□□□□□ -1.04
KDM4A-201ENST00000372396 TMEM144Q7Z5S9 345 aa8.58□□□□□ -1.04
KDM4A-201ENST00000372396 SAXO1Q8IYX7 474 aa8.58□□□□□ -1.04
KDM4A-201ENST00000372396 OR1N2Q8NGR9 330 aa8.58□□□□□ -1.04
KDM4A-201ENST00000372396 CITED1Q99966 193 aa8.58□□□□□ -1.04
KDM4A-201ENST00000372396 DERL1Q9BUN8 251 aa8.58□□□□□ -1.04
KDM4A-201ENST00000372396 USF1P22415 310 aaPredicted RBP8.58□□□□□ -1.04
KDM4A-201ENST00000372396 NKX2-1P43699 371 aaPredicted RBP8.58□□□□□ -1.04
KDM4A-201ENST00000372396 TMPRSS3P57727 454 aa8.58□□□□□ -1.04
KDM4A-201ENST00000372396 IL13RA2Q14627 380 aa8.58□□□□□ -1.04
KDM4A-201ENST00000372396 TMEM217Q8N7C4 229 aa8.58□□□□□ -1.04
KDM4A-201ENST00000372396 GALMQ96C23 342 aa8.58□□□□□ -1.04
KDM4A-201ENST00000372396 GTSF1LQ9H1H1 148 aa8.58□□□□□ -1.04
KDM4A-201ENST00000372396 RPS20P60866 119 aaKnown RBP8.58□□□□□ -1.04
KDM4A-201ENST00000372396 Q6ZT83 130 aa8.58□□□□□ -1.04
KDM4A-201ENST00000372396 Q6ZVH6 145 aa8.58□□□□□ -1.04
KDM4A-201ENST00000372396 OR51H1Q8NH63 302 aa8.58□□□□□ -1.04
KDM4A-201ENST00000372396 CHRDL1Q9BU40 450 aa8.58□□□□□ -1.04
KDM4A-201ENST00000372396 PEF1Q9UBV8 284 aaKnown RBP8.58□□□□□ -1.04
KDM4A-201ENST00000372396 AGFG2O95081 481 aa8.57□□□□□ -1.04
KDM4A-201ENST00000372396 ESDP10768 282 aa8.57□□□□□ -1.04
KDM4A-201ENST00000372396 PSMB3P49720 205 aa8.57□□□□□ -1.04
KDM4A-201ENST00000372396 B3GALT5-AS1P59052 145 aa8.57□□□□□ -1.04
KDM4A-201ENST00000372396 RND1Q92730 232 aa8.57□□□□□ -1.04
KDM4A-201ENST00000372396 MAGT1Q9H0U3 335 aa8.57□□□□□ -1.04
KDM4A-201ENST00000372396 GPR179Q6PRD1 2367 aa8.57□□□□□ -1.04
KDM4A-201ENST00000372396 SPRY3O43610 288 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms