RNA–Protein interactions for RNA: ENST00000372216.8

COL4A6-202, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-202ENST00000372216 DNLZQ5SXM8 178 aa8.41□□□□□ -1.06
COL4A6-202ENST00000372216 SIGIRRQ6IA17 410 aa8.41□□□□□ -1.06
COL4A6-202ENST00000372216 LYZL2Q7Z4W2 148 aa8.41□□□□□ -1.06
COL4A6-202ENST00000372216 MRPS18AQ9NVS2 196 aaKnown RBP8.41□□□□□ -1.06
COL4A6-202ENST00000372216 IDI2-AS1Q9NZ38 188 aa8.41□□□□□ -1.06
COL4A6-202ENST00000372216 MIXL1Q9H2W2 232 aa8.41□□□□□ -1.06
COL4A6-202ENST00000372216 SIRT4Q9Y6E7 314 aaPredicted RBP8.41□□□□□ -1.06
COL4A6-202ENST00000372216 C17orf51A8MQB3 221 aa8.41□□□□□ -1.06
COL4A6-202ENST00000372216 LMX1BO60663 402 aa8.41□□□□□ -1.06
COL4A6-202ENST00000372216 TGFAP01135 160 aa8.41□□□□□ -1.06
COL4A6-202ENST00000372216 MBPP02686 304 aaPredicted RBP8.41□□□□□ -1.06
COL4A6-202ENST00000372216 MDKP21741 143 aaPredicted RBP8.41□□□□□ -1.06
COL4A6-202ENST00000372216 HIST1H1AQ02539 215 aaPredicted RBP8.41□□□□□ -1.06
COL4A6-202ENST00000372216 C1orf162Q8NEQ5 155 aaPredicted RBP8.41□□□□□ -1.06
COL4A6-202ENST00000372216 MARS2Q96GW9 593 aaKnown RBP8.41□□□□□ -1.06
COL4A6-202ENST00000372216 CHRNA10Q9GZZ6 450 aa8.41□□□□□ -1.06
COL4A6-202ENST00000372216 MUC21A0A0G2JKD1 596 aa8.41□□□□□ -1.06
COL4A6-202ENST00000372216 LOC107984156A0A0G2JMH3 177 aa8.41□□□□□ -1.06
COL4A6-202ENST00000372216 MUC21A0A140T8X8 626 aa8.41□□□□□ -1.06
COL4A6-202ENST00000372216 HPRT1P00492 218 aa8.41□□□□□ -1.06
COL4A6-202ENST00000372216 CD74P04233 296 aa8.41□□□□□ -1.06
COL4A6-202ENST00000372216 MUC21Q5SSG8 566 aa8.41□□□□□ -1.06
COL4A6-202ENST00000372216 ARL17AQ8IVW1 177 aa8.41□□□□□ -1.06
COL4A6-202ENST00000372216 SEC11CQ9BY50 192 aa8.41□□□□□ -1.06
COL4A6-202ENST00000372216 WNT5BQ9H1J7 359 aa8.41□□□□□ -1.06
COL4A6-202ENST00000372216 ZNF107Q9UII5 783 aaPredicted RBP8.41□□□□□ -1.06
COL4A6-202ENST00000372216 MPV17P39210 176 aa8.41□□□□□ -1.06
COL4A6-202ENST00000372216 IGSF11Q5DX21 431 aa8.41□□□□□ -1.06
COL4A6-202ENST00000372216 Q9N2K0 584 aa8.41□□□□□ -1.06
COL4A6-202ENST00000372216 CHCHD2Q9Y6H1 151 aaPredicted RBP8.41□□□□□ -1.06
COL4A6-202ENST00000372216 TMEM56-RWDD3S4R434 201 aa8.41□□□□□ -1.06
COL4A6-202ENST00000372216 A0A0G2JMM0 328 aa8.4□□□□□ -1.06
COL4A6-202ENST00000372216 A0A1W2PPB8 328 aa8.4□□□□□ -1.06
COL4A6-202ENST00000372216 A0A1W2PRS3 328 aa8.4□□□□□ -1.06
COL4A6-202ENST00000372216 KIR3DP1A8MWS1 328 aa8.4□□□□□ -1.06
COL4A6-202ENST00000372216 SLC25A17O43808 307 aa8.4□□□□□ -1.06
COL4A6-202ENST00000372216 COTL1Q14019 142 aa8.4□□□□□ -1.06
COL4A6-202ENST00000372216 ZNF645Q8N7E2 425 aa8.4□□□□□ -1.06
COL4A6-202ENST00000372216 GLMPQ8WWB7 406 aa8.4□□□□□ -1.06
COL4A6-202ENST00000372216 F11RQ9Y624 299 aaKnown RBP8.4□□□□□ -1.06
COL4A6-202ENST00000372216 IGKV1D-42A0A075B6H8 117 aa8.4□□□□□ -1.06
COL4A6-202ENST00000372216 A0A1B0GV72 72 aa8.4□□□□□ -1.06
COL4A6-202ENST00000372216 NDUFA2O43678 99 aa8.4□□□□□ -1.06
COL4A6-202ENST00000372216 ZNF253O75346 499 aa8.4□□□□□ -1.06
COL4A6-202ENST00000372216 IGHMP01871 453 aa8.4□□□□□ -1.06
COL4A6-202ENST00000372216 DUX3Q96PT4 197 aa8.4□□□□□ -1.06
COL4A6-202ENST00000372216 MANBALQ9NQG1 85 aa8.4□□□□□ -1.06
COL4A6-202ENST00000372216 TOMM7Q9P0U1 55 aa8.4□□□□□ -1.06
COL4A6-202ENST00000372216 FOXD3Q9UJU5 478 aaPredicted RBP8.4□□□□□ -1.06
COL4A6-202ENST00000372216 DSPPQ9NZW4 1301 aa8.4□□□□□ -1.06
COL4A6-202ENST00000372216 LEUTXA8MZ59 168 aa8.4□□□□□ -1.06
COL4A6-202ENST00000372216 CORTO00230 105 aa8.4□□□□□ -1.06
COL4A6-202ENST00000372216 AQP10Q96PS8 301 aa8.4□□□□□ -1.06
COL4A6-202ENST00000372216 IGHV3-11P01762 117 aa8.4□□□□□ -1.06
COL4A6-202ENST00000372216 ISG15P05161 165 aa8.4□□□□□ -1.06
COL4A6-202ENST00000372216 HIST1H1BP16401 226 aaKnown RBP8.4□□□□□ -1.06
COL4A6-202ENST00000372216 FSTP19883 344 aa8.4□□□□□ -1.06
COL4A6-202ENST00000372216 NRN1LQ496H8 165 aa8.4□□□□□ -1.06
COL4A6-202ENST00000372216 LHFPL5Q8TAF8 219 aa8.4□□□□□ -1.06
COL4A6-202ENST00000372216 A0A1W2PS18 150 aa8.4□□□□□ -1.07
COL4A6-202ENST00000372216 B9A039 149 aa8.4□□□□□ -1.07
COL4A6-202ENST00000372216 NPIPB6E9PJ23 425 aa8.4□□□□□ -1.07
COL4A6-202ENST00000372216 TRGV3P03979 118 aa8.4□□□□□ -1.07
COL4A6-202ENST00000372216 FAM27E3Q08E93 113 aa8.4□□□□□ -1.07
COL4A6-202ENST00000372216 ZNF415Q09FC8 603 aa8.4□□□□□ -1.07
COL4A6-202ENST00000372216 KLF9Q13886 244 aaPredicted RBP8.4□□□□□ -1.07
COL4A6-202ENST00000372216 Q71RC1 249 aaPredicted RBP8.4□□□□□ -1.07
COL4A6-202ENST00000372216 FAM57AQ8TBR7 257 aa8.4□□□□□ -1.07
COL4A6-202ENST00000372216 RCC2Q9P258 522 aaKnown RBP8.4□□□□□ -1.07
COL4A6-202ENST00000372216 SYNGR3O43761 229 aa8.39□□□□□ -1.07
COL4A6-202ENST00000372216 IQCJQ1A5X6 159 aa8.39□□□□□ -1.07
COL4A6-202ENST00000372216 UQCC3Q6UW78 93 aa8.39□□□□□ -1.07
COL4A6-202ENST00000372216 IFITM10A6NMD0 228 aa8.39□□□□□ -1.07
COL4A6-202ENST00000372216 PRR32B1ATL7 298 aa8.39□□□□□ -1.07
COL4A6-202ENST00000372216 CD1AP06126 327 aa8.39□□□□□ -1.07
COL4A6-202ENST00000372216 CRHP06850 196 aa8.39□□□□□ -1.07
COL4A6-202ENST00000372216 RPL27AP46776 148 aaKnown RBP8.39□□□□□ -1.07
COL4A6-202ENST00000372216 SUMO2P61956 95 aaKnown RBP8.39□□□□□ -1.07
COL4A6-202ENST00000372216 TMEM183BQ1AE95 376 aa8.39□□□□□ -1.07
COL4A6-202ENST00000372216 ISOC2Q96AB3 205 aa8.39□□□□□ -1.07
COL4A6-202ENST00000372216 C12orf57Q99622 126 aa8.39□□□□□ -1.07
COL4A6-202ENST00000372216 ELOVL1Q9BW60 279 aa8.39□□□□□ -1.07
COL4A6-202ENST00000372216 FAM206AQ9NX38 181 aa8.39□□□□□ -1.07
COL4A6-202ENST00000372216 AP4M1O00189 453 aa8.39□□□□□ -1.07
COL4A6-202ENST00000372216 GCM2O75603 506 aaPredicted RBP8.39□□□□□ -1.07
COL4A6-202ENST00000372216 AMY1AP04745 511 aa8.39□□□□□ -1.07
COL4A6-202ENST00000372216 SCTP09683 121 aa8.39□□□□□ -1.07
COL4A6-202ENST00000372216 APOBEC3AP31941 199 aaPredicted RBP8.39□□□□□ -1.07
COL4A6-202ENST00000372216 EWSR1Q01844 656 aaKnown RBP eCLIP8.39□□□□□ -1.07
COL4A6-202ENST00000372216 CLLU1Q5K131 121 aa8.39□□□□□ -1.07
COL4A6-202ENST00000372216 ABHD12Q8N2K0 398 aa8.39□□□□□ -1.07
COL4A6-202ENST00000372216 APCDD1LQ8NCL9 501 aa8.39□□□□□ -1.07
COL4A6-202ENST00000372216 MARVELD1Q9BSK0 173 aa8.39□□□□□ -1.07
COL4A6-202ENST00000372216 FUT9Q9Y231 359 aa8.39□□□□□ -1.07
COL4A6-202ENST00000372216 ZNF25P17030 456 aaPredicted RBP8.39□□□□□ -1.07
COL4A6-202ENST00000372216 SRD5A1P18405 259 aa8.39□□□□□ -1.07
COL4A6-202ENST00000372216 RND2P52198 227 aa8.39□□□□□ -1.07
COL4A6-202ENST00000372216 CD69Q07108 199 aa8.39□□□□□ -1.07
COL4A6-202ENST00000372216 NCMAPQ5T1S8 102 aa8.39□□□□□ -1.07
COL4A6-202ENST00000372216 Q6ZT83 130 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms