RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 WSB1Q9Y6I7 421 aa9.81□□□□□ -0.84
PDE6C-201ENST00000371447 ODAMA1E959 279 aa9.81□□□□□ -0.84
PDE6C-201ENST00000371447 TMEM210A6NLX4 147 aa9.81□□□□□ -0.84
PDE6C-201ENST00000371447 S100A9P06702 114 aaKnown RBP9.81□□□□□ -0.84
PDE6C-201ENST00000371447 NDUFB7P17568 137 aa9.81□□□□□ -0.84
PDE6C-201ENST00000371447 P2RY6Q15077 328 aa9.81□□□□□ -0.84
PDE6C-201ENST00000371447 HMGN3Q15651 99 aa9.81□□□□□ -0.84
PDE6C-201ENST00000371447 CLEC12BQ2HXU8 276 aa9.81□□□□□ -0.84
PDE6C-201ENST00000371447 ZNF880Q6PDB4 577 aa9.81□□□□□ -0.84
PDE6C-201ENST00000371447 GCSAMQ8N6F7 178 aa9.81□□□□□ -0.84
PDE6C-201ENST00000371447 RYDENQ9NUL5 291 aaKnown RBP9.81□□□□□ -0.84
PDE6C-201ENST00000371447 CARHSP1Q9Y2V2 147 aaKnown RBP9.81□□□□□ -0.84
PDE6C-201ENST00000371447 SVEP1Q4LDE5 3571 aa9.81□□□□□ -0.84
PDE6C-201ENST00000371447 A0A1B0GV90 55 aa9.81□□□□□ -0.84
PDE6C-201ENST00000371447 RBFOX3A6NFN3 312 aa9.81□□□□□ -0.84
PDE6C-201ENST00000371447 CLDN14O95500 239 aa9.81□□□□□ -0.84
PDE6C-201ENST00000371447 CGAP01215 116 aa9.81□□□□□ -0.84
PDE6C-201ENST00000371447 FAM87AP0C7U9 286 aa9.81□□□□□ -0.84
PDE6C-201ENST00000371447 CEACAM1P13688 526 aa9.81□□□□□ -0.84
PDE6C-201ENST00000371447 GUSBP1Q15486 140 aa9.81□□□□□ -0.84
PDE6C-201ENST00000371447 IGFL2Q6UWQ7 119 aa9.81□□□□□ -0.84
PDE6C-201ENST00000371447 SLC16A13Q7RTY0 426 aa9.81□□□□□ -0.84
PDE6C-201ENST00000371447 FAM216BQ8N7L0 139 aa9.81□□□□□ -0.84
PDE6C-201ENST00000371447 SLC25A22Q9H936 323 aa9.81□□□□□ -0.84
PDE6C-201ENST00000371447 NIT2Q9NQR4 276 aa9.81□□□□□ -0.84
PDE6C-201ENST00000371447 MBNL3Q9NUK0 354 aaKnown RBP9.81□□□□□ -0.84
PDE6C-201ENST00000371447 PRELID3BQ9Y3B1 194 aa9.81□□□□□ -0.84
PDE6C-201ENST00000371447 ANKHD1Q8IWZ3 2542 aaKnown RBP9.8□□□□□ -0.84
PDE6C-201ENST00000371447 SLC31A2O15432 143 aa9.8□□□□□ -0.84
PDE6C-201ENST00000371447 BAXQ07812 192 aa9.8□□□□□ -0.84
PDE6C-201ENST00000371447 ASCL5Q7RTU5 278 aa9.8□□□□□ -0.84
PDE6C-201ENST00000371447 HAPLN4Q86UW8 402 aa9.8□□□□□ -0.84
PDE6C-201ENST00000371447 ZNF645Q8N7E2 425 aa9.8□□□□□ -0.84
PDE6C-201ENST00000371447 TMEM68Q96MH6 324 aa9.8□□□□□ -0.84
PDE6C-201ENST00000371447 SLC35B3Q9H1N7 401 aa9.8□□□□□ -0.84
PDE6C-201ENST00000371447 TMPRSS5Q9H3S3 457 aa9.8□□□□□ -0.84
PDE6C-201ENST00000371447 MKRN2OSH3BPM6 223 aa9.8□□□□□ -0.84
PDE6C-201ENST00000371447 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.8□□□□□ -0.84
PDE6C-201ENST00000371447 MEOX2P50222 304 aa9.8□□□□□ -0.84
PDE6C-201ENST00000371447 SLC38A11Q08AI6 406 aa9.8□□□□□ -0.84
PDE6C-201ENST00000371447 CATR1Q13166 79 aa9.8□□□□□ -0.84
PDE6C-201ENST00000371447 SSX2Q16385 188 aa9.8□□□□□ -0.84
PDE6C-201ENST00000371447 C1orf185Q5T7R7 199 aa9.8□□□□□ -0.84
PDE6C-201ENST00000371447 RAB40CQ96S21 281 aa9.8□□□□□ -0.84
PDE6C-201ENST00000371447 KPTNQ9Y664 436 aa9.8□□□□□ -0.84
PDE6C-201ENST00000371447 TMPRSS2O15393 492 aa9.79□□□□□ -0.84
PDE6C-201ENST00000371447 SELENOVP59797 346 aa9.79□□□□□ -0.84
PDE6C-201ENST00000371447 TNFAIP6P98066 277 aaPredicted RBP9.79□□□□□ -0.84
PDE6C-201ENST00000371447 GFRALQ6UXV0 394 aa9.79□□□□□ -0.84
PDE6C-201ENST00000371447 CSMD1Q96PZ7 3565 aa9.79□□□□□ -0.84
PDE6C-201ENST00000371447 WNK2Q9Y3S1 2297 aa9.79□□□□□ -0.84
PDE6C-201ENST00000371447 PLXNB1O43157 2135 aa9.79□□□□□ -0.84
PDE6C-201ENST00000371447 BSNQ9UPA5 3926 aa9.79□□□□□ -0.84
PDE6C-201ENST00000371447 IFNA10P01566 189 aa9.79□□□□□ -0.84
PDE6C-201ENST00000371447 MYOD1P15172 320 aa9.79□□□□□ -0.84
PDE6C-201ENST00000371447 ZNF134P52741 427 aa9.79□□□□□ -0.84
PDE6C-201ENST00000371447 HFEQ30201 348 aa9.79□□□□□ -0.84
PDE6C-201ENST00000371447 PRAMEF5Q5TYX0 476 aa9.79□□□□□ -0.84
PDE6C-201ENST00000371447 SSX7Q7RTT5 188 aa9.79□□□□□ -0.84
PDE6C-201ENST00000371447 LYG1Q8N1E2 194 aa9.79□□□□□ -0.84
PDE6C-201ENST00000371447 CCL17Q92583 94 aa9.79□□□□□ -0.84
PDE6C-201ENST00000371447 RND1Q92730 232 aa9.79□□□□□ -0.84
PDE6C-201ENST00000371447 ARV1Q9H2C2 271 aa9.79□□□□□ -0.84
PDE6C-201ENST00000371447 STRAPQ9Y3F4 350 aaKnown RBP9.79□□□□□ -0.84
PDE6C-201ENST00000371447 TRBV6-6A0A0A6YYG2 114 aa9.79□□□□□ -0.84
PDE6C-201ENST00000371447 BRWD1-AS2P59051 145 aa9.79□□□□□ -0.84
PDE6C-201ENST00000371447 TAS2R30P59541 319 aa9.79□□□□□ -0.84
PDE6C-201ENST00000371447 RAB2AP61019 212 aa9.79□□□□□ -0.84
PDE6C-201ENST00000371447 TNFRSF9Q07011 255 aa9.79□□□□□ -0.84
PDE6C-201ENST00000371447 ZNF343Q6P1L6 599 aa9.79□□□□□ -0.84
PDE6C-201ENST00000371447 GNPNAT1Q96EK6 184 aaPredicted RBP9.79□□□□□ -0.84
PDE6C-201ENST00000371447 MEGF10Q96KG7 1140 aa9.79□□□□□ -0.84
PDE6C-201ENST00000371447 QTRT1Q9BXR0 403 aaKnown RBP9.79□□□□□ -0.84
PDE6C-201ENST00000371447 C11orf1Q9H5F2 150 aa9.79□□□□□ -0.84
PDE6C-201ENST00000371447 TRAV3A0A0B4J244 114 aa9.78□□□□□ -0.84
PDE6C-201ENST00000371447 NUDT19A8MXV4 375 aa9.78□□□□□ -0.84
PDE6C-201ENST00000371447 TAGLN2P37802 199 aaKnown RBP9.78□□□□□ -0.84
PDE6C-201ENST00000371447 HBG1P69891 147 aa9.78□□□□□ -0.84
PDE6C-201ENST00000371447 HBG2P69892 147 aa9.78□□□□□ -0.84
PDE6C-201ENST00000371447 SRSF7Q16629 238 aaKnown RBP eCLIP9.78□□□□□ -0.84
PDE6C-201ENST00000371447 ZNF787Q6DD87 383 aa9.78□□□□□ -0.84
PDE6C-201ENST00000371447 SLC35E4Q6ICL7 350 aa9.78□□□□□ -0.84
PDE6C-201ENST00000371447 SPSB3Q6PJ21 355 aa9.78□□□□□ -0.84
PDE6C-201ENST00000371447 SVIPQ8NHG7 77 aa9.78□□□□□ -0.84
PDE6C-201ENST00000371447 SMCO4Q9NRQ5 59 aa9.78□□□□□ -0.84
PDE6C-201ENST00000371447 MARCH11A6NNE9 402 aa9.78□□□□□ -0.84
PDE6C-201ENST00000371447 PRRG2O14669 202 aa9.78□□□□□ -0.84
PDE6C-201ENST00000371447 DFFBO76075 338 aa9.78□□□□□ -0.84
PDE6C-201ENST00000371447 REG1BP48304 166 aa9.78□□□□□ -0.84
PDE6C-201ENST00000371447 TFF3Q07654 80 aa9.78□□□□□ -0.84
PDE6C-201ENST00000371447 AVPI1Q5T686 147 aa9.78□□□□□ -0.84
PDE6C-201ENST00000371447 Q6ZS92 163 aa9.78□□□□□ -0.84
PDE6C-201ENST00000371447 DTD1Q8TEA8 209 aa9.78□□□□□ -0.84
PDE6C-201ENST00000371447 SCNM1Q9BWG6 230 aa9.78□□□□□ -0.84
PDE6C-201ENST00000371447 MBD3L4A6NDZ8 208 aaPredicted RBP9.77□□□□□ -0.84
PDE6C-201ENST00000371447 MBD3L3A6NE82 208 aaPredicted RBP9.77□□□□□ -0.84
PDE6C-201ENST00000371447 MBD3L5A6NJ08 208 aaPredicted RBP9.77□□□□□ -0.84
PDE6C-201ENST00000371447 RNF212BA8MTL3 300 aa9.77□□□□□ -0.84
PDE6C-201ENST00000371447 FAM157AC9JC47 383 aa9.77□□□□□ -0.84
PDE6C-201ENST00000371447 IGLV1-44P01699 117 aa9.77□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms