RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 DIRC2Q96SL1 478 aa10.84□□□□□ -0.67
HCFC1-202ENST00000369984 NPFFR1Q9GZQ6 430 aa10.84□□□□□ -0.67
HCFC1-202ENST00000369984 MAP1LC3AQ9H492 121 aa10.84□□□□□ -0.67
HCFC1-202ENST00000369984 GPR35Q9HC97 309 aa10.84□□□□□ -0.67
HCFC1-202ENST00000369984 LEPROTL1O95214 131 aa10.84□□□□□ -0.67
HCFC1-202ENST00000369984 RPL31P62899 125 aaKnown RBP10.84□□□□□ -0.67
HCFC1-202ENST00000369984 CCDC144NLQ6NUI1 221 aa10.84□□□□□ -0.67
HCFC1-202ENST00000369984 SLC25A34Q6PIV7 304 aa10.84□□□□□ -0.67
HCFC1-202ENST00000369984 OR1P1Q8NH06 330 aa10.84□□□□□ -0.67
HCFC1-202ENST00000369984 OR10AG1Q8NH19 301 aa10.84□□□□□ -0.67
HCFC1-202ENST00000369984 NEU1Q99519 415 aa10.84□□□□□ -0.67
HCFC1-202ENST00000369984 HSPB7Q9UBY9 170 aa10.84□□□□□ -0.67
HCFC1-202ENST00000369984 COL6A6A6NMZ7 2263 aa10.84□□□□□ -0.67
HCFC1-202ENST00000369984 TYMSP04818 313 aa10.84□□□□□ -0.67
HCFC1-202ENST00000369984 TRIP6Q15654 476 aaKnown RBP10.84□□□□□ -0.67
HCFC1-202ENST00000369984 LURAP1LQ8IV03 231 aa10.84□□□□□ -0.67
HCFC1-202ENST00000369984 RTN4RQ9BZR6 473 aa10.84□□□□□ -0.67
HCFC1-202ENST00000369984 A0A1B0GWB2 263 aa10.84□□□□□ -0.67
HCFC1-202ENST00000369984 FCGR2BP31994 310 aaPredicted RBP10.84□□□□□ -0.67
HCFC1-202ENST00000369984 A0A1W2PQD3 144 aa10.83□□□□□ -0.67
HCFC1-202ENST00000369984 TNFSF10P50591 281 aa10.83□□□□□ -0.67
HCFC1-202ENST00000369984 SRSF5Q13243 272 aaKnown RBP10.83□□□□□ -0.67
HCFC1-202ENST00000369984 PEF1Q9UBV8 284 aaKnown RBP10.83□□□□□ -0.67
HCFC1-202ENST00000369984 GFRA1P56159 465 aa10.83□□□□□ -0.68
HCFC1-202ENST00000369984 C1orf210Q8IVY1 113 aa10.83□□□□□ -0.68
HCFC1-202ENST00000369984 OR2Y1Q8NGV0 311 aa10.83□□□□□ -0.68
HCFC1-202ENST00000369984 NIT1Q86X76 327 aa10.83□□□□□ -0.68
HCFC1-202ENST00000369984 NTN1O95631 604 aa10.83□□□□□ -0.68
HCFC1-202ENST00000369984 C1QL3Q5VWW1 255 aa10.83□□□□□ -0.68
HCFC1-202ENST00000369984 LPAR2Q9HBW0 351 aa10.83□□□□□ -0.68
HCFC1-202ENST00000369984 IGKV3OR2-268A0A0C4DH90 116 aa10.83□□□□□ -0.68
HCFC1-202ENST00000369984 FLRT3Q9NZU0 649 aa10.83□□□□□ -0.68
HCFC1-202ENST00000369984 CXCL10P02778 98 aa10.83□□□□□ -0.68
HCFC1-202ENST00000369984 CTGFP29279 349 aa10.83□□□□□ -0.68
HCFC1-202ENST00000369984 NAAAQ02083 359 aa10.83□□□□□ -0.68
HCFC1-202ENST00000369984 FAM60AQ9NP50 221 aa10.83□□□□□ -0.68
HCFC1-202ENST00000369984 HPRT1P00492 218 aa10.83□□□□□ -0.68
HCFC1-202ENST00000369984 PRDM14Q9GZV8 571 aa10.83□□□□□ -0.68
HCFC1-202ENST00000369984 KLK15Q9H2R5 256 aa10.83□□□□□ -0.68
HCFC1-202ENST00000369984 R4GN57 208 aa10.83□□□□□ -0.68
HCFC1-202ENST00000369984 TRAV21A0A0B4J279 112 aa10.82□□□□□ -0.68
HCFC1-202ENST00000369984 A0A1W2PPE3 182 aa10.82□□□□□ -0.68
HCFC1-202ENST00000369984 A0A1W2PS18 150 aa10.82□□□□□ -0.68
HCFC1-202ENST00000369984 MT-ND6P03923 174 aa10.82□□□□□ -0.68
HCFC1-202ENST00000369984 FOLR2P14207 255 aa10.82□□□□□ -0.68
HCFC1-202ENST00000369984 MMP16P51512 607 aa10.82□□□□□ -0.68
HCFC1-202ENST00000369984 TMEM249Q2WGJ8 235 aa10.82□□□□□ -0.68
HCFC1-202ENST00000369984 COX14Q96I36 57 aa10.82□□□□□ -0.68
HCFC1-202ENST00000369984 NYNRINQ9P2P1 1898 aaKnown RBP10.82□□□□□ -0.68
HCFC1-202ENST00000369984 EFNB2P52799 333 aa10.82□□□□□ -0.68
HCFC1-202ENST00000369984 CTAG1AP78358 180 aa10.82□□□□□ -0.68
HCFC1-202ENST00000369984 PAPPA-AS1Q5QFB9 102 aa10.82□□□□□ -0.68
HCFC1-202ENST00000369984 MRPS18BQ9Y676 258 aaKnown RBP10.82□□□□□ -0.68
HCFC1-202ENST00000369984 DYSFO75923 2080 aa10.82□□□□□ -0.68
HCFC1-202ENST00000369984 DOCK4Q8N1I0 1966 aa10.82□□□□□ -0.68
HCFC1-202ENST00000369984 TRAV8-2A0A0B4J237 113 aa10.82□□□□□ -0.68
HCFC1-202ENST00000369984 HOGA1Q86XE5 327 aa10.82□□□□□ -0.68
HCFC1-202ENST00000369984 ZNF714Q96N38 554 aa10.82□□□□□ -0.68
HCFC1-202ENST00000369984 UCN2Q96RP3 112 aa10.82□□□□□ -0.68
HCFC1-202ENST00000369984 LY75O60449 1722 aa10.82□□□□□ -0.68
HCFC1-202ENST00000369984 CLDN14O95500 239 aa10.82□□□□□ -0.68
HCFC1-202ENST00000369984 ARL14EPLP0DKL9 152 aa10.82□□□□□ -0.68
HCFC1-202ENST00000369984 OR51M1Q9H341 326 aa10.82□□□□□ -0.68
HCFC1-202ENST00000369984 HRKO00198 91 aa10.82□□□□□ -0.68
HCFC1-202ENST00000369984 TSPAN2O60636 221 aa10.82□□□□□ -0.68
HCFC1-202ENST00000369984 PQLC2Q6ZP29 291 aa10.82□□□□□ -0.68
HCFC1-202ENST00000369984 STPG3Q8N7X2 389 aa10.82□□□□□ -0.68
HCFC1-202ENST00000369984 SMOC1Q9H4F8 434 aa10.82□□□□□ -0.68
HCFC1-202ENST00000369984 FSCN3Q9NQT6 498 aa10.82□□□□□ -0.68
HCFC1-202ENST00000369984 H0Y980 276 aa10.82□□□□□ -0.68
HCFC1-202ENST00000369984 HLA-DQA1P01909 254 aa10.82□□□□□ -0.68
HCFC1-202ENST00000369984 ERGP11308 486 aa10.82□□□□□ -0.68
HCFC1-202ENST00000369984 COX6B1P14854 86 aa10.82□□□□□ -0.68
HCFC1-202ENST00000369984 MEF2BQ02080 365 aaPredicted RBP10.82□□□□□ -0.68
HCFC1-202ENST00000369984 C2orf83Q53S99 150 aa10.82□□□□□ -0.68
HCFC1-202ENST00000369984 OR5AC2Q9NZP5 309 aa10.82□□□□□ -0.68
HCFC1-202ENST00000369984 CXCL2P19875 107 aa10.82□□□□□ -0.68
HCFC1-202ENST00000369984 PSG6Q00889 435 aa10.82□□□□□ -0.68
HCFC1-202ENST00000369984 LINC00470Q9BZP3 86 aa10.82□□□□□ -0.68
HCFC1-202ENST00000369984 HILPDAQ9Y5L2 63 aa10.82□□□□□ -0.68
HCFC1-202ENST00000369984 S1PR2O95136 353 aa10.81□□□□□ -0.68
HCFC1-202ENST00000369984 KLK2P20151 261 aa10.81□□□□□ -0.68
HCFC1-202ENST00000369984 GUCA2BQ16661 112 aa10.81□□□□□ -0.68
HCFC1-202ENST00000369984 MDP1Q86V88 176 aa10.81□□□□□ -0.68
HCFC1-202ENST00000369984 PRSS27Q9BQR3 290 aa10.81□□□□□ -0.68
HCFC1-202ENST00000369984 IGHV3OR16-12A0A075B7B8 117 aa10.81□□□□□ -0.68
HCFC1-202ENST00000369984 RUNX1Q01196 453 aa10.81□□□□□ -0.68
HCFC1-202ENST00000369984 KCNK7Q9Y2U2 307 aa10.81□□□□□ -0.68
HCFC1-202ENST00000369984 CLDN16Q9Y5I7 305 aa10.81□□□□□ -0.68
HCFC1-202ENST00000369984 PLA2G10O15496 165 aa10.81□□□□□ -0.68
HCFC1-202ENST00000369984 TFPI2P48307 235 aa10.81□□□□□ -0.68
HCFC1-202ENST00000369984 PAPPAQ13219 1627 aa10.81□□□□□ -0.68
HCFC1-202ENST00000369984 IGHV1OR15-9A0A0B4J2B8 117 aa10.81□□□□□ -0.68
HCFC1-202ENST00000369984 RBMY1BA6NDE4 496 aaKnown RBP10.81□□□□□ -0.68
HCFC1-202ENST00000369984 RBMY1EA6NEQ0 496 aaKnown RBP10.81□□□□□ -0.68
HCFC1-202ENST00000369984 J3QT63 122 aa10.81□□□□□ -0.68
HCFC1-202ENST00000369984 RBMY1DP0C7P1 496 aaKnown RBP10.81□□□□□ -0.68
HCFC1-202ENST00000369984 RBMY1A1P0DJD3 496 aaKnown RBP10.81□□□□□ -0.68
HCFC1-202ENST00000369984 RBMY1CP0DJD4 496 aa10.81□□□□□ -0.68
HCFC1-202ENST00000369984 VSIG8P0DPA2 414 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms