RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 HIST1H2BAQ96A08 127 aa4.5□□□□□ -1.69
SMNDC1-202ENST00000369603 RNF2Q99496 336 aa4.5□□□□□ -1.69
SMNDC1-202ENST00000369603 HES4Q9HCC6 221 aa4.5□□□□□ -1.69
SMNDC1-202ENST00000369603 ASCL3Q9NQ33 180 aa4.5□□□□□ -1.69
SMNDC1-202ENST00000369603 ZNF355PQ9NSJ1 428 aa4.5□□□□□ -1.69
SMNDC1-202ENST00000369603 IDI2-AS1Q9NZ38 188 aa4.5□□□□□ -1.69
SMNDC1-202ENST00000369603 SLC45A2Q9UMX9 530 aa4.5□□□□□ -1.69
SMNDC1-202ENST00000369603 IGKV1-27A0A075B6S5 117 aa4.5□□□□□ -1.69
SMNDC1-202ENST00000369603 C12orf77C9JDV5 145 aa4.5□□□□□ -1.69
SMNDC1-202ENST00000369603 TM4SF5O14894 197 aa4.5□□□□□ -1.69
SMNDC1-202ENST00000369603 COX7A2P2O60397 106 aa4.5□□□□□ -1.69
SMNDC1-202ENST00000369603 MPDU1O75352 247 aa4.5□□□□□ -1.69
SMNDC1-202ENST00000369603 OR5G3P0C626 314 aa4.5□□□□□ -1.69
SMNDC1-202ENST00000369603 ID4P47928 161 aa4.5□□□□□ -1.69
SMNDC1-202ENST00000369603 PNRC1Q12796 327 aaPredicted RBP4.5□□□□□ -1.69
SMNDC1-202ENST00000369603 CLEC12BQ2HXU8 276 aa4.5□□□□□ -1.69
SMNDC1-202ENST00000369603 TIGITQ495A1 244 aa4.5□□□□□ -1.69
SMNDC1-202ENST00000369603 LY6G6FQ5SQ64 297 aa4.5□□□□□ -1.69
SMNDC1-202ENST00000369603 NCR3LG1Q68D85 454 aa4.5□□□□□ -1.69
SMNDC1-202ENST00000369603 BTNL8Q6UX41 500 aa4.5□□□□□ -1.69
SMNDC1-202ENST00000369603 NECAP1Q8NC96 275 aa4.5□□□□□ -1.69
SMNDC1-202ENST00000369603 OR1L8Q8NGR8 309 aa4.5□□□□□ -1.69
SMNDC1-202ENST00000369603 RPUSD4Q96CM3 377 aaKnown RBP4.5□□□□□ -1.69
SMNDC1-202ENST00000369603 HARBI1Q96MB7 349 aa4.5□□□□□ -1.69
SMNDC1-202ENST00000369603 SEBOXQ9HB31 216 aaPredicted RBP4.5□□□□□ -1.69
SMNDC1-202ENST00000369603 MANBALQ9NQG1 85 aa4.5□□□□□ -1.69
SMNDC1-202ENST00000369603 TMEM56-RWDD3S4R434 201 aa4.5□□□□□ -1.69
SMNDC1-202ENST00000369603 C5orf63A6NC05 138 aa4.5□□□□□ -1.69
SMNDC1-202ENST00000369603 WNT9BO14905 357 aa4.5□□□□□ -1.69
SMNDC1-202ENST00000369603 ACAA1P09110 424 aaPredicted RBP4.5□□□□□ -1.69
SMNDC1-202ENST00000369603 NPY1RP25929 384 aa4.5□□□□□ -1.69
SMNDC1-202ENST00000369603 G0S2P27469 103 aa4.5□□□□□ -1.69
SMNDC1-202ENST00000369603 APOBEC3AP31941 199 aaPredicted RBP4.5□□□□□ -1.69
SMNDC1-202ENST00000369603 TMEM41BQ5BJD5 291 aa4.5□□□□□ -1.69
SMNDC1-202ENST00000369603 MBNL2Q5VZF2 373 aaKnown RBP4.5□□□□□ -1.69
SMNDC1-202ENST00000369603 IGFL3Q6UXB1 125 aa4.5□□□□□ -1.69
SMNDC1-202ENST00000369603 LRTM2Q8N967 370 aa4.5□□□□□ -1.69
SMNDC1-202ENST00000369603 OR52M1Q8NGK5 317 aa4.5□□□□□ -1.69
SMNDC1-202ENST00000369603 OR13D1Q8NGV5 346 aa4.5□□□□□ -1.69
SMNDC1-202ENST00000369603 ZNF596Q8TC21 504 aa4.5□□□□□ -1.69
SMNDC1-202ENST00000369603 STARD4Q96DR4 205 aa4.5□□□□□ -1.69
SMNDC1-202ENST00000369603 SMIM8Q96KF7 97 aa4.5□□□□□ -1.69
SMNDC1-202ENST00000369603 RHOVQ96L33 236 aa4.5□□□□□ -1.69
SMNDC1-202ENST00000369603 PCDH15Q96QU1 1955 aa4.5□□□□□ -1.69
SMNDC1-202ENST00000369603 TRAV24A0A0B4J272 114 aa4.5□□□□□ -1.69
SMNDC1-202ENST00000369603 IGHV1-18A0A0C4DH31 117 aa4.5□□□□□ -1.69
SMNDC1-202ENST00000369603 ZNF737O75373 536 aa4.5□□□□□ -1.69
SMNDC1-202ENST00000369603 COX7A1P24310 79 aa4.5□□□□□ -1.69
SMNDC1-202ENST00000369603 ZNF146Q15072 292 aa4.5□□□□□ -1.69
SMNDC1-202ENST00000369603 IGF2-ASQ6U949 168 aa4.5□□□□□ -1.69
SMNDC1-202ENST00000369603 ZNF497Q6ZNH5 498 aa4.5□□□□□ -1.69
SMNDC1-202ENST00000369603 DNM1P46Q6ZS02 220 aa4.5□□□□□ -1.69
SMNDC1-202ENST00000369603 Q6ZS49 121 aa4.5□□□□□ -1.69
SMNDC1-202ENST00000369603 DOLPP1Q86YN1 238 aa4.5□□□□□ -1.69
SMNDC1-202ENST00000369603 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.5□□□□□ -1.69
SMNDC1-202ENST00000369603 TMEM230Q96A57 120 aa4.5□□□□□ -1.69
SMNDC1-202ENST00000369603 ACY3Q96HD9 319 aa4.5□□□□□ -1.69
SMNDC1-202ENST00000369603 TRBV6-6A0A0A6YYG2 114 aa4.49□□□□□ -1.69
SMNDC1-202ENST00000369603 E9PLN8 166 aa4.49□□□□□ -1.69
SMNDC1-202ENST00000369603 C1QL1O75973 258 aa4.49□□□□□ -1.69
SMNDC1-202ENST00000369603 OPRK1P41145 380 aa4.49□□□□□ -1.69
SMNDC1-202ENST00000369603 ERVFRD-1P60508 538 aa4.49□□□□□ -1.69
SMNDC1-202ENST00000369603 GNB2P62879 340 aa4.49□□□□□ -1.69
SMNDC1-202ENST00000369603 SRSF3P84103 164 aaKnown RBP4.49□□□□□ -1.69
SMNDC1-202ENST00000369603 TNFRSF9Q07011 255 aa4.49□□□□□ -1.69
SMNDC1-202ENST00000369603 FOXF2Q12947 444 aa4.49□□□□□ -1.69
SMNDC1-202ENST00000369603 RNFT1Q5M7Z0 435 aa4.49□□□□□ -1.69
SMNDC1-202ENST00000369603 WDR82Q6UXN9 313 aa4.49□□□□□ -1.69
SMNDC1-202ENST00000369603 ZNF600Q6ZNG1 722 aa4.49□□□□□ -1.69
SMNDC1-202ENST00000369603 FAM210BQ96KR6 192 aa4.49□□□□□ -1.69
SMNDC1-202ENST00000369603 VKORC1Q9BQB6 163 aa4.49□□□□□ -1.69
SMNDC1-202ENST00000369603 SAMD10Q9BYL1 202 aa4.49□□□□□ -1.69
SMNDC1-202ENST00000369603 INSIG2Q9Y5U4 225 aa4.49□□□□□ -1.69
SMNDC1-202ENST00000369603 CTXND1A0A1B0GTU2 59 aa4.49□□□□□ -1.69
SMNDC1-202ENST00000369603 MSGN1A6NI15 193 aa4.49□□□□□ -1.69
SMNDC1-202ENST00000369603 MARCH11A6NNE9 402 aa4.49□□□□□ -1.69
SMNDC1-202ENST00000369603 H0YL77 283 aa4.49□□□□□ -1.69
SMNDC1-202ENST00000369603 J3QR06 171 aa4.49□□□□□ -1.69
SMNDC1-202ENST00000369603 NAPSAO96009 420 aa4.49□□□□□ -1.69
SMNDC1-202ENST00000369603 CYB5R3P00387 301 aaPredicted RBP4.49□□□□□ -1.69
SMNDC1-202ENST00000369603 FAM87AP0C7U9 286 aa4.49□□□□□ -1.69
SMNDC1-202ENST00000369603 NBL1P41271 181 aa4.49□□□□□ -1.69
SMNDC1-202ENST00000369603 ATP5IP56385 69 aaPredicted RBP4.49□□□□□ -1.69
SMNDC1-202ENST00000369603 UBE2G1P62253 170 aa4.49□□□□□ -1.69
SMNDC1-202ENST00000369603 MEF2CQ06413 473 aaPredicted RBP4.49□□□□□ -1.69
SMNDC1-202ENST00000369603 KHDC3LQ587J8 217 aa4.49□□□□□ -1.69
SMNDC1-202ENST00000369603 SPINK9Q5DT21 86 aa4.49□□□□□ -1.69
SMNDC1-202ENST00000369603 CCDC144NLQ6NUI1 221 aa4.49□□□□□ -1.69
SMNDC1-202ENST00000369603 WDR31Q8NA23 367 aa4.49□□□□□ -1.69
SMNDC1-202ENST00000369603 OR1L4Q8NGR5 311 aa4.49□□□□□ -1.69
SMNDC1-202ENST00000369603 PATZ1Q9HBE1 687 aaKnown RBP4.49□□□□□ -1.69
SMNDC1-202ENST00000369603 THYN1Q9P016 225 aa4.49□□□□□ -1.69
SMNDC1-202ENST00000369603 IL36RNQ9UBH0 155 aa4.49□□□□□ -1.69
SMNDC1-202ENST00000369603 VAX2Q9UIW0 290 aa4.49□□□□□ -1.69
SMNDC1-202ENST00000369603 ICE1Q9Y2F5 2266 aa4.49□□□□□ -1.69
SMNDC1-202ENST00000369603 CEACAM18A8MTB9 384 aa4.49□□□□□ -1.69
SMNDC1-202ENST00000369603 CLDN34H7C241 214 aa4.49□□□□□ -1.69
SMNDC1-202ENST00000369603 IGLV3-1P01715 115 aa4.49□□□□□ -1.69
SMNDC1-202ENST00000369603 SSTR5P35346 364 aa4.49□□□□□ -1.69
SMNDC1-202ENST00000369603 HGFACQ04756 655 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms