RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 GSTZ1O43708 216 aaPredicted RBP1.24□□□□□ -2.21
ECHDC1-201ENST00000368287 OCMP0CE72 109 aaPredicted RBP1.24□□□□□ -2.21
ECHDC1-201ENST00000368287 TAS2R45P59539 299 aa1.24□□□□□ -2.21
ECHDC1-201ENST00000368287 GNA13Q14344 377 aa1.24□□□□□ -2.21
ECHDC1-201ENST00000368287 JOSD1Q15040 202 aaPredicted RBP1.24□□□□□ -2.21
ECHDC1-201ENST00000368287 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.24□□□□□ -2.21
ECHDC1-201ENST00000368287 CCDC121Q6ZUS5 278 aa1.24□□□□□ -2.21
ECHDC1-201ENST00000368287 SPATA12Q7Z6I5 190 aa1.24□□□□□ -2.21
ECHDC1-201ENST00000368287 BAP18Q8IXM2 172 aa1.24□□□□□ -2.21
ECHDC1-201ENST00000368287 LRRC34Q8IZ02 419 aa1.24□□□□□ -2.21
ECHDC1-201ENST00000368287 DAND5Q8N907 189 aa1.24□□□□□ -2.21
ECHDC1-201ENST00000368287 CNEP1R1Q8N9A8 125 aa1.24□□□□□ -2.21
ECHDC1-201ENST00000368287 RPS4Y2Q8TD47 263 aa1.24□□□□□ -2.21
ECHDC1-201ENST00000368287 SMIM19Q96E16 107 aa1.24□□□□□ -2.21
ECHDC1-201ENST00000368287 MBOAT7Q96N66 472 aa1.24□□□□□ -2.21
ECHDC1-201ENST00000368287 TIPINQ9BVW5 301 aa1.24□□□□□ -2.21
ECHDC1-201ENST00000368287 PLEKHJ1Q9NW61 149 aa1.24□□□□□ -2.21
ECHDC1-201ENST00000368287 KIAA2026Q5HYC2 2103 aa1.24□□□□□ -2.21
ECHDC1-201ENST00000368287 PTPRBP23467 1997 aa1.23□□□□□ -2.21
ECHDC1-201ENST00000368287 TRAV8-1A0A0A6YYK1 113 aa1.23□□□□□ -2.21
ECHDC1-201ENST00000368287 C1orf232A0A0U1RR37 186 aa1.23□□□□□ -2.21
ECHDC1-201ENST00000368287 GOLGA8KD6RF30 607 aa1.23□□□□□ -2.21
ECHDC1-201ENST00000368287 GOLGA8MH3BSY2 632 aa1.23□□□□□ -2.21
ECHDC1-201ENST00000368287 S1PR2O95136 353 aa1.23□□□□□ -2.21
ECHDC1-201ENST00000368287 PSMG1O95456 288 aa1.23□□□□□ -2.21
ECHDC1-201ENST00000368287 IGHV1-69P01742 117 aa1.23□□□□□ -2.21
ECHDC1-201ENST00000368287 REG1AP05451 166 aa1.23□□□□□ -2.21
ECHDC1-201ENST00000368287 HIST1H1CP16403 213 aaKnown RBP1.23□□□□□ -2.21
ECHDC1-201ENST00000368287 ATP6V0CP27449 155 aa1.23□□□□□ -2.21
ECHDC1-201ENST00000368287 FABP5Q01469 135 aa1.23□□□□□ -2.21
ECHDC1-201ENST00000368287 LGALS9BQ3B8N2 356 aa1.23□□□□□ -2.21
ECHDC1-201ENST00000368287 AMTNQ6UX39 209 aa1.23□□□□□ -2.21
ECHDC1-201ENST00000368287 GLT6D1Q7Z4J2 308 aa1.23□□□□□ -2.21
ECHDC1-201ENST00000368287 TMBIM1Q969X1 311 aa1.23□□□□□ -2.21
ECHDC1-201ENST00000368287 SFRP2Q96HF1 295 aa1.23□□□□□ -2.21
ECHDC1-201ENST00000368287 Q9BRP9 147 aa1.23□□□□□ -2.21
ECHDC1-201ENST00000368287 MND1Q9BWT6 205 aa1.23□□□□□ -2.21
ECHDC1-201ENST00000368287 NKX6-2Q9C056 277 aaPredicted RBP1.23□□□□□ -2.21
ECHDC1-201ENST00000368287 PCYT1BQ9Y5K3 369 aaPredicted RBP1.23□□□□□ -2.21
ECHDC1-201ENST00000368287 FBN3Q75N90 2809 aa1.23□□□□□ -2.21
ECHDC1-201ENST00000368287 PXDNLA1KZ92 1463 aa1.23□□□□□ -2.21
ECHDC1-201ENST00000368287 MUC6Q6W4X9 2439 aa1.23□□□□□ -2.21
ECHDC1-201ENST00000368287 SIPA1L1O43166 1804 aa1.22□□□□□ -2.21
ECHDC1-201ENST00000368287 UBFD1O14562 309 aaKnown RBP1.22□□□□□ -2.21
ECHDC1-201ENST00000368287 STX10O60499 249 aa1.22□□□□□ -2.21
ECHDC1-201ENST00000368287 IL6P05231 212 aa1.22□□□□□ -2.21
ECHDC1-201ENST00000368287 ZNF728P0DKX0 622 aa1.22□□□□□ -2.21
ECHDC1-201ENST00000368287 PEBP1P30086 187 aaKnown RBP1.22□□□□□ -2.21
ECHDC1-201ENST00000368287 XCL1P47992 114 aa1.22□□□□□ -2.21
ECHDC1-201ENST00000368287 CTBP2P56545 445 aa1.22□□□□□ -2.21
ECHDC1-201ENST00000368287 TMEM33P57088 247 aa1.22□□□□□ -2.21
ECHDC1-201ENST00000368287 HLA-DRB3P79483 266 aa1.22□□□□□ -2.21
ECHDC1-201ENST00000368287 PPP1R1AQ13522 171 aa1.22□□□□□ -2.21
ECHDC1-201ENST00000368287 AGTRAPQ6RW13 159 aa1.22□□□□□ -2.21
ECHDC1-201ENST00000368287 PLEKHG7Q6ZR37 379 aa1.22□□□□□ -2.21
ECHDC1-201ENST00000368287 NAA40Q86UY6 237 aa1.22□□□□□ -2.21
ECHDC1-201ENST00000368287 SLC35F6Q8N357 371 aa1.22□□□□□ -2.21
ECHDC1-201ENST00000368287 TMEM156Q8N614 296 aa1.22□□□□□ -2.21
ECHDC1-201ENST00000368287 TMEM251Q8N6I4 163 aa1.22□□□□□ -2.21
ECHDC1-201ENST00000368287 EEF1AKMT1Q8WVE0 214 aa1.22□□□□□ -2.21
ECHDC1-201ENST00000368287 ZNF625Q96I27 306 aaPredicted RBP1.22□□□□□ -2.21
ECHDC1-201ENST00000368287 PACRGQ96M98 296 aaPredicted RBP1.22□□□□□ -2.21
ECHDC1-201ENST00000368287 TMEM109Q9BVC6 243 aa1.22□□□□□ -2.21
ECHDC1-201ENST00000368287 TTTY13Q9BZ97 58 aa1.22□□□□□ -2.21
ECHDC1-201ENST00000368287 EMC3Q9P0I2 261 aa1.22□□□□□ -2.21
ECHDC1-201ENST00000368287 PRO2289Q9P1D8 64 aa1.22□□□□□ -2.21
ECHDC1-201ENST00000368287 DICER1Q9UPY3 1922 aaKnown RBP1.22□□□□□ -2.21
ECHDC1-201ENST00000368287 FN1P02751 2386 aaKnown RBP1.22□□□□□ -2.21
ECHDC1-201ENST00000368287 UBE2L6O14933 153 aa1.21□□□□□ -2.22
ECHDC1-201ENST00000368287 HLA-DRAP01903 254 aa1.21□□□□□ -2.22
ECHDC1-201ENST00000368287 COX5BP10606 129 aa1.21□□□□□ -2.22
ECHDC1-201ENST00000368287 EMP2P54851 167 aa1.21□□□□□ -2.22
ECHDC1-201ENST00000368287 SNAP25P60880 206 aa1.21□□□□□ -2.22
ECHDC1-201ENST00000368287 CXCR4P61073 352 aa1.21□□□□□ -2.22
ECHDC1-201ENST00000368287 RPS24P62847 133 aaKnown RBP1.21□□□□□ -2.22
ECHDC1-201ENST00000368287 KRTAP21-3Q3LHN1 58 aa1.21□□□□□ -2.22
ECHDC1-201ENST00000368287 OR4X2Q8NGF9 303 aa1.21□□□□□ -2.22
ECHDC1-201ENST00000368287 OR2D3Q8NGH3 330 aa1.21□□□□□ -2.22
ECHDC1-201ENST00000368287 OR4X1Q8NH49 305 aa1.21□□□□□ -2.22
ECHDC1-201ENST00000368287 SPACA4Q8TDM5 124 aa1.21□□□□□ -2.22
ECHDC1-201ENST00000368287 KCTD7Q96MP8 289 aa1.21□□□□□ -2.22
ECHDC1-201ENST00000368287 NMNAT3Q96T66 252 aa1.21□□□□□ -2.22
ECHDC1-201ENST00000368287 PTPRSQ13332 1948 aa1.21□□□□□ -2.22
ECHDC1-201ENST00000368287 PRRC2BQ5JSZ5 2229 aaKnown RBP1.2□□□□□ -2.22
ECHDC1-201ENST00000368287 MALRD1Q5VYJ5 2156 aa1.2□□□□□ -2.22
ECHDC1-201ENST00000368287 TEX50A0A1B0GTY4 177 aa1.2□□□□□ -2.22
ECHDC1-201ENST00000368287 A0A1B0GVG6 124 aa1.2□□□□□ -2.22
ECHDC1-201ENST00000368287 A0A1W2PQD3 144 aa1.2□□□□□ -2.22
ECHDC1-201ENST00000368287 GRIFINA4D1Z8 144 aa1.2□□□□□ -2.22
ECHDC1-201ENST00000368287 ZNF860A6NHJ4 632 aa1.2□□□□□ -2.22
ECHDC1-201ENST00000368287 TYMSP04818 313 aa1.2□□□□□ -2.22
ECHDC1-201ENST00000368287 CD79BP40259 229 aa1.2□□□□□ -2.22
ECHDC1-201ENST00000368287 MGAT3Q09327 533 aa1.2□□□□□ -2.22
ECHDC1-201ENST00000368287 GPHB5Q86YW7 130 aa1.2□□□□□ -2.22
ECHDC1-201ENST00000368287 ZNF283Q8N7M2 679 aa1.2□□□□□ -2.22
ECHDC1-201ENST00000368287 CLDND2Q8NHS1 167 aa1.2□□□□□ -2.22
ECHDC1-201ENST00000368287 HAVCR2Q8TDQ0 301 aa1.2□□□□□ -2.22
ECHDC1-201ENST00000368287 DCANP1Q8TF63 244 aa1.2□□□□□ -2.22
ECHDC1-201ENST00000368287 CPNE2Q96FN4 548 aaPredicted RBP1.2□□□□□ -2.22
ECHDC1-201ENST00000368287 SLC35G5Q96KT7 338 aa1.2□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms