RNA–Protein interactions for RNA: ENST00000368213.9

PTPRK-205, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-205ENST00000368213 CGB1A6NKQ9 187 aa9.13□□□□□ -0.95
PTPRK-205ENST00000368213 MDS2Q8NDY4 140 aa9.13□□□□□ -0.95
PTPRK-205ENST00000368213 FBXL17Q9UF56 701 aa9.13□□□□□ -0.95
PTPRK-205ENST00000368213 PTPRFP10586 1907 aa9.13□□□□□ -0.95
PTPRK-205ENST00000368213 ZFC3H1O60293 1989 aaKnown RBP9.13□□□□□ -0.95
PTPRK-205ENST00000368213 TCRBV4S1A1TA0A5B7 111 aa9.13□□□□□ -0.95
PTPRK-205ENST00000368213 CDS2O95674 445 aa9.13□□□□□ -0.95
PTPRK-205ENST00000368213 HIST1H1BP16401 226 aaKnown RBP9.13□□□□□ -0.95
PTPRK-205ENST00000368213 NPPCP23582 126 aa9.13□□□□□ -0.95
PTPRK-205ENST00000368213 MEF2CQ06413 473 aaPredicted RBP9.13□□□□□ -0.95
PTPRK-205ENST00000368213 C11orf44Q8N8P7 122 aa9.13□□□□□ -0.95
PTPRK-205ENST00000368213 LSM10Q969L4 123 aaKnown RBP9.13□□□□□ -0.95
PTPRK-205ENST00000368213 PLSCR4Q9NRQ2 329 aa9.13□□□□□ -0.95
PTPRK-205ENST00000368213 BTN1A1Q13410 526 aa9.13□□□□□ -0.95
PTPRK-205ENST00000368213 MIDNQ504T8 468 aa9.13□□□□□ -0.95
PTPRK-205ENST00000368213 CLEC9AQ6UXN8 241 aa9.13□□□□□ -0.95
PTPRK-205ENST00000368213 TMEM91Q6ZNR0 172 aa9.13□□□□□ -0.95
PTPRK-205ENST00000368213 POC1AQ8NBT0 407 aa9.13□□□□□ -0.95
PTPRK-205ENST00000368213 FAM103A1Q9BTL3 118 aaKnown RBP9.13□□□□□ -0.95
PTPRK-205ENST00000368213 CKAP5Q14008 2032 aa9.13□□□□□ -0.95
PTPRK-205ENST00000368213 IGLV3-32A0A0A0MS00 114 aa9.13□□□□□ -0.95
PTPRK-205ENST00000368213 TRBV5-5A0A0J9YX44 114 aa9.13□□□□□ -0.95
PTPRK-205ENST00000368213 DUXBA0A1W2PPF3 345 aa9.13□□□□□ -0.95
PTPRK-205ENST00000368213 B4DSR2 109 aa9.13□□□□□ -0.95
PTPRK-205ENST00000368213 PPP1R2P9O14990 202 aa9.13□□□□□ -0.95
PTPRK-205ENST00000368213 KLF4O43474 513 aa9.13□□□□□ -0.95
PTPRK-205ENST00000368213 SULT1A1P50225 295 aa9.13□□□□□ -0.95
PTPRK-205ENST00000368213 RND2P52198 227 aa9.13□□□□□ -0.95
PTPRK-205ENST00000368213 CRIM1Q9NZV1 1036 aa9.13□□□□□ -0.95
PTPRK-205ENST00000368213 RCC2Q9P258 522 aaKnown RBP9.13□□□□□ -0.95
PTPRK-205ENST00000368213 SIRT4Q9Y6E7 314 aaPredicted RBP9.13□□□□□ -0.95
PTPRK-205ENST00000368213 SCN2AQ99250 2005 aa9.13□□□□□ -0.95
PTPRK-205ENST00000368213 SRD5A1P18405 259 aa9.13□□□□□ -0.95
PTPRK-205ENST00000368213 FCGR2BP31994 310 aaPredicted RBP9.13□□□□□ -0.95
PTPRK-205ENST00000368213 NUTF2P61970 127 aaKnown RBP9.13□□□□□ -0.95
PTPRK-205ENST00000368213 ZNF672Q499Z4 452 aaPredicted RBP9.13□□□□□ -0.95
PTPRK-205ENST00000368213 PPP1R27Q86WC6 154 aa9.13□□□□□ -0.95
PTPRK-205ENST00000368213 TCTE3Q8IZS6 198 aa9.13□□□□□ -0.95
PTPRK-205ENST00000368213 C3orf56Q8N813 242 aa9.13□□□□□ -0.95
PTPRK-205ENST00000368213 C1QTNF5Q9BXJ0 243 aa9.13□□□□□ -0.95
PTPRK-205ENST00000368213 M0QZK8 103 aa9.12□□□□□ -0.95
PTPRK-205ENST00000368213 RHBDL1O75783 438 aa9.12□□□□□ -0.95
PTPRK-205ENST00000368213 OR10J1P30954 320 aa9.12□□□□□ -0.95
PTPRK-205ENST00000368213 SLC7A5P1Q8MH63 180 aa9.12□□□□□ -0.95
PTPRK-205ENST00000368213 C11orf42Q8N5U0 333 aa9.12□□□□□ -0.95
PTPRK-205ENST00000368213 DPH3Q96FX2 82 aa9.12□□□□□ -0.95
PTPRK-205ENST00000368213 SOSTQ9BQB4 213 aa9.12□□□□□ -0.95
PTPRK-205ENST00000368213 SLC25A33Q9BSK2 321 aa9.12□□□□□ -0.95
PTPRK-205ENST00000368213 GSX2Q9BZM3 304 aa9.12□□□□□ -0.95
PTPRK-205ENST00000368213 CACNA1IQ9P0X4 2223 aa9.12□□□□□ -0.95
PTPRK-205ENST00000368213 A0A1B0GVG6 124 aa9.12□□□□□ -0.95
PTPRK-205ENST00000368213 H0Y980 276 aa9.12□□□□□ -0.95
PTPRK-205ENST00000368213 ZNF735P0CB33 412 aa9.12□□□□□ -0.95
PTPRK-205ENST00000368213 ADAD2Q8NCV1 583 aaKnown RBP9.12□□□□□ -0.95
PTPRK-205ENST00000368213 ZDHHC11Q9H8X9 412 aa9.12□□□□□ -0.95
PTPRK-205ENST00000368213 IGKV3D-15A0A087WSY6 115 aa9.12□□□□□ -0.95
PTPRK-205ENST00000368213 IGHV3-35A0A0C4DH35 117 aa9.12□□□□□ -0.95
PTPRK-205ENST00000368213 MED19A0JLT2 244 aaPredicted RBP9.12□□□□□ -0.95
PTPRK-205ENST00000368213 SPINK4O60575 86 aa9.12□□□□□ -0.95
PTPRK-205ENST00000368213 IGKV3-15P01624 115 aa9.12□□□□□ -0.95
PTPRK-205ENST00000368213 COL8A1P27658 744 aa9.12□□□□□ -0.95
PTPRK-205ENST00000368213 PAXXQ9BUH6 204 aa9.12□□□□□ -0.95
PTPRK-205ENST00000368213 FBXL15Q9H469 300 aa9.12□□□□□ -0.95
PTPRK-205ENST00000368213 MST1P26927 711 aa9.12□□□□□ -0.95
PTPRK-205ENST00000368213 PEMTQ9UBM1 199 aa9.12□□□□□ -0.95
PTPRK-205ENST00000368213 INTS1Q8N201 2190 aaKnown RBP9.12□□□□□ -0.95
PTPRK-205ENST00000368213 IGKV1D-43A0A0B4J1Z2 117 aa9.11□□□□□ -0.95
PTPRK-205ENST00000368213 IGSF23A1L1A6 192 aa9.11□□□□□ -0.95
PTPRK-205ENST00000368213 TCAPO15273 167 aa9.11□□□□□ -0.95
PTPRK-205ENST00000368213 KLK2P20151 261 aa9.11□□□□□ -0.95
PTPRK-205ENST00000368213 NPVFQ9HCQ7 196 aa9.11□□□□□ -0.95
PTPRK-205ENST00000368213 CEP250Q9BV73 2442 aa9.11□□□□□ -0.95
PTPRK-205ENST00000368213 CHD5Q8TDI0 1954 aa9.11□□□□□ -0.95
PTPRK-205ENST00000368213 LOC102723971A0A1B0GUV8 181 aa9.11□□□□□ -0.95
PTPRK-205ENST00000368213 MOSP00540 346 aa9.11□□□□□ -0.95
PTPRK-205ENST00000368213 P01737 135 aa9.11□□□□□ -0.95
PTPRK-205ENST00000368213 SLC25A16P16260 332 aa9.11□□□□□ -0.95
PTPRK-205ENST00000368213 SLC16A13Q7RTY0 426 aa9.11□□□□□ -0.95
PTPRK-205ENST00000368213 FAM90A1Q86YD7 464 aa9.11□□□□□ -0.95
PTPRK-205ENST00000368213 TSPOP30536 169 aa9.11□□□□□ -0.95
PTPRK-205ENST00000368213 RANP62826 216 aaKnown RBP9.11□□□□□ -0.95
PTPRK-205ENST00000368213 PRB3Q04118 309 aaPredicted RBP9.11□□□□□ -0.95
PTPRK-205ENST00000368213 KCNK7Q9Y2U2 307 aa9.11□□□□□ -0.95
PTPRK-205ENST00000368213 LINC00312Q9Y6C7 94 aa9.11□□□□□ -0.95
PTPRK-205ENST00000368213 CD1BP29016 333 aa9.11□□□□□ -0.95
PTPRK-205ENST00000368213 SPANXN1Q5VSR9 72 aa9.11□□□□□ -0.95
PTPRK-205ENST00000368213 CADM3Q8N126 398 aa9.11□□□□□ -0.95
PTPRK-205ENST00000368213 MBPP02686 304 aaPredicted RBP9.11□□□□□ -0.95
PTPRK-205ENST00000368213 LINC00869P0C866 280 aa9.11□□□□□ -0.95
PTPRK-205ENST00000368213 KIR2DL2P43627 348 aaPredicted RBP9.11□□□□□ -0.95
PTPRK-205ENST00000368213 HSPE1P61604 102 aaKnown RBP9.11□□□□□ -0.95
PTPRK-205ENST00000368213 SELENOTP62341 195 aa9.11□□□□□ -0.95
PTPRK-205ENST00000368213 C12orf54Q6X4T0 127 aa9.11□□□□□ -0.95
PTPRK-205ENST00000368213 SYT8Q8NBV8 401 aa9.11□□□□□ -0.95
PTPRK-205ENST00000368213 ITLN2Q8WWU7 325 aaPredicted RBP9.11□□□□□ -0.95
PTPRK-205ENST00000368213 Q96M66 194 aa9.11□□□□□ -0.95
PTPRK-205ENST00000368213 HSF4Q9ULV5 492 aa9.11□□□□□ -0.95
PTPRK-205ENST00000368213 S1PR2O95136 353 aa9.1□□□□□ -0.95
PTPRK-205ENST00000368213 FAM157CP0CG43 387 aa9.1□□□□□ -0.95
PTPRK-205ENST00000368213 TUSC1Q2TAM9 212 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms