RNA–Protein interactions for RNA: ENST00000367630.8

VTA1-202, Transcript of vesicle trafficking 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTA1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-202ENST00000367630 FABP4P15090 132 aa6.2□□□□□ -1.42
VTA1-202ENST00000367630 ICAM4Q14773 271 aa6.2□□□□□ -1.42
VTA1-202ENST00000367630 OR10J3Q5JRS4 329 aa6.2□□□□□ -1.42
VTA1-202ENST00000367630 GGNQ86UU5 652 aa6.2□□□□□ -1.42
VTA1-202ENST00000367630 TEX29Q8N6K0 151 aa6.2□□□□□ -1.42
VTA1-202ENST00000367630 BEND2Q8NDZ0 799 aa6.2□□□□□ -1.42
VTA1-202ENST00000367630 PXMP4Q9Y6I8 212 aa6.2□□□□□ -1.42
VTA1-202ENST00000367630 FAM221AA4D161 298 aa6.2□□□□□ -1.42
VTA1-202ENST00000367630 OR7C2O60412 319 aa6.2□□□□□ -1.42
VTA1-202ENST00000367630 B3GALT5-AS1P59052 145 aa6.2□□□□□ -1.42
VTA1-202ENST00000367630 EDDM3AQ14507 147 aa6.2□□□□□ -1.42
VTA1-202ENST00000367630 RNFT1Q5M7Z0 435 aa6.2□□□□□ -1.42
VTA1-202ENST00000367630 TMEM14EPQ6UXP3 125 aa6.2□□□□□ -1.42
VTA1-202ENST00000367630 FLYWCH2Q96CP2 140 aaKnown RBP6.2□□□□□ -1.42
VTA1-202ENST00000367630 WBP1Q96G27 269 aa6.2□□□□□ -1.42
VTA1-202ENST00000367630 LMX1BO60663 402 aa6.2□□□□□ -1.42
VTA1-202ENST00000367630 C9orf135Q5VTT2 229 aa6.2□□□□□ -1.42
VTA1-202ENST00000367630 C10orf113Q5VZT2 155 aa6.2□□□□□ -1.42
VTA1-202ENST00000367630 OR2Z1Q8NG97 314 aa6.2□□□□□ -1.42
VTA1-202ENST00000367630 GRAMD2BQ96HH9 432 aa6.2□□□□□ -1.42
VTA1-202ENST00000367630 C1orf147Q96MC9 270 aaPredicted RBP6.2□□□□□ -1.42
VTA1-202ENST00000367630 CDIPTO14735 213 aa6.2□□□□□ -1.42
VTA1-202ENST00000367630 LMO1P25800 156 aa6.2□□□□□ -1.42
VTA1-202ENST00000367630 PSG9Q00887 426 aa6.2□□□□□ -1.42
VTA1-202ENST00000367630 COL10A1Q03692 680 aa6.2□□□□□ -1.42
VTA1-202ENST00000367630 TRIP6Q15654 476 aaKnown RBP6.2□□□□□ -1.42
VTA1-202ENST00000367630 HES3Q5TGS1 186 aa6.2□□□□□ -1.42
VTA1-202ENST00000367630 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.2□□□□□ -1.42
VTA1-202ENST00000367630 DRAM1Q8N682 238 aa6.2□□□□□ -1.42
VTA1-202ENST00000367630 ABHD5Q8WTS1 349 aa6.2□□□□□ -1.42
VTA1-202ENST00000367630 NPCDR1Q9BY65 106 aa6.2□□□□□ -1.42
VTA1-202ENST00000367630 OSTCQ9NRP0 149 aa6.2□□□□□ -1.42
VTA1-202ENST00000367630 IL36BQ9NZH7 164 aa6.2□□□□□ -1.42
VTA1-202ENST00000367630 IGKV1D-43A0A0B4J1Z2 117 aa6.19□□□□□ -1.42
VTA1-202ENST00000367630 A8MWL6 223 aa6.19□□□□□ -1.42
VTA1-202ENST00000367630 H0YIZ8 118 aa6.19□□□□□ -1.42
VTA1-202ENST00000367630 CCL11P51671 97 aa6.19□□□□□ -1.42
VTA1-202ENST00000367630 ERVFRD-1P60508 538 aa6.19□□□□□ -1.42
VTA1-202ENST00000367630 CENPVQ7Z7K6 275 aaPredicted RBP6.19□□□□□ -1.42
VTA1-202ENST00000367630 SHISA5Q8N114 240 aa6.19□□□□□ -1.42
VTA1-202ENST00000367630 C8orf31Q8N9H6 132 aa6.19□□□□□ -1.42
VTA1-202ENST00000367630 WDYHV1Q96HA8 205 aa6.19□□□□□ -1.42
VTA1-202ENST00000367630 FOXA2Q9Y261 457 aaPredicted RBP6.19□□□□□ -1.42
VTA1-202ENST00000367630 EIF3GO75821 320 aaKnown RBP eCLIP6.19□□□□□ -1.42
VTA1-202ENST00000367630 IGHG3P01860 377 aa6.19□□□□□ -1.42
VTA1-202ENST00000367630 IGSF11Q5DX21 431 aa6.19□□□□□ -1.42
VTA1-202ENST00000367630 IGF2-ASQ6U949 168 aa6.19□□□□□ -1.42
VTA1-202ENST00000367630 MAFAQ8NHW3 353 aaPredicted RBP6.19□□□□□ -1.42
VTA1-202ENST00000367630 LRRK1Q38SD2 2015 aa6.19□□□□□ -1.42
VTA1-202ENST00000367630 A0A1W2PRE2 83 aa6.19□□□□□ -1.42
VTA1-202ENST00000367630 SCTP09683 121 aa6.19□□□□□ -1.42
VTA1-202ENST00000367630 C8orf88P0DMB2 117 aa6.19□□□□□ -1.42
VTA1-202ENST00000367630 BMPERQ8N8U9 685 aa6.19□□□□□ -1.42
VTA1-202ENST00000367630 MRGPRDQ8TDS7 321 aa6.19□□□□□ -1.42
VTA1-202ENST00000367630 RCC1LQ96I51 464 aaKnown RBP6.19□□□□□ -1.42
VTA1-202ENST00000367630 GPR82Q96P67 336 aa6.19□□□□□ -1.42
VTA1-202ENST00000367630 OR4C12Q96R67 309 aa6.19□□□□□ -1.42
VTA1-202ENST00000367630 C19orf67A6NJJ6 358 aa6.19□□□□□ -1.42
VTA1-202ENST00000367630 FCN1O00602 326 aa6.19□□□□□ -1.42
VTA1-202ENST00000367630 TMPRSS2O15393 492 aa6.19□□□□□ -1.42
VTA1-202ENST00000367630 MMP23AO75900 390 aa6.19□□□□□ -1.42
VTA1-202ENST00000367630 ARG1P05089 322 aa6.19□□□□□ -1.42
VTA1-202ENST00000367630 RPLP1P05386 114 aaKnown RBP6.19□□□□□ -1.42
VTA1-202ENST00000367630 FAM78BQ5VT40 261 aa6.19□□□□□ -1.42
VTA1-202ENST00000367630 STUMQ69YW2 141 aa6.19□□□□□ -1.42
VTA1-202ENST00000367630 BET1LQ9NYM9 111 aa6.19□□□□□ -1.42
VTA1-202ENST00000367630 CALYQ9NYX4 217 aa6.19□□□□□ -1.42
VTA1-202ENST00000367630 FUT9Q9Y231 359 aa6.19□□□□□ -1.42
VTA1-202ENST00000367630 MARCH11A6NNE9 402 aa6.19□□□□□ -1.42
VTA1-202ENST00000367630 OR1A1Q9P1Q5 309 aa6.19□□□□□ -1.42
VTA1-202ENST00000367630 LINC00312Q9Y6C7 94 aa6.19□□□□□ -1.42
VTA1-202ENST00000367630 A0A087X0M5 115 aa6.19□□□□□ -1.42
VTA1-202ENST00000367630 A0A1B0GX30 115 aa6.19□□□□□ -1.42
VTA1-202ENST00000367630 LRRC3CA6NJW4 275 aa6.19□□□□□ -1.42
VTA1-202ENST00000367630 MGST1P10620 155 aaKnown RBP6.19□□□□□ -1.42
VTA1-202ENST00000367630 C4orf17Q53FE4 359 aa6.19□□□□□ -1.42
VTA1-202ENST00000367630 OR52L2PQ8NGH6 319 aa6.19□□□□□ -1.42
VTA1-202ENST00000367630 FMC1Q96HJ9 113 aa6.19□□□□□ -1.42
VTA1-202ENST00000367630 QTRT1Q9BXR0 403 aaKnown RBP6.19□□□□□ -1.42
VTA1-202ENST00000367630 SLC25A22Q9H936 323 aa6.19□□□□□ -1.42
VTA1-202ENST00000367630 PARD6AQ9NPB6 346 aa6.19□□□□□ -1.42
VTA1-202ENST00000367630 NAT8BQ9UHF3 227 aa6.19□□□□□ -1.42
VTA1-202ENST00000367630 WDR83OSQ9Y284 106 aa6.19□□□□□ -1.42
VTA1-202ENST00000367630 ZG16O60844 167 aa6.18□□□□□ -1.42
VTA1-202ENST00000367630 HSBP1O75506 76 aa6.18□□□□□ -1.42
VTA1-202ENST00000367630 TYMSP04818 313 aa6.18□□□□□ -1.42
VTA1-202ENST00000367630 EDN3P14138 238 aa6.18□□□□□ -1.42
VTA1-202ENST00000367630 RSPO3Q9BXY4 272 aaPredicted RBP6.18□□□□□ -1.42
VTA1-202ENST00000367630 URGCP-MRPS24S4R325 110 aa6.18□□□□□ -1.42
VTA1-202ENST00000367630 CLEC9AQ6UXN8 241 aa6.18□□□□□ -1.42
VTA1-202ENST00000367630 RELTQ969Z4 430 aa6.18□□□□□ -1.42
VTA1-202ENST00000367630 ZNF714Q96N38 554 aa6.18□□□□□ -1.42
VTA1-202ENST00000367630 SCNM1Q9BWG6 230 aa6.18□□□□□ -1.42
VTA1-202ENST00000367630 GNB1LQ9BYB4 327 aa6.18□□□□□ -1.42
VTA1-202ENST00000367630 DUSP13Q9UII6 198 aa6.18□□□□□ -1.42
VTA1-202ENST00000367630 KLF7O75840 302 aaPredicted RBP6.18□□□□□ -1.42
VTA1-202ENST00000367630 DKK1O94907 266 aa6.18□□□□□ -1.42
VTA1-202ENST00000367630 CCL4P13236 92 aa6.18□□□□□ -1.42
VTA1-202ENST00000367630 HNRNPA3P51991 378 aaKnown RBP6.18□□□□□ -1.42
VTA1-202ENST00000367630 UBE2L3P68036 154 aaKnown RBP6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms