RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 OSR2Q8N2R0 312 aa3.25□□□□□ -1.89
SYNE1-207ENST00000367255 PIK3CD-AS1Q5SR53 167 aa3.24□□□□□ -1.89
SYNE1-207ENST00000367255 MYOZ3Q8TDC0 251 aa3.24□□□□□ -1.89
SYNE1-207ENST00000367255 NEIL2Q969S2 332 aa3.24□□□□□ -1.89
SYNE1-207ENST00000367255 RP1P56715 2156 aa3.24□□□□□ -1.89
SYNE1-207ENST00000367255 PPP1R1AQ13522 171 aa3.24□□□□□ -1.89
SYNE1-207ENST00000367255 RFLNBQ8N5W9 214 aa3.24□□□□□ -1.89
SYNE1-207ENST00000367255 TMEM255BQ8WV15 326 aa3.24□□□□□ -1.89
SYNE1-207ENST00000367255 A0A1B0GUT8 65 aa3.24□□□□□ -1.89
SYNE1-207ENST00000367255 PVRP15151 417 aa3.24□□□□□ -1.89
SYNE1-207ENST00000367255 Q6ZVL8 140 aa3.24□□□□□ -1.89
SYNE1-207ENST00000367255 NPWQ8N729 165 aa3.24□□□□□ -1.89
SYNE1-207ENST00000367255 P04436 131 aa3.24□□□□□ -1.89
SYNE1-207ENST00000367255 IFITM1P13164 125 aa3.24□□□□□ -1.89
SYNE1-207ENST00000367255 ZNF665Q9H7R5 613 aa3.24□□□□□ -1.89
SYNE1-207ENST00000367255 RPL32P62910 135 aaKnown RBP3.24□□□□□ -1.89
SYNE1-207ENST00000367255 C10orf128Q5T292 105 aa3.24□□□□□ -1.89
SYNE1-207ENST00000367255 C10orf126Q8N4M7 172 aa3.24□□□□□ -1.89
SYNE1-207ENST00000367255 GZMMP51124 257 aa3.24□□□□□ -1.89
SYNE1-207ENST00000367255 GBGT1Q8N5D6 347 aa3.24□□□□□ -1.89
SYNE1-207ENST00000367255 CFHR5Q9BXR6 569 aa3.24□□□□□ -1.89
SYNE1-207ENST00000367255 C21orf140B9A014 251 aa3.24□□□□□ -1.89
SYNE1-207ENST00000367255 LOXL1Q08397 574 aaPredicted RBP3.24□□□□□ -1.89
SYNE1-207ENST00000367255 GPBAR1Q8TDU6 330 aa3.24□□□□□ -1.89
SYNE1-207ENST00000367255 TLNRD1Q9H1K6 362 aa3.24□□□□□ -1.89
SYNE1-207ENST00000367255 LPAR2Q9HBW0 351 aa3.24□□□□□ -1.89
SYNE1-207ENST00000367255 TRGV8A0A0C4DH27 118 aa3.24□□□□□ -1.89
SYNE1-207ENST00000367255 ACTL10Q5JWF8 245 aa3.24□□□□□ -1.89
SYNE1-207ENST00000367255 CYB561D1Q8N8Q1 229 aa3.24□□□□□ -1.89
SYNE1-207ENST00000367255 HINT3Q9NQE9 182 aaKnown RBP3.24□□□□□ -1.89
SYNE1-207ENST00000367255 HCFC2Q9Y5Z7 792 aa3.24□□□□□ -1.89
SYNE1-207ENST00000367255 IGLV3-32A0A0A0MS00 114 aa3.24□□□□□ -1.89
SYNE1-207ENST00000367255 PFN3P60673 137 aa3.24□□□□□ -1.89
SYNE1-207ENST00000367255 ZNF585BQ52M93 769 aa3.24□□□□□ -1.89
SYNE1-207ENST00000367255 CLDND2Q8NHS1 167 aa3.24□□□□□ -1.89
SYNE1-207ENST00000367255 KCNE3Q9Y6H6 103 aa3.24□□□□□ -1.89
SYNE1-207ENST00000367255 A0A1W2PR48 441 aa3.24□□□□□ -1.89
SYNE1-207ENST00000367255 EML2O95834 649 aa3.24□□□□□ -1.89
SYNE1-207ENST00000367255 FXYD4P59646 89 aa3.24□□□□□ -1.89
SYNE1-207ENST00000367255 CST6Q15828 149 aa3.24□□□□□ -1.89
SYNE1-207ENST00000367255 LAIR1Q6GTX8 287 aa3.24□□□□□ -1.89
SYNE1-207ENST00000367255 ARHGEF28Q8N1W1 1705 aaKnown RBP3.24□□□□□ -1.89
SYNE1-207ENST00000367255 EPPINO95925 133 aa3.24□□□□□ -1.89
SYNE1-207ENST00000367255 BAHD1Q8TBE0 780 aaPredicted RBP3.24□□□□□ -1.89
SYNE1-207ENST00000367255 ZNF25P17030 456 aaPredicted RBP3.24□□□□□ -1.89
SYNE1-207ENST00000367255 C2orf27AQ580R0 203 aa3.24□□□□□ -1.89
SYNE1-207ENST00000367255 SLC25A38Q96DW6 304 aa3.24□□□□□ -1.89
SYNE1-207ENST00000367255 WNT5BQ9H1J7 359 aa3.24□□□□□ -1.89
SYNE1-207ENST00000367255 DNAL4O96015 105 aa3.24□□□□□ -1.89
SYNE1-207ENST00000367255 PRSS12P56730 875 aa3.24□□□□□ -1.89
SYNE1-207ENST00000367255 CD300EQ496F6 205 aaPredicted RBP3.24□□□□□ -1.89
SYNE1-207ENST00000367255 Q6Q795 121 aa3.24□□□□□ -1.89
SYNE1-207ENST00000367255 OR4D11Q8NGI4 311 aa3.24□□□□□ -1.89
SYNE1-207ENST00000367255 PDCD1LG2Q9BQ51 273 aa3.24□□□□□ -1.89
SYNE1-207ENST00000367255 PPDPFQ9H3Y8 114 aa3.24□□□□□ -1.89
SYNE1-207ENST00000367255 PARP4Q9UKK3 1724 aaKnown RBP3.24□□□□□ -1.89
SYNE1-207ENST00000367255 J3KT08 172 aa3.24□□□□□ -1.89
SYNE1-207ENST00000367255 M0R2P5 195 aa3.24□□□□□ -1.89
SYNE1-207ENST00000367255 CRYGSP22914 178 aa3.24□□□□□ -1.89
SYNE1-207ENST00000367255 FAM78AQ5JUQ0 283 aa3.24□□□□□ -1.89
SYNE1-207ENST00000367255 IGFBPL1Q8WX77 278 aa3.24□□□□□ -1.89
SYNE1-207ENST00000367255 J3QT63 122 aa3.24□□□□□ -1.89
SYNE1-207ENST00000367255 MRPL33O75394 65 aaKnown RBP3.24□□□□□ -1.89
SYNE1-207ENST00000367255 LOXL3P58215 753 aa3.24□□□□□ -1.89
SYNE1-207ENST00000367255 PPP2CBP62714 309 aa3.24□□□□□ -1.89
SYNE1-207ENST00000367255 KISS1Q15726 138 aa3.24□□□□□ -1.89
SYNE1-207ENST00000367255 KRTCAP3Q53RY4 240 aa3.24□□□□□ -1.89
SYNE1-207ENST00000367255 C11orf52Q96A22 123 aa3.24□□□□□ -1.89
SYNE1-207ENST00000367255 A1L4Q6 167 aa3.24□□□□□ -1.89
SYNE1-207ENST00000367255 CER1O95813 267 aa3.24□□□□□ -1.89
SYNE1-207ENST00000367255 IGHV3-13P01766 116 aa3.24□□□□□ -1.89
SYNE1-207ENST00000367255 IGHV3-7P01780 117 aa3.24□□□□□ -1.89
SYNE1-207ENST00000367255 SSR4P51571 173 aa3.24□□□□□ -1.89
SYNE1-207ENST00000367255 GNB2P62879 340 aa3.24□□□□□ -1.89
SYNE1-207ENST00000367255 MARCH3Q86UD3 253 aa3.24□□□□□ -1.89
SYNE1-207ENST00000367255 KCNK17Q96T54 332 aa3.24□□□□□ -1.89
SYNE1-207ENST00000367255 ARID1BQ8NFD5 2236 aaPredicted RBP3.24□□□□□ -1.89
SYNE1-207ENST00000367255 MYO18AQ92614 2054 aaKnown RBP3.24□□□□□ -1.89
SYNE1-207ENST00000367255 ZG16O60844 167 aa3.24□□□□□ -1.89
SYNE1-207ENST00000367255 CT55Q8WUE5 264 aa3.24□□□□□ -1.89
SYNE1-207ENST00000367255 DNAJC13O75165 2243 aa3.24□□□□□ -1.89
SYNE1-207ENST00000367255 IFITM10A6NMD0 228 aa3.24□□□□□ -1.89
SYNE1-207ENST00000367255 ID1P41134 155 aa3.24□□□□□ -1.89
SYNE1-207ENST00000367255 CACNA1SQ13698 1873 aa3.24□□□□□ -1.89
SYNE1-207ENST00000367255 LIPT2A6NK58 231 aa3.24□□□□□ -1.89
SYNE1-207ENST00000367255 DPM2O94777 84 aa3.24□□□□□ -1.89
SYNE1-207ENST00000367255 SP7Q8TDD2 431 aaPredicted RBP3.24□□□□□ -1.89
SYNE1-207ENST00000367255 HDHD3Q9BSH5 251 aaPredicted RBP3.24□□□□□ -1.89
SYNE1-207ENST00000367255 SOX4Q06945 474 aaPredicted RBP3.24□□□□□ -1.89
SYNE1-207ENST00000367255 MSRB3Q8IXL7 192 aa3.24□□□□□ -1.89
SYNE1-207ENST00000367255 KLHDC3Q9BQ90 382 aa3.24□□□□□ -1.89
SYNE1-207ENST00000367255 AFDNP55196 1824 aaKnown RBP3.24□□□□□ -1.89
SYNE1-207ENST00000367255 SPTBN1Q01082 2364 aaKnown RBP3.24□□□□□ -1.89
SYNE1-207ENST00000367255 A8MWV9 139 aa3.24□□□□□ -1.89
SYNE1-207ENST00000367255 PRSS3P2Q8NHM4 247 aa3.24□□□□□ -1.89
SYNE1-207ENST00000367255 FOXH1O75593 365 aa3.24□□□□□ -1.89
SYNE1-207ENST00000367255 SAMD5Q5TGI4 173 aa3.24□□□□□ -1.89
SYNE1-207ENST00000367255 OR1K1Q8NGR3 316 aa3.24□□□□□ -1.89
SYNE1-207ENST00000367255 TMEM186Q96B77 213 aa3.24□□□□□ -1.89
SYNE1-207ENST00000367255 CD27P26842 260 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms