RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 SAP25Q8TEE9 199 aa11.44□□□□□ -0.58
PRKN-205ENST00000366897 AGMATQ9BSE5 352 aa11.44□□□□□ -0.58
PRKN-205ENST00000366897 LOC400499M0QZD8 3231 aa11.43□□□□□ -0.58
PRKN-205ENST00000366897 CTXND1A0A1B0GTU2 59 aa11.43□□□□□ -0.58
PRKN-205ENST00000366897 ANKRD30BLA7E2S9 258 aa11.43□□□□□ -0.58
PRKN-205ENST00000366897 FAM166BA8MTA8 275 aa11.43□□□□□ -0.58
PRKN-205ENST00000366897 C11orf94C9JXX5 98 aa11.43□□□□□ -0.58
PRKN-205ENST00000366897 DNPH1O43598 174 aa11.43□□□□□ -0.58
PRKN-205ENST00000366897 OR2H2O95918 312 aa11.43□□□□□ -0.58
PRKN-205ENST00000366897 GCGP01275 180 aa11.43□□□□□ -0.58
PRKN-205ENST00000366897 RPL29P47914 159 aaKnown RBP11.43□□□□□ -0.58
PRKN-205ENST00000366897 COA6Q5JTJ3 125 aaKnown RBP11.43□□□□□ -0.58
PRKN-205ENST00000366897 LYSMD4Q5XG99 296 aa11.43□□□□□ -0.58
PRKN-205ENST00000366897 TMEM14EPQ6UXP3 125 aa11.43□□□□□ -0.58
PRKN-205ENST00000366897 SAXO1Q8IYX7 474 aa11.43□□□□□ -0.58
PRKN-205ENST00000366897 OR5A2Q8NGI9 324 aa11.43□□□□□ -0.58
PRKN-205ENST00000366897 SDSLQ96GA7 329 aa11.43□□□□□ -0.58
PRKN-205ENST00000366897 PLPPR2Q96GM1 343 aa11.43□□□□□ -0.58
PRKN-205ENST00000366897 LIN7CQ9NUP9 197 aaKnown RBP11.43□□□□□ -0.58
PRKN-205ENST00000366897 A6NNC1 897 aa11.43□□□□□ -0.58
PRKN-205ENST00000366897 CFIP05156 583 aa11.43□□□□□ -0.58
PRKN-205ENST00000366897 FOLR3P41439 243 aa11.43□□□□□ -0.58
PRKN-205ENST00000366897 CNN1P51911 297 aaKnown RBP11.43□□□□□ -0.58
PRKN-205ENST00000366897 TGIF2LYQ8IUE0 185 aa11.43□□□□□ -0.58
PRKN-205ENST00000366897 SPTBN2O15020 2390 aa11.43□□□□□ -0.58
PRKN-205ENST00000366897 ZNF705FA8MVS1 300 aaPredicted RBP11.42□□□□□ -0.58
PRKN-205ENST00000366897 S1PR2O95136 353 aa11.42□□□□□ -0.58
PRKN-205ENST00000366897 NDUFB4O95168 129 aa11.42□□□□□ -0.58
PRKN-205ENST00000366897 ZNF705DP0CH99 300 aaPredicted RBP11.42□□□□□ -0.58
PRKN-205ENST00000366897 ZNF705BP0CI00 300 aaPredicted RBP11.42□□□□□ -0.58
PRKN-205ENST00000366897 TDRG1Q3Y452 100 aa11.42□□□□□ -0.58
PRKN-205ENST00000366897 NEIL1Q96FI4 390 aaPredicted RBP11.42□□□□□ -0.58
PRKN-205ENST00000366897 C5orf30Q96GV9 206 aa11.42□□□□□ -0.58
PRKN-205ENST00000366897 OR2D2Q9H210 308 aa11.42□□□□□ -0.58
PRKN-205ENST00000366897 RIMS4Q9H426 269 aaPredicted RBP11.42□□□□□ -0.58
PRKN-205ENST00000366897 C12orf49Q9H741 205 aa11.42□□□□□ -0.58
PRKN-205ENST00000366897 FKBP11Q9NYL4 201 aa11.42□□□□□ -0.58
PRKN-205ENST00000366897 POLR3KQ9Y2Y1 108 aaPredicted RBP11.42□□□□□ -0.58
PRKN-205ENST00000366897 ODAMA1E959 279 aa11.42□□□□□ -0.58
PRKN-205ENST00000366897 TMEM250H0YL14 139 aa11.42□□□□□ -0.58
PRKN-205ENST00000366897 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.42□□□□□ -0.58
PRKN-205ENST00000366897 GNG3P63215 75 aa11.42□□□□□ -0.58
PRKN-205ENST00000366897 Q6P435 159 aa11.42□□□□□ -0.58
PRKN-205ENST00000366897 WDR86Q86TI4 376 aa11.42□□□□□ -0.58
PRKN-205ENST00000366897 CXorf67Q86X51 503 aaPredicted RBP11.42□□□□□ -0.58
PRKN-205ENST00000366897 MCEMP1Q8IX19 187 aa11.42□□□□□ -0.58
PRKN-205ENST00000366897 ACY3Q96HD9 319 aa11.42□□□□□ -0.58
PRKN-205ENST00000366897 IMMP2LQ96T52 175 aa11.42□□□□□ -0.58
PRKN-205ENST00000366897 DUSP23Q9BVJ7 150 aa11.42□□□□□ -0.58
PRKN-205ENST00000366897 PILRBQ9UKJ0 227 aa11.42□□□□□ -0.58
PRKN-205ENST00000366897 TRAPPC1Q9Y5R8 145 aa11.42□□□□□ -0.58
PRKN-205ENST00000366897 ZFHX4Q86UP3 3567 aa11.42□□□□□ -0.58
PRKN-205ENST00000366897 MT-CO3P00414 261 aa11.42□□□□□ -0.58
PRKN-205ENST00000366897 EDDM3BP56851 147 aa11.42□□□□□ -0.58
PRKN-205ENST00000366897 ZNF573Q86YE8 665 aa11.42□□□□□ -0.58
PRKN-205ENST00000366897 GBGT1Q8N5D6 347 aa11.42□□□□□ -0.58
PRKN-205ENST00000366897 OR52L2PQ8NGH6 319 aa11.42□□□□□ -0.58
PRKN-205ENST00000366897 POM121L2Q96KW2 1035 aa11.42□□□□□ -0.58
PRKN-205ENST00000366897 PATZ1Q9HBE1 687 aaKnown RBP11.42□□□□□ -0.58
PRKN-205ENST00000366897 SVILO95425 2214 aa11.41□□□□□ -0.58
PRKN-205ENST00000366897 LNP1A1A4G5 178 aa11.41□□□□□ -0.58
PRKN-205ENST00000366897 C17orf98A8MV24 154 aa11.41□□□□□ -0.58
PRKN-205ENST00000366897 CDIPTO14735 213 aa11.41□□□□□ -0.58
PRKN-205ENST00000366897 GGCTO75223 188 aaKnown RBP11.41□□□□□ -0.58
PRKN-205ENST00000366897 THBS3P49746 956 aa11.41□□□□□ -0.58
PRKN-205ENST00000366897 GNB1P62873 340 aa11.41□□□□□ -0.58
PRKN-205ENST00000366897 ALKBH6Q3KRA9 238 aa11.41□□□□□ -0.58
PRKN-205ENST00000366897 TPRX1Q8N7U7 411 aa11.41□□□□□ -0.58
PRKN-205ENST00000366897 NPCDR1Q9BY65 106 aa11.41□□□□□ -0.58
PRKN-205ENST00000366897 IGHV3-43A0A0B4J1X8 118 aa11.41□□□□□ -0.58
PRKN-205ENST00000366897 RBFOX2O43251 390 aaKnown RBP eCLIP11.41□□□□□ -0.58
PRKN-205ENST00000366897 IGHV3-43DP0DP04 118 aa11.41□□□□□ -0.58
PRKN-205ENST00000366897 OR3A1P47881 315 aa11.41□□□□□ -0.58
PRKN-205ENST00000366897 PDLIM4P50479 330 aa11.41□□□□□ -0.58
PRKN-205ENST00000366897 GFRA1P56159 465 aa11.41□□□□□ -0.58
PRKN-205ENST00000366897 IQCJQ1A5X6 159 aa11.41□□□□□ -0.58
PRKN-205ENST00000366897 ZNF705AQ6ZN79 300 aaPredicted RBP11.41□□□□□ -0.58
PRKN-205ENST00000366897 CENPVQ7Z7K6 275 aaPredicted RBP11.41□□□□□ -0.58
PRKN-205ENST00000366897 WDYHV1Q96HA8 205 aa11.41□□□□□ -0.58
PRKN-205ENST00000366897 TMEM147Q9BVK8 224 aa11.41□□□□□ -0.58
PRKN-205ENST00000366897 DEFB108AA8MXU0 73 aa11.4□□□□□ -0.58
PRKN-205ENST00000366897 ZNF25P17030 456 aaPredicted RBP11.4□□□□□ -0.58
PRKN-205ENST00000366897 IL11RAQ14626 422 aa11.4□□□□□ -0.58
PRKN-205ENST00000366897 PPP1R32Q7Z5V6 425 aa11.4□□□□□ -0.58
PRKN-205ENST00000366897 LINC01551Q86U37 167 aa11.4□□□□□ -0.58
PRKN-205ENST00000366897 ZNF709Q8N972 641 aa11.4□□□□□ -0.58
PRKN-205ENST00000366897 BEND2Q8NDZ0 799 aa11.4□□□□□ -0.58
PRKN-205ENST00000366897 OR10P1Q8NGE3 313 aa11.4□□□□□ -0.58
PRKN-205ENST00000366897 MS4A10Q96PG2 267 aa11.4□□□□□ -0.58
PRKN-205ENST00000366897 IL17BQ9UHF5 180 aa11.4□□□□□ -0.58
PRKN-205ENST00000366897 CNOT1A5YKK6 2376 aaKnown RBP11.4□□□□□ -0.58
PRKN-205ENST00000366897 MED13Q9UHV7 2174 aa11.4□□□□□ -0.58
PRKN-205ENST00000366897 GRPP07492 148 aa11.4□□□□□ -0.58
PRKN-205ENST00000366897 COX5AP20674 150 aa11.4□□□□□ -0.58
PRKN-205ENST00000366897 LTC4SQ16873 150 aa11.4□□□□□ -0.58
PRKN-205ENST00000366897 LBHQ53QV2 105 aaPredicted RBP11.4□□□□□ -0.58
PRKN-205ENST00000366897 NUFIP2Q7Z417 695 aaKnown RBP11.4□□□□□ -0.58
PRKN-205ENST00000366897 SGMS2Q8NHU3 365 aa11.4□□□□□ -0.58
PRKN-205ENST00000366897 DTD1Q8TEA8 209 aa11.4□□□□□ -0.58
PRKN-205ENST00000366897 TBX15Q96SF7 602 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms