RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 DCAF10Q5QP82 559 aa10.15□□□□□ -0.79
CDC42BPA-202ENST00000366764 QTRT1Q9BXR0 403 aaKnown RBP10.15□□□□□ -0.79
CDC42BPA-202ENST00000366764 RBKSQ9H477 322 aa10.15□□□□□ -0.79
CDC42BPA-202ENST00000366764 OR52L2PQ8NGH6 319 aa10.15□□□□□ -0.79
CDC42BPA-202ENST00000366764 TBX15Q96SF7 602 aa10.15□□□□□ -0.79
CDC42BPA-202ENST00000366764 SH3BGRL2Q9UJC5 107 aa10.15□□□□□ -0.79
CDC42BPA-202ENST00000366764 HBZP02008 142 aa10.15□□□□□ -0.79
CDC42BPA-202ENST00000366764 TRAV1-1A0A0B4J248 108 aa10.14□□□□□ -0.79
CDC42BPA-202ENST00000366764 ZNF25P17030 456 aaPredicted RBP10.14□□□□□ -0.79
CDC42BPA-202ENST00000366764 PXMP4Q9Y6I8 212 aa10.14□□□□□ -0.79
CDC42BPA-202ENST00000366764 ZNF83P51522 516 aa10.14□□□□□ -0.79
CDC42BPA-202ENST00000366764 ZNF385CQ66K41 422 aaPredicted RBP10.14□□□□□ -0.79
CDC42BPA-202ENST00000366764 NHLH1Q02575 133 aa10.14□□□□□ -0.79
CDC42BPA-202ENST00000366764 MDP1Q86V88 176 aa10.14□□□□□ -0.79
CDC42BPA-202ENST00000366764 ZNF738Q8NE65 137 aa10.14□□□□□ -0.79
CDC42BPA-202ENST00000366764 FLVCR1-AS1Q8TAF5 88 aa10.14□□□□□ -0.79
CDC42BPA-202ENST00000366764 TMEM242Q9NWH2 141 aa10.14□□□□□ -0.79
CDC42BPA-202ENST00000366764 CD5P06127 495 aa10.14□□□□□ -0.79
CDC42BPA-202ENST00000366764 TMEM97Q5BJF2 176 aa10.14□□□□□ -0.79
CDC42BPA-202ENST00000366764 FGFRL1Q8N441 504 aa10.14□□□□□ -0.79
CDC42BPA-202ENST00000366764 GFI1Q99684 422 aa10.14□□□□□ -0.79
CDC42BPA-202ENST00000366764 TINAGQ9UJW2 476 aa10.14□□□□□ -0.79
CDC42BPA-202ENST00000366764 FAM208BQ5VWN6 2430 aa10.14□□□□□ -0.79
CDC42BPA-202ENST00000366764 SERTM2A0A1B0GWG4 89 aa10.14□□□□□ -0.79
CDC42BPA-202ENST00000366764 K7N7A8 449 aa10.14□□□□□ -0.79
CDC42BPA-202ENST00000366764 ATRAIDQ6UW56 229 aa10.14□□□□□ -0.79
CDC42BPA-202ENST00000366764 SFTPA2Q8IWL1 248 aa10.14□□□□□ -0.79
CDC42BPA-202ENST00000366764 PCGF1Q9BSM1 259 aa10.14□□□□□ -0.79
CDC42BPA-202ENST00000366764 RNF126Q9BV68 326 aa10.14□□□□□ -0.79
CDC42BPA-202ENST00000366764 REG4Q9BYZ8 158 aa10.14□□□□□ -0.79
CDC42BPA-202ENST00000366764 ZNF735P0CB33 412 aa10.14□□□□□ -0.79
CDC42BPA-202ENST00000366764 SRSF7Q16629 238 aaKnown RBP eCLIP10.14□□□□□ -0.79
CDC42BPA-202ENST00000366764 SNAI3Q3KNW1 292 aa10.14□□□□□ -0.79
CDC42BPA-202ENST00000366764 RPEQ96AT9 228 aa10.14□□□□□ -0.79
CDC42BPA-202ENST00000366764 CLN8Q9UBY8 286 aa10.14□□□□□ -0.79
CDC42BPA-202ENST00000366764 PAM16Q9Y3D7 125 aa10.14□□□□□ -0.79
CDC42BPA-202ENST00000366764 MYO9AB2RTY4 2548 aa10.14□□□□□ -0.79
CDC42BPA-202ENST00000366764 K7ERU9 68 aa10.14□□□□□ -0.79
CDC42BPA-202ENST00000366764 FHITP49789 147 aa10.14□□□□□ -0.79
CDC42BPA-202ENST00000366764 PRR14LQ5THK1 2151 aa10.14□□□□□ -0.79
CDC42BPA-202ENST00000366764 MAGEA5P43359 124 aa10.14□□□□□ -0.79
CDC42BPA-202ENST00000366764 OR5R1Q8NH85 324 aa10.14□□□□□ -0.79
CDC42BPA-202ENST00000366764 DIRC2Q96SL1 478 aa10.14□□□□□ -0.79
CDC42BPA-202ENST00000366764 WNT5BQ9H1J7 359 aa10.14□□□□□ -0.79
CDC42BPA-202ENST00000366764 PCDH15Q96QU1 1955 aa10.13□□□□□ -0.79
CDC42BPA-202ENST00000366764 FAM166AQ6J272 317 aa10.13□□□□□ -0.79
CDC42BPA-202ENST00000366764 RHOVQ96L33 236 aa10.13□□□□□ -0.79
CDC42BPA-202ENST00000366764 GOLT1BQ9Y3E0 138 aa10.13□□□□□ -0.79
CDC42BPA-202ENST00000366764 MSGN1A6NI15 193 aa10.13□□□□□ -0.79
CDC42BPA-202ENST00000366764 J3QR06 171 aa10.13□□□□□ -0.79
CDC42BPA-202ENST00000366764 CORTO00230 105 aa10.13□□□□□ -0.79
CDC42BPA-202ENST00000366764 TMEM190Q8WZ59 177 aa10.13□□□□□ -0.79
CDC42BPA-202ENST00000366764 RNF7Q9UBF6 113 aa10.13□□□□□ -0.79
CDC42BPA-202ENST00000366764 OR51B2Q9Y5P1 312 aa10.13□□□□□ -0.79
CDC42BPA-202ENST00000366764 EML6Q6ZMW3 1958 aa10.13□□□□□ -0.79
CDC42BPA-202ENST00000366764 ZNF818PQ6ZRF7 136 aa10.13□□□□□ -0.79
CDC42BPA-202ENST00000366764 GLRX5Q86SX6 157 aa10.13□□□□□ -0.79
CDC42BPA-202ENST00000366764 OR2I1PQ8NGU4 316 aa10.13□□□□□ -0.79
CDC42BPA-202ENST00000366764 SLC25A40Q8TBP6 338 aa10.13□□□□□ -0.79
CDC42BPA-202ENST00000366764 hCG_38984A0A1B0GV85 526 aa10.13□□□□□ -0.79
CDC42BPA-202ENST00000366764 NDUFB4O95168 129 aa10.13□□□□□ -0.79
CDC42BPA-202ENST00000366764 ZNF596Q8TC21 504 aa10.13□□□□□ -0.79
CDC42BPA-202ENST00000366764 MISP3Q96FF7 219 aa10.13□□□□□ -0.79
CDC42BPA-202ENST00000366764 IGLV3-12A0A075B6K2 115 aa10.13□□□□□ -0.79
CDC42BPA-202ENST00000366764 IFNL4K9M1U5 179 aa10.13□□□□□ -0.79
CDC42BPA-202ENST00000366764 LDLRAD4O15165 306 aa10.13□□□□□ -0.79
CDC42BPA-202ENST00000366764 SYNGR3O43761 229 aa10.13□□□□□ -0.79
CDC42BPA-202ENST00000366764 FLYWCH2Q96CP2 140 aaKnown RBP10.13□□□□□ -0.79
CDC42BPA-202ENST00000366764 DLL3Q9NYJ7 618 aa10.13□□□□□ -0.79
CDC42BPA-202ENST00000366764 WIPI2Q9Y4P8 454 aa10.13□□□□□ -0.79
CDC42BPA-202ENST00000366764 RPRMQ9NS64 109 aa10.13□□□□□ -0.79
CDC42BPA-202ENST00000366764 NCKAP5O14513 1909 aa10.13□□□□□ -0.79
CDC42BPA-202ENST00000366764 HARBI1Q96MB7 349 aa10.13□□□□□ -0.79
CDC42BPA-202ENST00000366764 ESRP2Q9H6T0 727 aaKnown RBP10.13□□□□□ -0.79
CDC42BPA-202ENST00000366764 TGIF2-C20orf24A0A0A6YYL0 155 aa10.12□□□□□ -0.79
CDC42BPA-202ENST00000366764 LNP1A1A4G5 178 aa10.12□□□□□ -0.79
CDC42BPA-202ENST00000366764 SLC31A2O15432 143 aa10.12□□□□□ -0.79
CDC42BPA-202ENST00000366764 SPSB4Q96A44 273 aa10.12□□□□□ -0.79
CDC42BPA-202ENST00000366764 RARRES2Q99969 163 aa10.12□□□□□ -0.79
CDC42BPA-202ENST00000366764 GNB4Q9HAV0 340 aa10.12□□□□□ -0.79
CDC42BPA-202ENST00000366764 IGHV3-43A0A0B4J1X8 118 aa10.12□□□□□ -0.79
CDC42BPA-202ENST00000366764 K7ESF4 209 aa10.12□□□□□ -0.79
CDC42BPA-202ENST00000366764 ZNF205O95201 554 aa10.12□□□□□ -0.79
CDC42BPA-202ENST00000366764 OR2H2O95918 312 aa10.12□□□□□ -0.79
CDC42BPA-202ENST00000366764 SRP19P09132 144 aaKnown RBP10.12□□□□□ -0.79
CDC42BPA-202ENST00000366764 IGHV3-43DP0DP04 118 aa10.12□□□□□ -0.79
CDC42BPA-202ENST00000366764 CA7P43166 264 aa10.12□□□□□ -0.79
CDC42BPA-202ENST00000366764 ARTNQ5T4W7 220 aa10.12□□□□□ -0.79
CDC42BPA-202ENST00000366764 DOLPP1Q86YN1 238 aa10.12□□□□□ -0.79
CDC42BPA-202ENST00000366764 PARLQ9H300 379 aa10.12□□□□□ -0.79
CDC42BPA-202ENST00000366764 CBY3A6NI87 242 aa10.12□□□□□ -0.79
CDC42BPA-202ENST00000366764 CAMPP49913 170 aa10.12□□□□□ -0.79
CDC42BPA-202ENST00000366764 SLC25A45Q8N413 288 aa10.12□□□□□ -0.79
CDC42BPA-202ENST00000366764 KIAA1671Q9BY89 1806 aa10.12□□□□□ -0.79
CDC42BPA-202ENST00000366764 COL8A1P27658 744 aa10.12□□□□□ -0.79
CDC42BPA-202ENST00000366764 ACSM6Q6P461 480 aa10.12□□□□□ -0.79
CDC42BPA-202ENST00000366764 ZNF441Q8N8Z8 693 aa10.12□□□□□ -0.79
CDC42BPA-202ENST00000366764 GPR61Q9BZJ8 451 aa10.12□□□□□ -0.79
CDC42BPA-202ENST00000366764 CACNA1AO00555 2505 aa10.12□□□□□ -0.79
CDC42BPA-202ENST00000366764 MFAP2P55001 183 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms