RNA–Protein interactions for RNA: ENST00000366481.3

TRIM58-201, Transcript of tripartite motif containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM58, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58-201ENST00000366481 TXN2Q99757 166 aa16.65■□□□□ 0.26
TRIM58-201ENST00000366481 TMEM204Q9BSN7 226 aa16.65■□□□□ 0.26
TRIM58-201ENST00000366481 PSMG3Q9BT73 122 aaPredicted RBP16.65■□□□□ 0.26
TRIM58-201ENST00000366481 PLSCR2Q9NRY7 297 aa16.65■□□□□ 0.26
TRIM58-201ENST00000366481 SPTA1P02549 2419 aa16.65■□□□□ 0.26
TRIM58-201ENST00000366481 LINC00614P0C842 121 aa16.64■□□□□ 0.26
TRIM58-201ENST00000366481 FKBP2P26885 142 aaKnown RBP16.64■□□□□ 0.26
TRIM58-201ENST00000366481 COL5A1-AS1Q5SY13 56 aa16.64■□□□□ 0.26
TRIM58-201ENST00000366481 SPATA46Q5T0L3 261 aa16.64■□□□□ 0.26
TRIM58-201ENST00000366481 ICE1Q9Y2F5 2266 aa16.64■□□□□ 0.25
TRIM58-201ENST00000366481 TMEM250H0YL14 139 aa16.64■□□□□ 0.25
TRIM58-201ENST00000366481 PTTG1IPP53801 180 aa16.64■□□□□ 0.25
TRIM58-201ENST00000366481 CLDN23Q96B33 292 aa16.64■□□□□ 0.25
TRIM58-201ENST00000366481 DMXL1Q9Y485 3027 aa16.64■□□□□ 0.25
TRIM58-201ENST00000366481 C20orf202A1L168 122 aa16.64■□□□□ 0.25
TRIM58-201ENST00000366481 CHRNB4P30926 498 aa16.64■□□□□ 0.25
TRIM58-201ENST00000366481 PPP1R32Q7Z5V6 425 aa16.64■□□□□ 0.25
TRIM58-201ENST00000366481 TUSC5Q8IXB3 177 aa16.64■□□□□ 0.25
TRIM58-201ENST00000366481 SH2D2AQ9NP31 389 aa16.64■□□□□ 0.25
TRIM58-201ENST00000366481 MDFIC2A0A1B0GVS7 189 aa16.63■□□□□ 0.25
TRIM58-201ENST00000366481 SYNGR1O43759 233 aa16.63■□□□□ 0.25
TRIM58-201ENST00000366481 MRPL33O75394 65 aaKnown RBP16.63■□□□□ 0.25
TRIM58-201ENST00000366481 NDUFB4O95168 129 aa16.63■□□□□ 0.25
TRIM58-201ENST00000366481 C1QTNF9P0C862 333 aa16.63■□□□□ 0.25
TRIM58-201ENST00000366481 KITLGP21583 273 aa16.63■□□□□ 0.25
TRIM58-201ENST00000366481 PIEZO2Q9H5I5 2752 aa16.63■□□□□ 0.25
TRIM58-201ENST00000366481 SRD5A2P31213 254 aa16.63■□□□□ 0.25
TRIM58-201ENST00000366481 ADMP35318 185 aa16.63■□□□□ 0.25
TRIM58-201ENST00000366481 CDKN1AP38936 164 aa16.63■□□□□ 0.25
TRIM58-201ENST00000366481 THBS3P49746 956 aa16.63■□□□□ 0.25
TRIM58-201ENST00000366481 MRPS11P82912 194 aaKnown RBP16.63■□□□□ 0.25
TRIM58-201ENST00000366481 MMDQ15546 238 aa16.63■□□□□ 0.25
TRIM58-201ENST00000366481 ACSM6Q6P461 480 aa16.63■□□□□ 0.25
TRIM58-201ENST00000366481 LINC00696Q6ZRV3 163 aa16.63■□□□□ 0.25
TRIM58-201ENST00000366481 CPT1CQ8TCG5 803 aa16.63■□□□□ 0.25
TRIM58-201ENST00000366481 PSMF1Q92530 271 aa16.63■□□□□ 0.25
TRIM58-201ENST00000366481 CBLN1P23435 193 aa16.62■□□□□ 0.25
TRIM58-201ENST00000366481 ZNF90Q03938 601 aa16.62■□□□□ 0.25
TRIM58-201ENST00000366481 HAPLN4Q86UW8 402 aa16.62■□□□□ 0.25
TRIM58-201ENST00000366481 GJE1A6NN92 205 aa16.62■□□□□ 0.25
TRIM58-201ENST00000366481 CRISP2P16562 243 aa16.62■□□□□ 0.25
TRIM58-201ENST00000366481 HOXA4Q00056 320 aaPredicted RBP16.62■□□□□ 0.25
TRIM58-201ENST00000366481 WDYHV1Q96HA8 205 aa16.62■□□□□ 0.25
TRIM58-201ENST00000366481 ZNF552Q9H707 407 aaPredicted RBP16.62■□□□□ 0.25
TRIM58-201ENST00000366481 MRPS18CQ9Y3D5 142 aaKnown RBP16.62■□□□□ 0.25
TRIM58-201ENST00000366481 ROS1P08922 2347 aa16.62■□□□□ 0.25
TRIM58-201ENST00000366481 GTF3C1Q12789 2109 aa16.62■□□□□ 0.25
TRIM58-201ENST00000366481 CTXND1A0A1B0GTU2 59 aa16.62■□□□□ 0.25
TRIM58-201ENST00000366481 SPINK4O60575 86 aa16.62■□□□□ 0.25
TRIM58-201ENST00000366481 PRDX4Q13162 271 aa16.62■□□□□ 0.25
TRIM58-201ENST00000366481 COTL1Q14019 142 aa16.62■□□□□ 0.25
TRIM58-201ENST00000366481 SPINK9Q5DT21 86 aa16.62■□□□□ 0.25
TRIM58-201ENST00000366481 OR5AU1Q8NGC0 362 aa16.62■□□□□ 0.25
TRIM58-201ENST00000366481 MGAQ8IWI9 3026 aa16.61■□□□□ 0.25
TRIM58-201ENST00000366481 TRAPPC2LH3BP13 241 aa16.61■□□□□ 0.25
TRIM58-201ENST00000366481 MCEMP1Q8IX19 187 aa16.61■□□□□ 0.25
TRIM58-201ENST00000366481 AGMATQ9BSE5 352 aa16.61■□□□□ 0.25
TRIM58-201ENST00000366481 DERL1Q9BUN8 251 aa16.61■□□□□ 0.25
TRIM58-201ENST00000366481 ASCL3Q9NQ33 180 aa16.61■□□□□ 0.25
TRIM58-201ENST00000366481 TNFSF13O75888 250 aa16.61■□□□□ 0.25
TRIM58-201ENST00000366481 CYB561P49447 251 aa16.61■□□□□ 0.25
TRIM58-201ENST00000366481 GAGE1Q13065 139 aa16.61■□□□□ 0.25
TRIM58-201ENST00000366481 C20orf204Q6ZNR8 217 aa16.61■□□□□ 0.25
TRIM58-201ENST00000366481 TMPRSS7Q7RTY8 843 aa16.61■□□□□ 0.25
TRIM58-201ENST00000366481 C12orf49Q9H741 205 aa16.61■□□□□ 0.25
TRIM58-201ENST00000366481 KRASP01116 189 aa16.6■□□□□ 0.25
TRIM58-201ENST00000366481 COX5AP20674 150 aa16.6■□□□□ 0.25
TRIM58-201ENST00000366481 Q6ZWC4 215 aa16.6■□□□□ 0.25
TRIM58-201ENST00000366481 MKXQ8IYA7 352 aa16.6■□□□□ 0.25
TRIM58-201ENST00000366481 ZNF295-AS1Q8N0V1 137 aa16.6■□□□□ 0.25
TRIM58-201ENST00000366481 MTCH1Q9NZJ7 389 aa16.6■□□□□ 0.25
TRIM58-201ENST00000366481 IGKV1-6A0A0C4DH72 117 aa16.6■□□□□ 0.25
TRIM58-201ENST00000366481 SERF1AO75920 110 aa16.6■□□□□ 0.25
TRIM58-201ENST00000366481 ZXDAP98168 799 aa16.6■□□□□ 0.25
TRIM58-201ENST00000366481 MSMO1Q15800 293 aa16.6■□□□□ 0.25
TRIM58-201ENST00000366481 SF3B5Q9BWJ5 86 aaKnown RBP16.6■□□□□ 0.25
TRIM58-201ENST00000366481 PCNX2A6NKB5 2137 aa16.6■□□□□ 0.25
TRIM58-201ENST00000366481 NAPSAO96009 420 aa16.6■□□□□ 0.25
TRIM58-201ENST00000366481 CTXN2P0C2S0 81 aa16.6■□□□□ 0.25
TRIM58-201ENST00000366481 RANP62826 216 aaKnown RBP16.6■□□□□ 0.25
TRIM58-201ENST00000366481 TMEM42Q69YG0 159 aa16.6■□□□□ 0.25
TRIM58-201ENST00000366481 MRPL21Q7Z2W9 205 aaKnown RBP16.6■□□□□ 0.25
TRIM58-201ENST00000366481 ARL6IP6Q8N6S5 226 aa16.6■□□□□ 0.25
TRIM58-201ENST00000366481 SIGLECL1Q8N7X8 197 aa16.6■□□□□ 0.25
TRIM58-201ENST00000366481 ARRDC1-AS1Q9H2J1 176 aa16.6■□□□□ 0.25
TRIM58-201ENST00000366481 OR2W1Q9Y3N9 320 aa16.6■□□□□ 0.25
TRIM58-201ENST00000366481 SPENQ96T58 3664 aaKnown RBP16.6■□□□□ 0.25
TRIM58-201ENST00000366481 F6UZH7 168 aa16.59■□□□□ 0.25
TRIM58-201ENST00000366481 CLN8Q9UBY8 286 aa16.59■□□□□ 0.25
TRIM58-201ENST00000366481 SUMO1P63165 101 aaKnown RBP16.58■□□□□ 0.25
TRIM58-201ENST00000366481 LCN2P80188 198 aa16.58■□□□□ 0.25
TRIM58-201ENST00000366481 TGFBR3Q03167 851 aa16.58■□□□□ 0.25
TRIM58-201ENST00000366481 Q6ZN92 141 aa16.58■□□□□ 0.25
TRIM58-201ENST00000366481 NUFIP2Q7Z417 695 aaKnown RBP16.58■□□□□ 0.25
TRIM58-201ENST00000366481 CT55Q8WUE5 264 aa16.58■□□□□ 0.25
TRIM58-201ENST00000366481 OR1A1Q9P1Q5 309 aa16.58■□□□□ 0.25
TRIM58-201ENST00000366481 ATP23Q9Y6H3 246 aa16.58■□□□□ 0.25
TRIM58-201ENST00000366481 A0A1W2PPV4 95 aa16.58■□□□□ 0.24
TRIM58-201ENST00000366481 MAGEA5P43359 124 aa16.58■□□□□ 0.24
TRIM58-201ENST00000366481 PXMP4Q9Y6I8 212 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 256.5 ms