RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 CARD18P57730 90 aa0.54□□□□□ -2.32
RNU4-28P-201ENST00000364739 HERVK_113P63121 156 aa0.54□□□□□ -2.32
RNU4-28P-201ENST00000364739 EMX1Q04741 257 aaPredicted RBP0.54□□□□□ -2.32
RNU4-28P-201ENST00000364739 MOGQ16653 247 aa0.54□□□□□ -2.32
RNU4-28P-201ENST00000364739 C7orf65Q6ZTY9 151 aa0.54□□□□□ -2.32
RNU4-28P-201ENST00000364739 OR51H1Q8NH63 302 aa0.54□□□□□ -2.32
RNU4-28P-201ENST00000364739 RNASE6Q93091 150 aaKnown RBP0.54□□□□□ -2.32
RNU4-28P-201ENST00000364739 TAAR3PQ9P1P4 343 aa0.54□□□□□ -2.32
RNU4-28P-201ENST00000364739 GLS2Q9UI32 602 aa0.54□□□□□ -2.32
RNU4-28P-201ENST00000364739 SULT1C2O00338 296 aa0.53□□□□□ -2.32
RNU4-28P-201ENST00000364739 GSTZ1O43708 216 aaPredicted RBP0.53□□□□□ -2.32
RNU4-28P-201ENST00000364739 TNFAIP8O95379 198 aa0.53□□□□□ -2.32
RNU4-28P-201ENST00000364739 SPATA31B1PQ5VZV4 182 aa0.53□□□□□ -2.32
RNU4-28P-201ENST00000364739 NATD1Q8N6N6 113 aa0.53□□□□□ -2.32
RNU4-28P-201ENST00000364739 GNB1LQ9BYB4 327 aa0.53□□□□□ -2.32
RNU4-28P-201ENST00000364739 OR51B6Q9H340 312 aa0.53□□□□□ -2.32
RNU4-28P-201ENST00000364739 MS4A12Q9NXJ0 267 aa0.53□□□□□ -2.32
RNU4-28P-201ENST00000364739 POFUT2Q9Y2G5 429 aa0.53□□□□□ -2.32
RNU4-28P-201ENST00000364739 GRIN2BQ13224 1484 aa0.53□□□□□ -2.33
RNU4-28P-201ENST00000364739 DICER1Q9UPY3 1922 aaKnown RBP0.52□□□□□ -2.33
RNU4-28P-201ENST00000364739 HMSDA8MTL9 139 aa0.52□□□□□ -2.33
RNU4-28P-201ENST00000364739 ARL6IP5O75915 188 aa0.52□□□□□ -2.33
RNU4-28P-201ENST00000364739 NQO2P16083 231 aa0.52□□□□□ -2.33
RNU4-28P-201ENST00000364739 IFNGR2P38484 337 aa0.52□□□□□ -2.33
RNU4-28P-201ENST00000364739 GNA12Q03113 381 aa0.52□□□□□ -2.33
RNU4-28P-201ENST00000364739 DEFB115Q30KQ5 88 aa0.52□□□□□ -2.33
RNU4-28P-201ENST00000364739 SLC36A1Q7Z2H8 476 aa0.52□□□□□ -2.33
RNU4-28P-201ENST00000364739 ST13P4Q8IZP2 240 aaPredicted RBP0.52□□□□□ -2.33
RNU4-28P-201ENST00000364739 Q8N2B8 174 aa0.52□□□□□ -2.33
RNU4-28P-201ENST00000364739 OR2D3Q8NGH3 330 aa0.52□□□□□ -2.33
RNU4-28P-201ENST00000364739 OR1L8Q8NGR8 309 aa0.52□□□□□ -2.33
RNU4-28P-201ENST00000364739 NMNAT3Q96T66 252 aa0.52□□□□□ -2.33
RNU4-28P-201ENST00000364739 NKX6-2Q9C056 277 aaPredicted RBP0.52□□□□□ -2.33
RNU4-28P-201ENST00000364739 MEIKINA0A087WXM9 373 aa0.51□□□□□ -2.33
RNU4-28P-201ENST00000364739 KLRC4O43908 158 aa0.51□□□□□ -2.33
RNU4-28P-201ENST00000364739 NPYP01303 97 aa0.51□□□□□ -2.33
RNU4-28P-201ENST00000364739 CCL2P13500 99 aa0.51□□□□□ -2.33
RNU4-28P-201ENST00000364739 LCN1P31025 176 aa0.51□□□□□ -2.33
RNU4-28P-201ENST00000364739 CA7P43166 264 aa0.51□□□□□ -2.33
RNU4-28P-201ENST00000364739 RBM11P57052 281 aaKnown RBP0.51□□□□□ -2.33
RNU4-28P-201ENST00000364739 LRRC75BQ2VPJ9 315 aa0.51□□□□□ -2.33
RNU4-28P-201ENST00000364739 GID4Q8IVV7 300 aa0.51□□□□□ -2.33
RNU4-28P-201ENST00000364739 BAP18Q8IXM2 172 aa0.51□□□□□ -2.33
RNU4-28P-201ENST00000364739 C1orf174Q8IYL3 243 aa0.51□□□□□ -2.33
RNU4-28P-201ENST00000364739 KIAA0232Q92628 1395 aa0.51□□□□□ -2.33
RNU4-28P-201ENST00000364739 DOHHQ9BU89 302 aa0.51□□□□□ -2.33
RNU4-28P-201ENST00000364739 THSD7AQ9UPZ6 1657 aa0.51□□□□□ -2.33
RNU4-28P-201ENST00000364739 POLR3HQ9Y535 204 aaPredicted RBP0.51□□□□□ -2.33
RNU4-28P-201ENST00000364739 F8W036 122 aa0.5□□□□□ -2.33
RNU4-28P-201ENST00000364739 RPSAP08865 295 aaKnown RBP0.5□□□□□ -2.33
RNU4-28P-201ENST00000364739 NUP62P37198 522 aaPredicted RBP0.5□□□□□ -2.33
RNU4-28P-201ENST00000364739 GABRA2P47869 451 aa0.5□□□□□ -2.33
RNU4-28P-201ENST00000364739 TMEM267Q0VDI3 215 aaPredicted RBP0.5□□□□□ -2.33
RNU4-28P-201ENST00000364739 STX3Q13277 289 aa0.5□□□□□ -2.33
RNU4-28P-201ENST00000364739 SCGB1D4Q6XE38 83 aa0.5□□□□□ -2.33
RNU4-28P-201ENST00000364739 SLC13A5Q86YT5 568 aaPredicted RBP0.5□□□□□ -2.33
RNU4-28P-201ENST00000364739 LRRC34Q8IZ02 419 aa0.5□□□□□ -2.33
RNU4-28P-201ENST00000364739 MBD3L1Q8WWY6 194 aa0.5□□□□□ -2.33
RNU4-28P-201ENST00000364739 SFRP2Q96HF1 295 aa0.5□□□□□ -2.33
RNU4-28P-201ENST00000364739 MED9Q9NWA0 146 aa0.5□□□□□ -2.33
RNU4-28P-201ENST00000364739 EXPH5Q8NEV8 1989 aa0.5□□□□□ -2.33
RNU4-28P-201ENST00000364739 NUP153P49790 1475 aaKnown RBP0.49□□□□□ -2.33
RNU4-28P-201ENST00000364739 H0YC42 278 aa0.49□□□□□ -2.33
RNU4-28P-201ENST00000364739 MPZL2O60487 215 aa0.49□□□□□ -2.33
RNU4-28P-201ENST00000364739 UGT2B11O75310 529 aa0.49□□□□□ -2.33
RNU4-28P-201ENST00000364739 NDUFB2O95178 105 aa0.49□□□□□ -2.33
RNU4-28P-201ENST00000364739 HBZP02008 142 aa0.49□□□□□ -2.33
RNU4-28P-201ENST00000364739 AGTR1P30556 359 aa0.49□□□□□ -2.33
RNU4-28P-201ENST00000364739 Q1T7F1 81 aa0.49□□□□□ -2.33
RNU4-28P-201ENST00000364739 TMEM249Q2WGJ8 235 aa0.49□□□□□ -2.33
RNU4-28P-201ENST00000364739 FAM173BQ6P4H8 233 aa0.49□□□□□ -2.33
RNU4-28P-201ENST00000364739 ZNF705AQ6ZN79 300 aaPredicted RBP0.49□□□□□ -2.33
RNU4-28P-201ENST00000364739 CCDC12Q8WUD4 166 aaPredicted RBP0.49□□□□□ -2.33
RNU4-28P-201ENST00000364739 SERPINB11Q96P15 392 aa0.49□□□□□ -2.33
RNU4-28P-201ENST00000364739 UGT2B28Q9BY64 529 aa0.49□□□□□ -2.33
RNU4-28P-201ENST00000364739 RBM7Q9Y580 266 aaKnown RBP0.49□□□□□ -2.33
RNU4-28P-201ENST00000364739 RP1P56715 2156 aa0.49□□□□□ -2.33
RNU4-28P-201ENST00000364739 M0R381 172 aa0.48□□□□□ -2.33
RNU4-28P-201ENST00000364739 NDUFS8O00217 210 aa0.48□□□□□ -2.33
RNU4-28P-201ENST00000364739 SERPINA7P05543 415 aa0.48□□□□□ -2.33
RNU4-28P-201ENST00000364739 SLC35E2BP0CK96 405 aa0.48□□□□□ -2.33
RNU4-28P-201ENST00000364739 RPL27AP46776 148 aaKnown RBP0.48□□□□□ -2.33
RNU4-28P-201ENST00000364739 ARHGAP11BQ3KRB8 267 aa0.48□□□□□ -2.33
RNU4-28P-201ENST00000364739 LYZL1Q6UWQ5 148 aa0.48□□□□□ -2.33
RNU4-28P-201ENST00000364739 RNASEH2CQ8TDP1 164 aaKnown RBP0.48□□□□□ -2.33
RNU4-28P-201ENST00000364739 IMMP2LQ96T52 175 aa0.48□□□□□ -2.33
RNU4-28P-201ENST00000364739 HBEGFQ99075 208 aa0.48□□□□□ -2.33
RNU4-28P-201ENST00000364739 TMEM208Q9BTX3 173 aa0.48□□□□□ -2.33
RNU4-28P-201ENST00000364739 EIF5A2Q9GZV4 153 aaKnown RBP0.48□□□□□ -2.33
RNU4-28P-201ENST00000364739 UBQLN4Q9NRR5 601 aa0.48□□□□□ -2.33
RNU4-28P-201ENST00000364739 NPATQ14207 1427 aa0.47□□□□□ -2.33
RNU4-28P-201ENST00000364739 MDN1Q9NU22 5596 aa0.47□□□□□ -2.33
RNU4-28P-201ENST00000364739 IGHV1-18A0A0C4DH31 117 aa0.47□□□□□ -2.33
RNU4-28P-201ENST00000364739 F5H5K5 113 aa0.47□□□□□ -2.33
RNU4-28P-201ENST00000364739 ORC5O43913 435 aa0.47□□□□□ -2.33
RNU4-28P-201ENST00000364739 GP1BAP07359 652 aa0.47□□□□□ -2.33
RNU4-28P-201ENST00000364739 CCDC172P0C7W6 258 aa0.47□□□□□ -2.33
RNU4-28P-201ENST00000364739 RAB8AP61006 207 aa0.47□□□□□ -2.33
RNU4-28P-201ENST00000364739 LCN8Q6JVE9 175 aa0.47□□□□□ -2.33
RNU4-28P-201ENST00000364739 KRTAP19-3Q7Z4W3 81 aa0.47□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms