RNA–Protein interactions for RNA: ENST00000361654.8

CLIP1-203, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 5,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-203ENST00000361654 PQLC2Q6ZP29 291 aa9.41□□□□□ -0.9
CLIP1-203ENST00000361654 OR4C5Q8NGB2 326 aa9.41□□□□□ -0.9
CLIP1-203ENST00000361654 OR8A1Q8NGG7 326 aa9.41□□□□□ -0.9
CLIP1-203ENST00000361654 MARVELD1Q9BSK0 173 aa9.41□□□□□ -0.9
CLIP1-203ENST00000361654 SVILO95425 2214 aa9.41□□□□□ -0.9
CLIP1-203ENST00000361654 LINC00862A6NCI5 91 aa9.41□□□□□ -0.9
CLIP1-203ENST00000361654 HMSDA8MTL9 139 aa9.41□□□□□ -0.9
CLIP1-203ENST00000361654 IGKV1D-16P01601 117 aa9.41□□□□□ -0.9
CLIP1-203ENST00000361654 VDAC2P45880 294 aaPredicted RBP9.41□□□□□ -0.9
CLIP1-203ENST00000361654 FAM209BQ5JX69 171 aa9.41□□□□□ -0.9
CLIP1-203ENST00000361654 CLEC9AQ6UXN8 241 aa9.41□□□□□ -0.9
CLIP1-203ENST00000361654 DYRK2Q92630 601 aa9.41□□□□□ -0.9
CLIP1-203ENST00000361654 DPH3P1Q9H4G8 78 aa9.41□□□□□ -0.9
CLIP1-203ENST00000361654 ZNF256Q9Y2P7 627 aaPredicted RBP9.41□□□□□ -0.9
CLIP1-203ENST00000361654 PPP1R17O96001 155 aa9.41□□□□□ -0.9
CLIP1-203ENST00000361654 PRSS2P07478 247 aa9.41□□□□□ -0.9
CLIP1-203ENST00000361654 HTN3P15516 51 aa9.41□□□□□ -0.9
CLIP1-203ENST00000361654 WDFY1Q8IWB7 410 aa9.41□□□□□ -0.9
CLIP1-203ENST00000361654 TMEM105Q8N8V8 129 aa9.41□□□□□ -0.9
CLIP1-203ENST00000361654 GEMIN7Q9H840 131 aaKnown RBP9.41□□□□□ -0.9
CLIP1-203ENST00000361654 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.41□□□□□ -0.9
CLIP1-203ENST00000361654 C19orf67A6NJJ6 358 aa9.41□□□□□ -0.9
CLIP1-203ENST00000361654 CEACAM4O75871 244 aa9.41□□□□□ -0.9
CLIP1-203ENST00000361654 SERF2P84101 59 aa9.41□□□□□ -0.9
CLIP1-203ENST00000361654 HIST1H1AQ02539 215 aaPredicted RBP9.41□□□□□ -0.9
CLIP1-203ENST00000361654 ZNF56Q15929 161 aa9.41□□□□□ -0.9
CLIP1-203ENST00000361654 ZNF383Q8NA42 475 aa9.41□□□□□ -0.9
CLIP1-203ENST00000361654 EP300Q09472 2414 aaPredicted RBP9.41□□□□□ -0.9
CLIP1-203ENST00000361654 MYOD1P15172 320 aa9.4□□□□□ -0.9
CLIP1-203ENST00000361654 OR5AU1Q8NGC0 362 aa9.4□□□□□ -0.9
CLIP1-203ENST00000361654 GPR82Q96P67 336 aa9.4□□□□□ -0.9
CLIP1-203ENST00000361654 NRIP2Q9BQI9 281 aa9.4□□□□□ -0.9
CLIP1-203ENST00000361654 ZFP30Q9Y2G7 519 aa9.4□□□□□ -0.9
CLIP1-203ENST00000361654 ZNF318Q5VUA4 2279 aa9.4□□□□□ -0.9
CLIP1-203ENST00000361654 TNRC6CQ9HCJ0 1690 aaKnown RBP9.4□□□□□ -0.9
CLIP1-203ENST00000361654 IGKV3OR2-268A0A0C4DH90 116 aa9.4□□□□□ -0.9
CLIP1-203ENST00000361654 ERVS71-1P61550 626 aa9.4□□□□□ -0.9
CLIP1-203ENST00000361654 FAM216AQ8WUB2 273 aa9.4□□□□□ -0.9
CLIP1-203ENST00000361654 G6PC2Q9NQR9 355 aa9.4□□□□□ -0.9
CLIP1-203ENST00000361654 OPN4Q9UHM6 478 aa9.4□□□□□ -0.9
CLIP1-203ENST00000361654 CABIN1Q9Y6J0 2220 aa9.4□□□□□ -0.9
CLIP1-203ENST00000361654 LOC105371267A0A1B0GV96 52 aa9.4□□□□□ -0.9
CLIP1-203ENST00000361654 TMEM238LA0A1B0GVL6 79 aa9.4□□□□□ -0.9
CLIP1-203ENST00000361654 A6NJY4 79 aa9.4□□□□□ -0.9
CLIP1-203ENST00000361654 MVDP53602 400 aa9.4□□□□□ -0.9
CLIP1-203ENST00000361654 MEIG1Q5JSS6 88 aa9.4□□□□□ -0.9
CLIP1-203ENST00000361654 CBLN4Q9NTU7 201 aa9.4□□□□□ -0.9
CLIP1-203ENST00000361654 DLL3Q9NYJ7 618 aa9.4□□□□□ -0.9
CLIP1-203ENST00000361654 BET1LQ9NYM9 111 aa9.4□□□□□ -0.9
CLIP1-203ENST00000361654 PGPA6NDG6 321 aa9.4□□□□□ -0.91
CLIP1-203ENST00000361654 KBTBD11O94819 623 aa9.4□□□□□ -0.91
CLIP1-203ENST00000361654 CKS2P33552 79 aa9.4□□□□□ -0.91
CLIP1-203ENST00000361654 CFHR1Q03591 330 aa9.4□□□□□ -0.91
CLIP1-203ENST00000361654 BSPH1Q075Z2 132 aa9.4□□□□□ -0.91
CLIP1-203ENST00000361654 PMS2P11Q13670 270 aa9.4□□□□□ -0.91
CLIP1-203ENST00000361654 MEGF10Q96KG7 1140 aa9.4□□□□□ -0.91
CLIP1-203ENST00000361654 KIR2DL4Q99706 377 aa9.4□□□□□ -0.91
CLIP1-203ENST00000361654 DSPPQ9NZW4 1301 aa9.4□□□□□ -0.91
CLIP1-203ENST00000361654 A0A1W2PRX2 142 aa9.39□□□□□ -0.91
CLIP1-203ENST00000361654 PTBP3O95758 552 aaKnown RBP9.39□□□□□ -0.91
CLIP1-203ENST00000361654 EFEMP2O95967 443 aa9.39□□□□□ -0.91
CLIP1-203ENST00000361654 CD99P14209 185 aa9.39□□□□□ -0.91
CLIP1-203ENST00000361654 BTF3P20290 206 aaKnown RBP9.39□□□□□ -0.91
CLIP1-203ENST00000361654 ZNF385CQ66K41 422 aaPredicted RBP9.39□□□□□ -0.91
CLIP1-203ENST00000361654 SPACA3Q8IXA5 215 aa9.39□□□□□ -0.91
CLIP1-203ENST00000361654 RAB24Q969Q5 203 aa9.39□□□□□ -0.91
CLIP1-203ENST00000361654 MED19A0JLT2 244 aaPredicted RBP9.39□□□□□ -0.91
CLIP1-203ENST00000361654 SGK494Q96LW2 274 aa9.39□□□□□ -0.91
CLIP1-203ENST00000361654 A6NDN8 102 aa9.39□□□□□ -0.91
CLIP1-203ENST00000361654 ZNF79Q15937 498 aa9.39□□□□□ -0.91
CLIP1-203ENST00000361654 ZIC4Q8N9L1 334 aa9.39□□□□□ -0.91
CLIP1-203ENST00000361654 OR4D11Q8NGI4 311 aa9.39□□□□□ -0.91
CLIP1-203ENST00000361654 ATG101Q9BSB4 218 aa9.39□□□□□ -0.91
CLIP1-203ENST00000361654 NEU3Q9UQ49 428 aa9.39□□□□□ -0.91
CLIP1-203ENST00000361654 ZNF831Q5JPB2 1677 aa9.39□□□□□ -0.91
CLIP1-203ENST00000361654 TMEM218A2RU14 115 aa9.39□□□□□ -0.91
CLIP1-203ENST00000361654 E9PLN8 166 aa9.39□□□□□ -0.91
CLIP1-203ENST00000361654 TM4SF5O14894 197 aa9.39□□□□□ -0.91
CLIP1-203ENST00000361654 GDF9O60383 454 aa9.39□□□□□ -0.91
CLIP1-203ENST00000361654 ERGP11308 486 aa9.39□□□□□ -0.91
CLIP1-203ENST00000361654 FSTP19883 344 aa9.39□□□□□ -0.91
CLIP1-203ENST00000361654 OR51G1Q8NGK1 321 aa9.39□□□□□ -0.91
CLIP1-203ENST00000361654 VKORC1Q9BQB6 163 aa9.39□□□□□ -0.91
CLIP1-203ENST00000361654 DNAJC4Q9NNZ3 241 aa9.39□□□□□ -0.91
CLIP1-203ENST00000361654 PLA2G10O15496 165 aa9.39□□□□□ -0.91
CLIP1-203ENST00000361654 DLX6P56179 175 aa9.39□□□□□ -0.91
CLIP1-203ENST00000361654 MESP2Q0VG99 397 aa9.39□□□□□ -0.91
CLIP1-203ENST00000361654 C2orf83Q53S99 150 aa9.39□□□□□ -0.91
CLIP1-203ENST00000361654 FAM90A26D6RGX4 464 aa9.38□□□□□ -0.91
CLIP1-203ENST00000361654 IL11P20809 199 aa9.38□□□□□ -0.91
CLIP1-203ENST00000361654 PPP1R27Q86WC6 154 aa9.38□□□□□ -0.91
CLIP1-203ENST00000361654 UBE2DNLQ8IWF7 75 aa9.38□□□□□ -0.91
CLIP1-203ENST00000361654 C19orf24Q9BVV8 132 aa9.38□□□□□ -0.91
CLIP1-203ENST00000361654 TRAV8-7A0A075B6U6 113 aa9.38□□□□□ -0.91
CLIP1-203ENST00000361654 PITX3O75364 302 aa9.38□□□□□ -0.91
CLIP1-203ENST00000361654 CD1AP06126 327 aa9.38□□□□□ -0.91
CLIP1-203ENST00000361654 SSTR5P35346 364 aa9.38□□□□□ -0.91
CLIP1-203ENST00000361654 MEF2CQ06413 473 aaPredicted RBP9.38□□□□□ -0.91
CLIP1-203ENST00000361654 LY6DQ14210 128 aa9.38□□□□□ -0.91
CLIP1-203ENST00000361654 GTSCR1Q86UQ5 136 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms