RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 HIST1H3AP68431 136 aa11.5□□□□□ -0.57
LDB3-202ENST00000361373 DGAT2L7PQ6IED9 249 aa11.5□□□□□ -0.57
LDB3-202ENST00000361373 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.5□□□□□ -0.57
LDB3-202ENST00000361373 FAM131CQ96AQ9 280 aa11.5□□□□□ -0.57
LDB3-202ENST00000361373 QTRT1Q9BXR0 403 aaKnown RBP11.5□□□□□ -0.57
LDB3-202ENST00000361373 ZNF430Q9H8G1 570 aaPredicted RBP11.5□□□□□ -0.57
LDB3-202ENST00000361373 KBTBD11O94819 623 aa11.5□□□□□ -0.57
LDB3-202ENST00000361373 OR10J1P30954 320 aa11.5□□□□□ -0.57
LDB3-202ENST00000361373 GLIPR1P48060 266 aa11.5□□□□□ -0.57
LDB3-202ENST00000361373 MRPL13Q9BYD1 178 aaKnown RBP11.5□□□□□ -0.57
LDB3-202ENST00000361373 A0A0G2JMM0 328 aa11.5□□□□□ -0.57
LDB3-202ENST00000361373 A0A1W2PPB8 328 aa11.5□□□□□ -0.57
LDB3-202ENST00000361373 A0A1W2PRS3 328 aa11.5□□□□□ -0.57
LDB3-202ENST00000361373 KIR3DP1A8MWS1 328 aa11.5□□□□□ -0.57
LDB3-202ENST00000361373 RNFT1Q5M7Z0 435 aa11.5□□□□□ -0.57
LDB3-202ENST00000361373 ACP7Q6ZNF0 438 aa11.5□□□□□ -0.57
LDB3-202ENST00000361373 MRPL30Q8TCC3 161 aaKnown RBP11.5□□□□□ -0.57
LDB3-202ENST00000361373 PXMP4Q9Y6I8 212 aa11.5□□□□□ -0.57
LDB3-202ENST00000361373 MARCH11A6NNE9 402 aa11.5□□□□□ -0.57
LDB3-202ENST00000361373 E9PLN8 166 aa11.5□□□□□ -0.57
LDB3-202ENST00000361373 NPIPB7O75200 414 aa11.5□□□□□ -0.57
LDB3-202ENST00000361373 NPBWR2P48146 333 aa11.5□□□□□ -0.57
LDB3-202ENST00000361373 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.5□□□□□ -0.57
LDB3-202ENST00000361373 VKORC1Q9BQB6 163 aa11.5□□□□□ -0.57
LDB3-202ENST00000361373 C19orf24Q9BVV8 132 aa11.5□□□□□ -0.57
LDB3-202ENST00000361373 NEURL1O76050 574 aa11.49□□□□□ -0.57
LDB3-202ENST00000361373 IGHV1-2P23083 117 aa11.49□□□□□ -0.57
LDB3-202ENST00000361373 CEBPDP49716 269 aaPredicted RBP11.49□□□□□ -0.57
LDB3-202ENST00000361373 FAM106AQ4KMX7 169 aa11.49□□□□□ -0.57
LDB3-202ENST00000361373 IGHV3-72A0A0B4J1Y9 119 aa11.49□□□□□ -0.57
LDB3-202ENST00000361373 IQCF6A8MYZ5 107 aa11.49□□□□□ -0.57
LDB3-202ENST00000361373 SLC25A17O43808 307 aa11.49□□□□□ -0.57
LDB3-202ENST00000361373 SRSF10O75494 262 aaKnown RBP11.49□□□□□ -0.57
LDB3-202ENST00000361373 LINC00271P0C7V0 271 aa11.49□□□□□ -0.57
LDB3-202ENST00000361373 SEMA5BQ9P283 1151 aa11.49□□□□□ -0.57
LDB3-202ENST00000361373 ANKRD36A6QL64 1941 aa11.49□□□□□ -0.57
LDB3-202ENST00000361373 MED19A0JLT2 244 aaPredicted RBP11.49□□□□□ -0.57
LDB3-202ENST00000361373 KIAA1324LA8MWY0 1029 aaPredicted RBP11.49□□□□□ -0.57
LDB3-202ENST00000361373 WNT9BO14905 357 aa11.49□□□□□ -0.57
LDB3-202ENST00000361373 ZNF735P0CB33 412 aa11.49□□□□□ -0.57
LDB3-202ENST00000361373 DCAF12L2Q5VW00 463 aa11.49□□□□□ -0.57
LDB3-202ENST00000361373 RTN4RL2Q86UN3 420 aa11.49□□□□□ -0.57
LDB3-202ENST00000361373 BPIFA4PQ86YQ2 179 aa11.49□□□□□ -0.57
LDB3-202ENST00000361373 C9orf106Q8NAJ2 232 aa11.49□□□□□ -0.57
LDB3-202ENST00000361373 GPR146Q96CH1 333 aa11.49□□□□□ -0.57
LDB3-202ENST00000361373 RSRP1Q9BUV0 290 aa11.49□□□□□ -0.57
LDB3-202ENST00000361373 MFSD2BA6NFX1 497 aa11.49□□□□□ -0.57
LDB3-202ENST00000361373 LAIR2Q6ISS4 152 aa11.49□□□□□ -0.57
LDB3-202ENST00000361373 RNASEKQ6P5S7 137 aaKnown RBP11.49□□□□□ -0.57
LDB3-202ENST00000361373 SELENOHQ8IZQ5 122 aaKnown RBP11.49□□□□□ -0.57
LDB3-202ENST00000361373 CHODLQ9H9P2 273 aa11.49□□□□□ -0.57
LDB3-202ENST00000361373 CAMPP49913 170 aa11.48□□□□□ -0.57
LDB3-202ENST00000361373 LAMTOR1Q6IAA8 161 aa11.48□□□□□ -0.57
LDB3-202ENST00000361373 EBLN2Q6P2I7 272 aa11.48□□□□□ -0.57
LDB3-202ENST00000361373 SPACA3Q8IXA5 215 aa11.48□□□□□ -0.57
LDB3-202ENST00000361373 RBKSQ9H477 322 aa11.48□□□□□ -0.57
LDB3-202ENST00000361373 PDCD11Q14690 1871 aaKnown RBP11.48□□□□□ -0.57
LDB3-202ENST00000361373 LINC00869P0C866 280 aa11.48□□□□□ -0.57
LDB3-202ENST00000361373 FAM24BQ8N5W8 94 aa11.48□□□□□ -0.57
LDB3-202ENST00000361373 LYRM2Q9NU23 88 aaPredicted RBP11.48□□□□□ -0.57
LDB3-202ENST00000361373 TEX50A0A1B0GTY4 177 aa11.48□□□□□ -0.57
LDB3-202ENST00000361373 PMCHP20382 165 aa11.48□□□□□ -0.57
LDB3-202ENST00000361373 TNFRSF9Q07011 255 aa11.48□□□□□ -0.57
LDB3-202ENST00000361373 BSPH1Q075Z2 132 aa11.48□□□□□ -0.57
LDB3-202ENST00000361373 ACACAQ13085 2346 aa11.48□□□□□ -0.57
LDB3-202ENST00000361373 NCOR1O75376 2440 aa11.48□□□□□ -0.57
LDB3-202ENST00000361373 SULT1A2P50226 295 aa11.48□□□□□ -0.57
LDB3-202ENST00000361373 SMAGPQ0VAQ4 97 aa11.48□□□□□ -0.57
LDB3-202ENST00000361373 ZNF146Q15072 292 aa11.48□□□□□ -0.57
LDB3-202ENST00000361373 IQCJQ1A5X6 159 aa11.48□□□□□ -0.57
LDB3-202ENST00000361373 OSR1Q8TAX0 266 aaPredicted RBP11.48□□□□□ -0.57
LDB3-202ENST00000361373 MTCL1Q9Y4B5 1905 aaKnown RBP11.48□□□□□ -0.57
LDB3-202ENST00000361373 MELTFP08582 738 aa11.47□□□□□ -0.57
LDB3-202ENST00000361373 RD3LP0DJH9 198 aa11.47□□□□□ -0.57
LDB3-202ENST00000361373 HIST1H1BP16401 226 aaKnown RBP11.47□□□□□ -0.57
LDB3-202ENST00000361373 G0S2P27469 103 aa11.47□□□□□ -0.57
LDB3-202ENST00000361373 PPOXP50336 477 aa11.47□□□□□ -0.57
LDB3-202ENST00000361373 UNC119Q13432 240 aa11.47□□□□□ -0.57
LDB3-202ENST00000361373 CHAC2Q8WUX2 184 aa11.47□□□□□ -0.57
LDB3-202ENST00000361373 LINC00052Q96N35 136 aa11.47□□□□□ -0.57
LDB3-202ENST00000361373 APELAP0DMC3 54 aa11.47□□□□□ -0.57
LDB3-202ENST00000361373 NHLH2Q02577 135 aa11.47□□□□□ -0.57
LDB3-202ENST00000361373 ASPHD2Q6ICH7 369 aa11.47□□□□□ -0.57
LDB3-202ENST00000361373 DPM3Q9P2X0 92 aa11.47□□□□□ -0.57
LDB3-202ENST00000361373 RAXQ9Y2V3 346 aa11.47□□□□□ -0.57
LDB3-202ENST00000361373 UFC1Q9Y3C8 167 aa11.47□□□□□ -0.57
LDB3-202ENST00000361373 C17orf100A8MU93 164 aa11.47□□□□□ -0.57
LDB3-202ENST00000361373 IL18BPO95998 194 aa11.47□□□□□ -0.57
LDB3-202ENST00000361373 PSG7Q13046 419 aa11.47□□□□□ -0.57
LDB3-202ENST00000361373 PNKDQ8N490 385 aa11.47□□□□□ -0.57
LDB3-202ENST00000361373 SMIM8Q96KF7 97 aa11.47□□□□□ -0.57
LDB3-202ENST00000361373 NPIPB11E5RHQ5 1161 aa11.47□□□□□ -0.57
LDB3-202ENST00000361373 ISLRO14498 428 aa11.47□□□□□ -0.57
LDB3-202ENST00000361373 BCL2P10415 239 aa11.47□□□□□ -0.57
LDB3-202ENST00000361373 IFITM3Q01628 133 aa11.47□□□□□ -0.57
LDB3-202ENST00000361373 TMEM78Q5T7P6 136 aa11.47□□□□□ -0.57
LDB3-202ENST00000361373 AQP10Q96PS8 301 aa11.47□□□□□ -0.57
LDB3-202ENST00000361373 TCF19Q9Y242 345 aa11.47□□□□□ -0.57
LDB3-202ENST00000361373 AWAT1Q58HT5 328 aa11.46□□□□□ -0.57
LDB3-202ENST00000361373 TAF15Q92804 592 aaKnown RBP eCLIP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms