RNA–Protein interactions for RNA: ENST00000361125.1

SMURF1-201, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene SMURF1, Length 5,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-201ENST00000361125 NR2C2APQ86WQ0 139 aa18.03■□□□□ 0.48
SMURF1-201ENST00000361125 PGA5P0DJD9 388 aa18.03■□□□□ 0.48
SMURF1-201ENST00000361125 HIST1H1BP16401 226 aaKnown RBP18.03■□□□□ 0.48
SMURF1-201ENST00000361125 ACSF3Q4G176 576 aaPredicted RBP18.03■□□□□ 0.48
SMURF1-201ENST00000361125 VPS25Q9BRG1 176 aa18.03■□□□□ 0.48
SMURF1-201ENST00000361125 SMPD2O60906 423 aa18.03■□□□□ 0.48
SMURF1-201ENST00000361125 ZNF818PQ6ZRF7 136 aa18.03■□□□□ 0.48
SMURF1-201ENST00000361125 OR5P3Q8WZ94 311 aa18.03■□□□□ 0.48
SMURF1-201ENST00000361125 TMEM140Q9NV12 185 aa18.03■□□□□ 0.48
SMURF1-201ENST00000361125 SLC25A17O43808 307 aa18.02■□□□□ 0.48
SMURF1-201ENST00000361125 CD8AP01732 235 aa18.02■□□□□ 0.48
SMURF1-201ENST00000361125 REG1AP05451 166 aa18.02■□□□□ 0.48
SMURF1-201ENST00000361125 LRP11Q86VZ4 500 aa18.02■□□□□ 0.48
SMURF1-201ENST00000361125 SAXO1Q8IYX7 474 aa18.02■□□□□ 0.48
SMURF1-201ENST00000361125 H1FOOQ8IZA3 346 aaPredicted RBP18.02■□□□□ 0.48
SMURF1-201ENST00000361125 POM121Q96HA1 1249 aa18.02■□□□□ 0.48
SMURF1-201ENST00000361125 PIMREGQ9BSJ6 248 aa18.02■□□□□ 0.48
SMURF1-201ENST00000361125 IGLV3-19P01714 112 aa18.02■□□□□ 0.48
SMURF1-201ENST00000361125 PITPNC1Q9UKF7 332 aa18.02■□□□□ 0.48
SMURF1-201ENST00000361125 WNT9BO14905 357 aa18.02■□□□□ 0.48
SMURF1-201ENST00000361125 APCSP02743 223 aa18.02■□□□□ 0.48
SMURF1-201ENST00000361125 ID1P41134 155 aa18.02■□□□□ 0.48
SMURF1-201ENST00000361125 UNC119Q13432 240 aa18.02■□□□□ 0.48
SMURF1-201ENST00000361125 BCL2P10415 239 aa18.02■□□□□ 0.47
SMURF1-201ENST00000361125 ABHD12Q8N2K0 398 aa18.02■□□□□ 0.47
SMURF1-201ENST00000361125 SNURFLB1AK76 121 aa18.01■□□□□ 0.47
SMURF1-201ENST00000361125 PF4V1P10720 104 aa18.01■□□□□ 0.47
SMURF1-201ENST00000361125 ID4P47928 161 aa18.01■□□□□ 0.47
SMURF1-201ENST00000361125 PAFAH1B2P68402 229 aa18.01■□□□□ 0.47
SMURF1-201ENST00000361125 DGAT2L7PQ6IED9 249 aa18.01■□□□□ 0.47
SMURF1-201ENST00000361125 TCTEX1D1Q8N7M0 179 aa18.01■□□□□ 0.47
SMURF1-201ENST00000361125 C9orf172C9J069 976 aa18.01■□□□□ 0.47
SMURF1-201ENST00000361125 S1PR2O95136 353 aa18.01■□□□□ 0.47
SMURF1-201ENST00000361125 BTCP35070 178 aa18.01■□□□□ 0.47
SMURF1-201ENST00000361125 TMEM105Q8N8V8 129 aa18.01■□□□□ 0.47
SMURF1-201ENST00000361125 LYRM2Q9NU23 88 aaPredicted RBP18.01■□□□□ 0.47
SMURF1-201ENST00000361125 UNC13CQ8NB66 2214 aa18.01■□□□□ 0.47
SMURF1-201ENST00000361125 IGHV3OR16-10A0A075B7F0 116 aa18.01■□□□□ 0.47
SMURF1-201ENST00000361125 DLL1O00548 723 aa18.01■□□□□ 0.47
SMURF1-201ENST00000361125 RHOVQ96L33 236 aa18.01■□□□□ 0.47
SMURF1-201ENST00000361125 CGB1A6NKQ9 187 aa18.01■□□□□ 0.47
SMURF1-201ENST00000361125 MPTX1A8MV57 137 aa18.01■□□□□ 0.47
SMURF1-201ENST00000361125 RPS11P62280 158 aaKnown RBP eCLIP18.01■□□□□ 0.47
SMURF1-201ENST00000361125 HIST3H3Q16695 136 aa18.01■□□□□ 0.47
SMURF1-201ENST00000361125 IZUMO4Q1ZYL8 232 aa18.01■□□□□ 0.47
SMURF1-201ENST00000361125 IGHV1-69-2A0A0G2JMI3 117 aa18.01■□□□□ 0.47
SMURF1-201ENST00000361125 LINC00869P0C866 280 aa18.01■□□□□ 0.47
SMURF1-201ENST00000361125 FAM27E3Q08E93 113 aa18.01■□□□□ 0.47
SMURF1-201ENST00000361125 LY6EQ16553 131 aa18.01■□□□□ 0.47
SMURF1-201ENST00000361125 OR4A5Q8NH83 315 aa18.01■□□□□ 0.47
SMURF1-201ENST00000361125 GSX1Q9H4S2 264 aaPredicted RBP18.01■□□□□ 0.47
SMURF1-201ENST00000361125 EIF3GO75821 320 aaKnown RBP eCLIP18■□□□□ 0.47
SMURF1-201ENST00000361125 SNCGO76070 127 aa18■□□□□ 0.47
SMURF1-201ENST00000361125 MMP9P14780 707 aa18■□□□□ 0.47
SMURF1-201ENST00000361125 Q6ZT83 130 aa18■□□□□ 0.47
SMURF1-201ENST00000361125 MIC13Q5XKP0 118 aa18■□□□□ 0.47
SMURF1-201ENST00000361125 UNQ5815/PRO19632Q6UWF5 114 aa18■□□□□ 0.47
SMURF1-201ENST00000361125 ZIC3O60481 467 aa18■□□□□ 0.47
SMURF1-201ENST00000361125 SSTR5P35346 364 aa18■□□□□ 0.47
SMURF1-201ENST00000361125 C2orf68Q2NKX9 166 aa18■□□□□ 0.47
SMURF1-201ENST00000361125 ASPHD2Q6ICH7 369 aa18■□□□□ 0.47
SMURF1-201ENST00000361125 SLC35E4Q6ICL7 350 aa18■□□□□ 0.47
SMURF1-201ENST00000361125 ZMAT5Q9UDW3 170 aaKnown RBP18■□□□□ 0.47
SMURF1-201ENST00000361125 ARID1AO14497 2285 aa18■□□□□ 0.47
SMURF1-201ENST00000361125 TMEM14DPA8MWL7 114 aa18■□□□□ 0.47
SMURF1-201ENST00000361125 ZG16O60844 167 aa18■□□□□ 0.47
SMURF1-201ENST00000361125 RPL13AP40429 203 aaKnown RBP18■□□□□ 0.47
SMURF1-201ENST00000361125 PKIAP61925 76 aa18■□□□□ 0.47
SMURF1-201ENST00000361125 MRPL37Q9BZE1 423 aaKnown RBP18■□□□□ 0.47
SMURF1-201ENST00000361125 M0R143 59 aa17.99■□□□□ 0.47
SMURF1-201ENST00000361125 RPL7P18124 248 aaKnown RBP17.99■□□□□ 0.47
SMURF1-201ENST00000361125 KLK2P20151 261 aa17.99■□□□□ 0.47
SMURF1-201ENST00000361125 NUBP1P53384 320 aa17.99■□□□□ 0.47
SMURF1-201ENST00000361125 MDKP21741 143 aaPredicted RBP17.99■□□□□ 0.47
SMURF1-201ENST00000361125 KLRB1Q12918 225 aa17.99■□□□□ 0.47
SMURF1-201ENST00000361125 IL19Q9UHD0 177 aa17.99■□□□□ 0.47
SMURF1-201ENST00000361125 LINC00518Q8N0U6 118 aa17.99■□□□□ 0.47
SMURF1-201ENST00000361125 HOXA6P31267 233 aa17.99■□□□□ 0.47
SMURF1-201ENST00000361125 TMEM45BQ96B21 275 aa17.99■□□□□ 0.47
SMURF1-201ENST00000361125 SLC35B1P78383 322 aa17.99■□□□□ 0.47
SMURF1-201ENST00000361125 SERF2P84101 59 aa17.99■□□□□ 0.47
SMURF1-201ENST00000361125 C1QL2Q7Z5L3 287 aa17.98■□□□□ 0.47
SMURF1-201ENST00000361125 DCAF16Q9NXF7 216 aa17.98■□□□□ 0.47
SMURF1-201ENST00000361125 LOC105371242A0A075B767 164 aa17.98■□□□□ 0.47
SMURF1-201ENST00000361125 POC1AQ8NBT0 407 aa17.98■□□□□ 0.47
SMURF1-201ENST00000361125 ZNRF1Q8ND25 227 aa17.98■□□□□ 0.47
SMURF1-201ENST00000361125 ZCCHC14Q8WYQ9 949 aaKnown RBP17.98■□□□□ 0.47
SMURF1-201ENST00000361125 LINC00470Q9BZP3 86 aa17.98■□□□□ 0.47
SMURF1-201ENST00000361125 PIKFYVEQ9Y2I7 2098 aa17.98■□□□□ 0.47
SMURF1-201ENST00000361125 SYNGR3O43761 229 aa17.98■□□□□ 0.47
SMURF1-201ENST00000361125 NDUFB4O95168 129 aa17.98■□□□□ 0.47
SMURF1-201ENST00000361125 ZNF735P0CB33 412 aa17.98■□□□□ 0.47
SMURF1-201ENST00000361125 EIF4E3Q8N5X7 224 aaKnown RBP17.98■□□□□ 0.47
SMURF1-201ENST00000361125 SH3BGRL3Q9H299 93 aa17.98■□□□□ 0.47
SMURF1-201ENST00000361125 LOC389332A0A1B0GUA5 103 aa17.98■□□□□ 0.47
SMURF1-201ENST00000361125 NDUFA2O43678 99 aa17.98■□□□□ 0.47
SMURF1-201ENST00000361125 CALHM1Q8IU99 346 aa17.98■□□□□ 0.47
SMURF1-201ENST00000361125 MAP1LC3CQ9BXW4 147 aa17.98■□□□□ 0.47
SMURF1-201ENST00000361125 UMODP07911 640 aa17.97■□□□□ 0.47
SMURF1-201ENST00000361125 ELOBQ15370 118 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms