RNA–Protein interactions for RNA: ENST00000360495.9

CCDC144A-203, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,545 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-203ENST00000360495 SMIM8Q96KF7 97 aa11.56□□□□□ -0.56
CCDC144A-203ENST00000360495 F2RL2O00254 374 aa11.56□□□□□ -0.56
CCDC144A-203ENST00000360495 RAMP1O60894 148 aa11.56□□□□□ -0.56
CCDC144A-203ENST00000360495 RELQ04864 619 aaPredicted RBP11.56□□□□□ -0.56
CCDC144A-203ENST00000360495 RHBDD2Q6NTF9 364 aa11.56□□□□□ -0.56
CCDC144A-203ENST00000360495 PLSCR2Q9NRY7 297 aa11.56□□□□□ -0.56
CCDC144A-203ENST00000360495 CEACAM21Q3KPI0 293 aa11.56□□□□□ -0.56
CCDC144A-203ENST00000360495 COPS9Q8WXC6 57 aa11.56□□□□□ -0.56
CCDC144A-203ENST00000360495 R4GN57 208 aa11.56□□□□□ -0.56
CCDC144A-203ENST00000360495 DXOO77932 396 aaKnown RBP11.56□□□□□ -0.56
CCDC144A-203ENST00000360495 IGKV1D-16P01601 117 aa11.56□□□□□ -0.56
CCDC144A-203ENST00000360495 GCHFRP30047 84 aa11.56□□□□□ -0.56
CCDC144A-203ENST00000360495 RPL27AP46776 148 aaKnown RBP11.56□□□□□ -0.56
CCDC144A-203ENST00000360495 DLX6P56179 175 aa11.56□□□□□ -0.56
CCDC144A-203ENST00000360495 ZNF385AQ96PM9 386 aaKnown RBP11.56□□□□□ -0.56
CCDC144A-203ENST00000360495 AGFG2O95081 481 aa11.55□□□□□ -0.56
CCDC144A-203ENST00000360495 BHLHA15Q7RTS1 189 aaPredicted RBP11.55□□□□□ -0.56
CCDC144A-203ENST00000360495 MARS2Q96GW9 593 aaKnown RBP11.55□□□□□ -0.56
CCDC144A-203ENST00000360495 VCX2Q9H322 139 aa11.55□□□□□ -0.56
CCDC144A-203ENST00000360495 CLEC1BQ9P126 229 aa11.55□□□□□ -0.56
CCDC144A-203ENST00000360495 MAP1BP46821 2468 aaKnown RBP11.55□□□□□ -0.56
CCDC144A-203ENST00000360495 SLC17A3O00476 420 aa11.55□□□□□ -0.56
CCDC144A-203ENST00000360495 ZIC3O60481 467 aa11.55□□□□□ -0.56
CCDC144A-203ENST00000360495 DNAL4O96015 105 aa11.55□□□□□ -0.56
CCDC144A-203ENST00000360495 ZP4Q12836 540 aa11.55□□□□□ -0.56
CCDC144A-203ENST00000360495 Q6ZS52 159 aa11.55□□□□□ -0.56
CCDC144A-203ENST00000360495 OR4C13Q8NGP0 309 aa11.55□□□□□ -0.56
CCDC144A-203ENST00000360495 RAB1CQ92928 201 aa11.55□□□□□ -0.56
CCDC144A-203ENST00000360495 ZNF714Q96N38 554 aa11.55□□□□□ -0.56
CCDC144A-203ENST00000360495 WFDC6Q9BQY6 131 aa11.55□□□□□ -0.56
CCDC144A-203ENST00000360495 ANAPC13Q9BS18 74 aa11.55□□□□□ -0.56
CCDC144A-203ENST00000360495 RGPD5Q99666 1765 aa11.55□□□□□ -0.56
CCDC144A-203ENST00000360495 K7N7A8 449 aa11.55□□□□□ -0.56
CCDC144A-203ENST00000360495 ID1P41134 155 aa11.55□□□□□ -0.56
CCDC144A-203ENST00000360495 CA7P43166 264 aa11.55□□□□□ -0.56
CCDC144A-203ENST00000360495 RND2P52198 227 aa11.55□□□□□ -0.56
CCDC144A-203ENST00000360495 C3AR1Q16581 482 aa11.55□□□□□ -0.56
CCDC144A-203ENST00000360495 SPINK14Q6IE38 97 aa11.55□□□□□ -0.56
CCDC144A-203ENST00000360495 C5orf30Q96GV9 206 aa11.55□□□□□ -0.56
CCDC144A-203ENST00000360495 PHF7Q9BWX1 381 aaPredicted RBP11.55□□□□□ -0.56
CCDC144A-203ENST00000360495 RTN4RQ9BZR6 473 aa11.55□□□□□ -0.56
CCDC144A-203ENST00000360495 TNFRSF19Q9NS68 423 aa11.55□□□□□ -0.56
CCDC144A-203ENST00000360495 HILPDAQ9Y5L2 63 aa11.55□□□□□ -0.56
CCDC144A-203ENST00000360495 DDX60LQ5H9U9 1706 aaKnown RBP11.55□□□□□ -0.56
CCDC144A-203ENST00000360495 PHIPQ8WWQ0 1821 aa11.55□□□□□ -0.56
CCDC144A-203ENST00000360495 SRFP11831 508 aa11.55□□□□□ -0.56
CCDC144A-203ENST00000360495 PRDX2P32119 198 aa11.55□□□□□ -0.56
CCDC144A-203ENST00000360495 ECSCRQ19T08 205 aa11.55□□□□□ -0.56
CCDC144A-203ENST00000360495 ANKRD33Q7Z3H0 272 aa11.55□□□□□ -0.56
CCDC144A-203ENST00000360495 FAM19A2Q8N3H0 131 aa11.55□□□□□ -0.56
CCDC144A-203ENST00000360495 IGHV4-34P06331 123 aa11.55□□□□□ -0.56
CCDC144A-203ENST00000360495 TRA2AQ13595 282 aaKnown RBP eCLIP11.55□□□□□ -0.56
CCDC144A-203ENST00000360495 C18orf15Q96N68 181 aa11.55□□□□□ -0.56
CCDC144A-203ENST00000360495 SIGMAR1Q99720 223 aa11.55□□□□□ -0.56
CCDC144A-203ENST00000360495 DRD3P35462 400 aa11.54□□□□□ -0.56
CCDC144A-203ENST00000360495 SSPNQ14714 243 aa11.54□□□□□ -0.56
CCDC144A-203ENST00000360495 TMEM52Q8NDY8 209 aa11.54□□□□□ -0.56
CCDC144A-203ENST00000360495 RNF222A6NCQ9 220 aa11.54□□□□□ -0.56
CCDC144A-203ENST00000360495 SHISA7A6NL88 538 aa11.54□□□□□ -0.56
CCDC144A-203ENST00000360495 P2RY6Q15077 328 aa11.54□□□□□ -0.56
CCDC144A-203ENST00000360495 HCP5Q6MZN7 132 aa11.54□□□□□ -0.56
CCDC144A-203ENST00000360495 OR2H2O95918 312 aa11.54□□□□□ -0.56
CCDC144A-203ENST00000360495 IL11P20809 199 aa11.54□□□□□ -0.56
CCDC144A-203ENST00000360495 GAB4Q2WGN9 574 aa11.54□□□□□ -0.56
CCDC144A-203ENST00000360495 FAM27BQ5VT28 67 aa11.54□□□□□ -0.56
CCDC144A-203ENST00000360495 OR4A5Q8NH83 315 aa11.54□□□□□ -0.56
CCDC144A-203ENST00000360495 FNDC4Q9H6D8 234 aaPredicted RBP11.54□□□□□ -0.56
CCDC144A-203ENST00000360495 WDR54Q9H977 334 aa11.54□□□□□ -0.56
CCDC144A-203ENST00000360495 FAM90A10PA6NDY2 464 aa11.54□□□□□ -0.56
CCDC144A-203ENST00000360495 FAM90A18PA6NE21 464 aa11.54□□□□□ -0.56
CCDC144A-203ENST00000360495 FAM90A16PA6NEW6 464 aa11.54□□□□□ -0.56
CCDC144A-203ENST00000360495 FAM90A20PA6NIJ5 464 aa11.54□□□□□ -0.56
CCDC144A-203ENST00000360495 FAM90A8PA6NJQ4 464 aa11.54□□□□□ -0.56
CCDC144A-203ENST00000360495 FAM90A7PA6NKC0 464 aa11.54□□□□□ -0.56
CCDC144A-203ENST00000360495 A6NNC1 897 aa11.54□□□□□ -0.56
CCDC144A-203ENST00000360495 FAM90A22PA8MWA6 464 aa11.54□□□□□ -0.56
CCDC144A-203ENST00000360495 FAM90A12PA8MX19 464 aa11.54□□□□□ -0.56
CCDC144A-203ENST00000360495 FAM90A5PA8MXJ8 464 aa11.54□□□□□ -0.56
CCDC144A-203ENST00000360495 FAM90A23PA8MXZ1 464 aa11.54□□□□□ -0.56
CCDC144A-203ENST00000360495 FAM90A15PP0C7V4 464 aa11.54□□□□□ -0.56
CCDC144A-203ENST00000360495 FAM90A13PP0C7W8 464 aa11.54□□□□□ -0.56
CCDC144A-203ENST00000360495 FAM90A14PP0C7W9 464 aa11.54□□□□□ -0.56
CCDC144A-203ENST00000360495 FAM90A24PP0C7X0 464 aa11.54□□□□□ -0.56
CCDC144A-203ENST00000360495 MEIG1Q5JSS6 88 aa11.54□□□□□ -0.56
CCDC144A-203ENST00000360495 ZNF818PQ6ZRF7 136 aa11.54□□□□□ -0.56
CCDC144A-203ENST00000360495 SYT8Q8NBV8 401 aa11.54□□□□□ -0.56
CCDC144A-203ENST00000360495 OR10J6PQ8NGY7 276 aa11.54□□□□□ -0.56
CCDC144A-203ENST00000360495 TBX6O95947 436 aaPredicted RBP11.53□□□□□ -0.56
CCDC144A-203ENST00000360495 GPR183P32249 361 aa11.53□□□□□ -0.56
CCDC144A-203ENST00000360495 RPL31P62899 125 aaKnown RBP11.53□□□□□ -0.56
CCDC144A-203ENST00000360495 CX3CL1P78423 397 aa11.53□□□□□ -0.56
CCDC144A-203ENST00000360495 ASCL5Q7RTU5 278 aa11.53□□□□□ -0.56
CCDC144A-203ENST00000360495 C9orf40Q8IXQ3 194 aa11.53□□□□□ -0.56
CCDC144A-203ENST00000360495 EAF1Q96JC9 268 aaPredicted RBP11.53□□□□□ -0.56
CCDC144A-203ENST00000360495 SDF2L1Q9HCN8 221 aa11.53□□□□□ -0.56
CCDC144A-203ENST00000360495 SERF1AO75920 110 aa11.53□□□□□ -0.56
CCDC144A-203ENST00000360495 TMEM240Q5SV17 173 aa11.53□□□□□ -0.56
CCDC144A-203ENST00000360495 PHLDA3Q9Y5J5 127 aa11.53□□□□□ -0.56
CCDC144A-203ENST00000360495 ALS2Q96Q42 1657 aa11.53□□□□□ -0.56
CCDC144A-203ENST00000360495 SHISA3A0PJX4 238 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms