RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 TRAT1Q6PIZ9 186 aa9.42□□□□□ -0.9
SSU72-202ENST00000359060 WDR82Q6UXN9 313 aa9.42□□□□□ -0.9
SSU72-202ENST00000359060 TCEAL7Q9BRU2 100 aa9.42□□□□□ -0.9
SSU72-202ENST00000359060 EGLN1Q9GZT9 426 aa9.42□□□□□ -0.9
SSU72-202ENST00000359060 METRNQ9UJH8 293 aa9.42□□□□□ -0.9
SSU72-202ENST00000359060 A0A1W2PPQ1 181 aa9.41□□□□□ -0.9
SSU72-202ENST00000359060 PPP1R2P9O14990 202 aa9.41□□□□□ -0.9
SSU72-202ENST00000359060 ATXN7O15265 892 aaPredicted RBP9.41□□□□□ -0.9
SSU72-202ENST00000359060 MT-CO2P00403 227 aa9.41□□□□□ -0.9
SSU72-202ENST00000359060 RD3LP0DJH9 198 aa9.41□□□□□ -0.9
SSU72-202ENST00000359060 FAM27E3Q08E93 113 aa9.41□□□□□ -0.9
SSU72-202ENST00000359060 SLC35E4Q6ICL7 350 aa9.41□□□□□ -0.9
SSU72-202ENST00000359060 WDR86Q86TI4 376 aa9.41□□□□□ -0.9
SSU72-202ENST00000359060 CCL13Q99616 98 aa9.41□□□□□ -0.9
SSU72-202ENST00000359060 PATZ1Q9HBE1 687 aaKnown RBP9.41□□□□□ -0.9
SSU72-202ENST00000359060 MARCH11A6NNE9 402 aa9.41□□□□□ -0.9
SSU72-202ENST00000359060 CD55P08174 381 aa9.41□□□□□ -0.9
SSU72-202ENST00000359060 BCL2P10415 239 aa9.41□□□□□ -0.9
SSU72-202ENST00000359060 EIF2S3P41091 472 aaKnown RBP9.41□□□□□ -0.9
SSU72-202ENST00000359060 TMEM108Q6UXF1 575 aa9.41□□□□□ -0.9
SSU72-202ENST00000359060 LRP11Q86VZ4 500 aa9.41□□□□□ -0.9
SSU72-202ENST00000359060 RNF7Q9UBF6 113 aa9.41□□□□□ -0.9
SSU72-202ENST00000359060 COL5A1P20908 1838 aaPredicted RBP9.41□□□□□ -0.9
SSU72-202ENST00000359060 ZNF98A6NK75 572 aa9.41□□□□□ -0.9
SSU72-202ENST00000359060 CLDN34H7C241 214 aa9.41□□□□□ -0.9
SSU72-202ENST00000359060 MDKP21741 143 aaPredicted RBP9.41□□□□□ -0.9
SSU72-202ENST00000359060 CDC34P49427 236 aaPredicted RBP9.41□□□□□ -0.9
SSU72-202ENST00000359060 TMEM41BQ5BJD5 291 aa9.41□□□□□ -0.9
SSU72-202ENST00000359060 SSMEM1Q8WWF3 244 aa9.41□□□□□ -0.9
SSU72-202ENST00000359060 CLCF1Q9UBD9 225 aa9.41□□□□□ -0.9
SSU72-202ENST00000359060 MLNRO43193 412 aa9.4□□□□□ -0.9
SSU72-202ENST00000359060 WISP2O76076 250 aa9.4□□□□□ -0.9
SSU72-202ENST00000359060 IGKV1-5P01602 117 aa9.4□□□□□ -0.9
SSU72-202ENST00000359060 SERF2P84101 59 aa9.4□□□□□ -0.9
SSU72-202ENST00000359060 ZNF146Q15072 292 aa9.4□□□□□ -0.9
SSU72-202ENST00000359060 MALSU1Q96EH3 234 aa9.4□□□□□ -0.9
SSU72-202ENST00000359060 RCC1LQ96I51 464 aaKnown RBP9.4□□□□□ -0.9
SSU72-202ENST00000359060 AURKAIP1Q9NWT8 199 aaPredicted RBP9.4□□□□□ -0.9
SSU72-202ENST00000359060 VAX2Q9UIW0 290 aa9.4□□□□□ -0.9
SSU72-202ENST00000359060 YLPM1P49750 1951 aaKnown RBP9.4□□□□□ -0.9
SSU72-202ENST00000359060 ATP6V1FQ16864 119 aa9.4□□□□□ -0.9
SSU72-202ENST00000359060 KRTAP27-1Q3LI81 207 aa9.4□□□□□ -0.9
SSU72-202ENST00000359060 RPL39P5Q59GN2 51 aa9.4□□□□□ -0.9
SSU72-202ENST00000359060 C1orf185Q5T7R7 199 aa9.4□□□□□ -0.9
SSU72-202ENST00000359060 ZNF343Q6P1L6 599 aa9.4□□□□□ -0.9
SSU72-202ENST00000359060 Q6ZS49 121 aa9.4□□□□□ -0.9
SSU72-202ENST00000359060 NGBQ9NPG2 151 aa9.4□□□□□ -0.9
SSU72-202ENST00000359060 TRGV8A0A0C4DH27 118 aa9.4□□□□□ -0.91
SSU72-202ENST00000359060 PAGE4O60829 102 aa9.4□□□□□ -0.91
SSU72-202ENST00000359060 CYB5R3P00387 301 aaPredicted RBP9.4□□□□□ -0.91
SSU72-202ENST00000359060 GYPAP02724 150 aa9.4□□□□□ -0.91
SSU72-202ENST00000359060 RBPJQ06330 500 aa9.4□□□□□ -0.91
SSU72-202ENST00000359060 MRGPRGQ86SM5 289 aa9.4□□□□□ -0.91
SSU72-202ENST00000359060 OR10X1Q8NGY0 326 aa9.4□□□□□ -0.91
SSU72-202ENST00000359060 RND1Q92730 232 aa9.4□□□□□ -0.91
SSU72-202ENST00000359060 PARD6AQ9NPB6 346 aa9.4□□□□□ -0.91
SSU72-202ENST00000359060 DMDP11532 3685 aa9.39□□□□□ -0.91
SSU72-202ENST00000359060 IGHV1-18A0A0C4DH31 117 aa9.39□□□□□ -0.91
SSU72-202ENST00000359060 PPP5D1E7EU14 171 aa9.39□□□□□ -0.91
SSU72-202ENST00000359060 APOA2P02652 100 aa9.39□□□□□ -0.91
SSU72-202ENST00000359060 HSPB1P04792 205 aaKnown RBP9.39□□□□□ -0.91
SSU72-202ENST00000359060 TNFRSF1AP19438 455 aa9.39□□□□□ -0.91
SSU72-202ENST00000359060 SRSF7Q16629 238 aaKnown RBP eCLIP9.39□□□□□ -0.91
SSU72-202ENST00000359060 TMEM241Q24JQ0 296 aa9.39□□□□□ -0.91
SSU72-202ENST00000359060 ZNF525Q8N782 197 aa9.39□□□□□ -0.91
SSU72-202ENST00000359060 OR13D1Q8NGV5 346 aa9.39□□□□□ -0.91
SSU72-202ENST00000359060 TMPRSS5Q9H3S3 457 aa9.39□□□□□ -0.91
SSU72-202ENST00000359060 MEOX2P50222 304 aa9.39□□□□□ -0.91
SSU72-202ENST00000359060 RPL30P62888 115 aaKnown RBP9.39□□□□□ -0.91
SSU72-202ENST00000359060 RTL8BQ17RB0 113 aa9.39□□□□□ -0.91
SSU72-202ENST00000359060 Q6ZPA2 131 aa9.39□□□□□ -0.91
SSU72-202ENST00000359060 OR4S2Q8NH73 311 aa9.39□□□□□ -0.91
SSU72-202ENST00000359060 FAM210BQ96KR6 192 aa9.39□□□□□ -0.91
SSU72-202ENST00000359060 RHOVQ96L33 236 aa9.39□□□□□ -0.91
SSU72-202ENST00000359060 VSIRQ9H7M9 311 aa9.39□□□□□ -0.91
SSU72-202ENST00000359060 ZNF880Q6PDB4 577 aa9.39□□□□□ -0.91
SSU72-202ENST00000359060 SNX22Q96L94 193 aa9.39□□□□□ -0.91
SSU72-202ENST00000359060 WDR61Q9GZS3 305 aaKnown RBP9.39□□□□□ -0.91
SSU72-202ENST00000359060 SMDT1Q9H4I9 107 aa9.39□□□□□ -0.91
SSU72-202ENST00000359060 PLA2G2EQ9NZK7 142 aa9.39□□□□□ -0.91
SSU72-202ENST00000359060 SRP19P09132 144 aaKnown RBP9.38□□□□□ -0.91
SSU72-202ENST00000359060 WT1P19544 449 aaPredicted RBP9.38□□□□□ -0.91
SSU72-202ENST00000359060 RAB7AP51149 207 aa9.38□□□□□ -0.91
SSU72-202ENST00000359060 ZNF66Q6ZN08 573 aa9.38□□□□□ -0.91
SSU72-202ENST00000359060 LRFN3Q9BTN0 628 aa9.38□□□□□ -0.91
SSU72-202ENST00000359060 COMMD5Q9GZQ3 224 aa9.38□□□□□ -0.91
SSU72-202ENST00000359060 CALYQ9NYX4 217 aa9.38□□□□□ -0.91
SSU72-202ENST00000359060 S100A8P05109 93 aa9.38□□□□□ -0.91
SSU72-202ENST00000359060 SELLP14151 372 aa9.38□□□□□ -0.91
SSU72-202ENST00000359060 CHRNA7P36544 502 aa9.38□□□□□ -0.91
SSU72-202ENST00000359060 C1orf162Q8NEQ5 155 aaPredicted RBP9.38□□□□□ -0.91
SSU72-202ENST00000359060 CEP295Q9C0D2 2601 aa9.38□□□□□ -0.91
SSU72-202ENST00000359060 KIAA1324LA8MWY0 1029 aaPredicted RBP9.38□□□□□ -0.91
SSU72-202ENST00000359060 RAB4BP61018 213 aa9.38□□□□□ -0.91
SSU72-202ENST00000359060 PLGLAQ15195 96 aa9.38□□□□□ -0.91
SSU72-202ENST00000359060 LINC00518Q8N0U6 118 aa9.38□□□□□ -0.91
SSU72-202ENST00000359060 STARD4Q96DR4 205 aa9.38□□□□□ -0.91
SSU72-202ENST00000359060 TMEM204Q9BSN7 226 aa9.38□□□□□ -0.91
SSU72-202ENST00000359060 CTXND1A0A1B0GTU2 59 aa9.38□□□□□ -0.91
SSU72-202ENST00000359060 MDFIC2A0A1B0GVS7 189 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms