RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 CYTL1Q9NRR1 136 aa10.61□□□□□ -0.71
GGPS1-202ENST00000358966 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.6□□□□□ -0.71
GGPS1-202ENST00000358966 UMAD1C9J7I0 102 aa10.6□□□□□ -0.71
GGPS1-202ENST00000358966 OR8U9P0C7N5 309 aa10.6□□□□□ -0.71
GGPS1-202ENST00000358966 GLRXP35754 106 aa10.6□□□□□ -0.71
GGPS1-202ENST00000358966 C11orf42Q8N5U0 333 aa10.6□□□□□ -0.71
GGPS1-202ENST00000358966 OR8U1Q8NH10 309 aa10.6□□□□□ -0.71
GGPS1-202ENST00000358966 ITLN1Q8WWA0 313 aa10.6□□□□□ -0.71
GGPS1-202ENST00000358966 OR2S2Q9NQN1 319 aa10.6□□□□□ -0.71
GGPS1-202ENST00000358966 URGCP-MRPS24S4R325 110 aa10.6□□□□□ -0.71
GGPS1-202ENST00000358966 ARFGEF3Q5TH69 2177 aa10.6□□□□□ -0.71
GGPS1-202ENST00000358966 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.6□□□□□ -0.71
GGPS1-202ENST00000358966 BRS3P32247 399 aa10.6□□□□□ -0.71
GGPS1-202ENST00000358966 IL13RA2Q14627 380 aa10.6□□□□□ -0.71
GGPS1-202ENST00000358966 C4orf17Q53FE4 359 aa10.6□□□□□ -0.71
GGPS1-202ENST00000358966 Q5PR19 223 aa10.6□□□□□ -0.71
GGPS1-202ENST00000358966 BTNL8Q6UX41 500 aa10.6□□□□□ -0.71
GGPS1-202ENST00000358966 ACP7Q6ZNF0 438 aa10.6□□□□□ -0.71
GGPS1-202ENST00000358966 POC1AQ8NBT0 407 aa10.6□□□□□ -0.71
GGPS1-202ENST00000358966 MRGPRDQ8TDS7 321 aa10.6□□□□□ -0.71
GGPS1-202ENST00000358966 ABHD5Q8WTS1 349 aa10.6□□□□□ -0.71
GGPS1-202ENST00000358966 RTN4IP1Q8WWV3 396 aaPredicted RBP10.6□□□□□ -0.71
GGPS1-202ENST00000358966 PLK3Q9H4B4 646 aa10.6□□□□□ -0.71
GGPS1-202ENST00000358966 GSKIPQ9P0R6 139 aa10.6□□□□□ -0.71
GGPS1-202ENST00000358966 MYO18BQ8IUG5 2567 aa10.59□□□□□ -0.71
GGPS1-202ENST00000358966 ZNF727A8MUV8 499 aa10.59□□□□□ -0.71
GGPS1-202ENST00000358966 HSD17B6O14756 317 aa10.59□□□□□ -0.71
GGPS1-202ENST00000358966 TAS2R31P59538 309 aa10.59□□□□□ -0.71
GGPS1-202ENST00000358966 ZNF146Q15072 292 aa10.59□□□□□ -0.71
GGPS1-202ENST00000358966 BATFQ16520 125 aa10.59□□□□□ -0.71
GGPS1-202ENST00000358966 ABCA11PQ4W5N1 156 aa10.59□□□□□ -0.71
GGPS1-202ENST00000358966 SPIN3Q5JUX0 258 aa10.59□□□□□ -0.71
GGPS1-202ENST00000358966 FAHD2BQ6P2I3 314 aaPredicted RBP10.59□□□□□ -0.71
GGPS1-202ENST00000358966 DUX4L9Q6RFH8 374 aaPredicted RBP10.59□□□□□ -0.71
GGPS1-202ENST00000358966 PCSK4Q6UW60 755 aa10.59□□□□□ -0.71
GGPS1-202ENST00000358966 ZNF705AQ6ZN79 300 aaPredicted RBP10.59□□□□□ -0.71
GGPS1-202ENST00000358966 SLC35G3Q8N808 338 aa10.59□□□□□ -0.71
GGPS1-202ENST00000358966 FAM169BQ8N8A8 192 aa10.59□□□□□ -0.71
GGPS1-202ENST00000358966 LINC01560Q8TB33 94 aa10.59□□□□□ -0.71
GGPS1-202ENST00000358966 Q8WTZ3 238 aa10.59□□□□□ -0.71
GGPS1-202ENST00000358966 FRZBQ92765 325 aa10.59□□□□□ -0.71
GGPS1-202ENST00000358966 FAHD2AQ96GK7 314 aa10.59□□□□□ -0.71
GGPS1-202ENST00000358966 PLPPR2Q96GM1 343 aa10.59□□□□□ -0.71
GGPS1-202ENST00000358966 METTL8Q9H825 291 aaKnown RBP10.59□□□□□ -0.71
GGPS1-202ENST00000358966 TRAPPC2LQ9UL33 140 aa10.59□□□□□ -0.71
GGPS1-202ENST00000358966 MEMO1Q9Y316 297 aa10.59□□□□□ -0.71
GGPS1-202ENST00000358966 ATP23Q9Y6H3 246 aa10.59□□□□□ -0.71
GGPS1-202ENST00000358966 MED19A0JLT2 244 aaPredicted RBP10.59□□□□□ -0.71
GGPS1-202ENST00000358966 C20orf202A1L168 122 aa10.59□□□□□ -0.71
GGPS1-202ENST00000358966 CCL21O00585 134 aa10.59□□□□□ -0.71
GGPS1-202ENST00000358966 IGHV3-13P01766 116 aa10.59□□□□□ -0.71
GGPS1-202ENST00000358966 GNRHRP30968 328 aa10.59□□□□□ -0.71
GGPS1-202ENST00000358966 TFPI2P48307 235 aa10.59□□□□□ -0.71
GGPS1-202ENST00000358966 HERV-K104P61576 105 aa10.59□□□□□ -0.71
GGPS1-202ENST00000358966 CCL8P80075 99 aa10.59□□□□□ -0.71
GGPS1-202ENST00000358966 RBPJQ06330 500 aa10.59□□□□□ -0.71
GGPS1-202ENST00000358966 KLRB1Q12918 225 aa10.59□□□□□ -0.71
GGPS1-202ENST00000358966 EDDM3AQ14507 147 aa10.59□□□□□ -0.71
GGPS1-202ENST00000358966 MEX3BQ6ZN04 569 aaKnown RBP10.59□□□□□ -0.71
GGPS1-202ENST00000358966 ZNF818PQ6ZRF7 136 aa10.59□□□□□ -0.71
GGPS1-202ENST00000358966 MOB3AQ96BX8 217 aa10.59□□□□□ -0.71
GGPS1-202ENST00000358966 HES4Q9HCC6 221 aa10.59□□□□□ -0.71
GGPS1-202ENST00000358966 DYSFO75923 2080 aa10.59□□□□□ -0.71
GGPS1-202ENST00000358966 NKX6-3A6NJ46 265 aa10.58□□□□□ -0.72
GGPS1-202ENST00000358966 TRDCB7Z8K6 153 aa10.58□□□□□ -0.72
GGPS1-202ENST00000358966 CYB5BO43169 146 aa10.58□□□□□ -0.72
GGPS1-202ENST00000358966 DFFBO76075 338 aa10.58□□□□□ -0.72
GGPS1-202ENST00000358966 AMBPP02760 352 aa10.58□□□□□ -0.72
GGPS1-202ENST00000358966 PTTG1IPP53801 180 aa10.58□□□□□ -0.72
GGPS1-202ENST00000358966 PAX5Q02548 391 aa10.58□□□□□ -0.72
GGPS1-202ENST00000358966 COL10A1Q03692 680 aa10.58□□□□□ -0.72
GGPS1-202ENST00000358966 TMEM95Q3KNT9 176 aa10.58□□□□□ -0.72
GGPS1-202ENST00000358966 CD177Q8N6Q3 437 aa10.58□□□□□ -0.72
GGPS1-202ENST00000358966 OR1L6Q8NGR2 347 aa10.58□□□□□ -0.72
GGPS1-202ENST00000358966 RNASEH2CQ8TDP1 164 aaKnown RBP10.58□□□□□ -0.72
GGPS1-202ENST00000358966 MRPL24Q96A35 216 aaKnown RBP10.58□□□□□ -0.72
GGPS1-202ENST00000358966 RRNAD1Q96FB5 475 aaKnown RBP10.58□□□□□ -0.72
GGPS1-202ENST00000358966 NUDT11Q96G61 164 aa10.58□□□□□ -0.72
GGPS1-202ENST00000358966 TP53RKQ96S44 253 aa10.58□□□□□ -0.72
GGPS1-202ENST00000358966 JKAMPQ9P055 326 aa10.58□□□□□ -0.72
GGPS1-202ENST00000358966 ZFP30Q9Y2G7 519 aa10.58□□□□□ -0.72
GGPS1-202ENST00000358966 CSMD2Q7Z408 3487 aa10.58□□□□□ -0.72
GGPS1-202ENST00000358966 CRYM-AS1A6NIL9 109 aa10.58□□□□□ -0.72
GGPS1-202ENST00000358966 SH2D1BO14796 132 aa10.58□□□□□ -0.72
GGPS1-202ENST00000358966 CCL25O15444 150 aa10.58□□□□□ -0.72
GGPS1-202ENST00000358966 TK1P04183 234 aa10.58□□□□□ -0.72
GGPS1-202ENST00000358966 CTSDP07339 412 aaPredicted RBP10.58□□□□□ -0.72
GGPS1-202ENST00000358966 IL6RP08887 468 aaPredicted RBP10.58□□□□□ -0.72
GGPS1-202ENST00000358966 TMEM108Q6UXF1 575 aa10.58□□□□□ -0.72
GGPS1-202ENST00000358966 SLC35E3Q7Z769 313 aa10.58□□□□□ -0.72
GGPS1-202ENST00000358966 GAPTQ8N292 157 aa10.58□□□□□ -0.72
GGPS1-202ENST00000358966 GCSAMQ8N6F7 178 aa10.58□□□□□ -0.72
GGPS1-202ENST00000358966 DEFB108BQ8NET1 73 aa10.58□□□□□ -0.72
GGPS1-202ENST00000358966 TNFRSF14Q92956 283 aa10.58□□□□□ -0.72
GGPS1-202ENST00000358966 RCC1LQ96I51 464 aaKnown RBP10.58□□□□□ -0.72
GGPS1-202ENST00000358966 SNX22Q96L94 193 aa10.58□□□□□ -0.72
GGPS1-202ENST00000358966 CCL28Q9NRJ3 127 aa10.58□□□□□ -0.72
GGPS1-202ENST00000358966 DECR2Q9NUI1 292 aa10.58□□□□□ -0.72
GGPS1-202ENST00000358966 TGIF2-C20orf24A0A0A6YYL0 155 aa10.57□□□□□ -0.72
GGPS1-202ENST00000358966 K7EP13 123 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms